prot_F-serratus_M_contig1022.308.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig1022.308.1
Unique Nameprot_F-serratus_M_contig1022.308.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length514
Homology
BLAST of mRNA_F-serratus_M_contig1022.308.1 vs. uniprot
Match: A0A6H5KNQ7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNQ7_9PHAE)

HSP 1 Score: 530 bits (1365), Expect = 5.430e-181
Identity = 353/607 (58.15%), Postives = 379/607 (62.44%), Query Frame = 0
Query:    1 MKGRHSSSSSESYFRAQYESVCKERDVLLGTIEAQERDIDDLKKSVYELSYMLSMQASANHA--SGSLGQTGAGPGSVDGAGVGARTSGRAVFDPRVGLTRGRSDSLNLINYEGMGIGV-GNGIASDRVLVAEAKL---------------------------------------------------------------------TVAKWDTETGQRVGGMLELEGLVQCVQMAAEGXXXXXXXXXXXXXXXXXXXXFXXLAVXXXSGAG--RVAYAGSTSKRIYTVDTRDPMSVTAKWDCGSFVNSLHVYSDGSKVLSADASGKIMTWDVRTGRVVDSYSLEGPIHISHIEASPPDAGRQDEEGLLLAANCFDNTLRVFHRRFYND--PLRHAAADTTGASTTAYAGGVTPSSPQAPTVSVSVSPSGDAGKGARGAGIGERTVTGGTREKQPSLQLMHALRGHTVQNWPIRCAFFRGLHHRPPRVRLGMFGGXXXXXXXGIRGTEG------------------MGYSDLGKDWQHSLVLATGSADGSIHVFDLSQGQGDEMQTLRGHRDRVYSADFHPTEPKLVSCSADRTVRIWLPNRKRFSRK 513
            MKG++SSSSSES+FRAQYESVCKERD L GTIEAQERDID+LKKSVYELSYMLSMQ SA  A  S SL    A PG+  G  V    S R VFDPRVGL     D+L L+N  G+G+G  G+G A+ RVLVAEAKL                                                                     TVAKWDTETGQRVG ML LEGLVQCVQ+AAEG XXXXXXXXXXXXXXXXXXX XX   XXX      RVAYAGSTSK+IYTVDTRDPM V AKW+CG+FVNSLHVYSDGSKV+SADASGKI+TWD RTG VVDSYSLE PIHISHI+ASPPDAGRQDEEGLLLAANCFDNTLRVFHRRF N                                                           G  + K+PSL+LMHALRGHTV+NWPIR     GLHHRPPRVRLG+  G    XXX                         MGY DLG DWQHSLVLATGSADGSIHVFDLS+GQGDE+QTLRGHRDRVYS DFHPTEPKLVS SAD+TV IW PNRKR SRK
Sbjct:    1 MKGKNSSSSSESFFRAQYESVCKERDALQGTIEAQERDIDELKKSVYELSYMLSMQGSAGSAPASASLAPAAARPGASTGGNVTGPPS-REVFDPRVGLATAHLDALGLMNGGGIGVGSSGSGFAAGRVLVAEAKLSGHTAAVYVAKFSPRDSLVASAGFDRTLRLWEGAYPYSQVACLEGHRQLISDLCWAPDGRSLLSASFDQTVAKWDTETGQRVGNMLSLEGLVQCVQVAAEGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRVAYAGSTSKKIYTVDTRDPMGVVAKWNCGAFVNSLHVYSDGSKVVSADASGKILTWDTRTGGVVDSYSLEDPIHISHIQASPPDAGRQDEEGLLLAANCFDNTLRVFHRRFLNSRPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEGEAKPKEPSLELMHALRGHTVKNWPIR-----GLHHRPPRVRLGLAKGGNGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXMGYKDLGNDWQHSLVLATGSADGSIHVFDLSKGQGDEIQTLRGHRDRVYSTDFHPTEPKLVSSSADKTVLIWEPNRKRNSRK 601          
BLAST of mRNA_F-serratus_M_contig1022.308.1 vs. uniprot
Match: D8LEF6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEF6_ECTSI)

HSP 1 Score: 155 bits (391), Expect = 2.510e-42
Identity = 72/82 (87.80%), Postives = 75/82 (91.46%), Query Frame = 0
Query:  432 MGYSDLGKDWQHSLVLATGSADGSIHVFDLSQGQGDEMQTLRGHRDRVYSADFHPTEPKLVSCSADRTVRIWLPNRKRFSRK 513
            MGY DLG DWQHSLVLATGSADGSIHVFDLS+GQGDE+QTL GHRDRVYSADFHPTEPKLVS SAD+TV IW PNRKR SRK
Sbjct:    1 MGYKDLGNDWQHSLVLATGSADGSIHVFDLSKGQGDEIQTLLGHRDRVYSADFHPTEPKLVSSSADKTVLIWEPNRKRNSRK 82          
BLAST of mRNA_F-serratus_M_contig1022.308.1 vs. uniprot
Match: T0QW05_SAPDV (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=T0QW05_SAPDV)

HSP 1 Score: 155 bits (391), Expect = 8.000e-38
Identity = 104/324 (32.10%), Postives = 152/324 (46.91%), Query Frame = 0
Query:  202 YAGSTSKRIYTVDTRDPMSVTAKWDCGSFVNSLHVYSDGSKVLSADASGKIMTWDVRTGRVVDSYSL---EGPIHISHIEASPPDAGRQ-DEEGLLLAANCFDNTLRVFHRRFYNDPLRHAAADTTGASTTAYAGGVTPSSPQAPTVSVSVSPSGDAGKGARGAGIGERTVTGGTREKQPSLQLMHALRGHTVQNWPIRCAFFRGLHHRPPRVRLGMFGGXXXXXXXGIRGTEGMGYSD--LGKDWQHSLVLATGSADGSIHVFDLS-------QGQGDEMQTLRGHRDRVYSADFHPTEPKLVSCSADRTVRIWLPNRKRFSR 512
            + G++ K ++ +D R    + + W   + VNSL+V SDG ++++ D+ G + TWDVR G+V+D  S    +G   ISH+ ASP   GR  DE+G  LA N +DN LRV+ R               G+   +   GV P                                          +QL + + GH  +NWPI+ +FFRG  +     +L +               E +GY D  L +     ++LATGSAD +I++ D++        G    +Q L GH DRVYS DFHP+EP L S SAD TV+IWLP   R ++
Sbjct:  235 FIGTSQKSVHVLDVR--AGLASSWAHDAMVNSLYVTSDGQQLITGDSKGWVKTWDVRAGKVIDDLSQLNDDGHHAISHVHASPAGDGRGGDEDGRYLAVNSYDNLLRVYDR---------------GSKLISNTQGVDP------------------------------------------MQLSYFVAGHKNKNWPIKSSFFRGEGNT---YKLSLPSNRFPKRKLTDGDNEDLGYQDRELQEKPDEVMLLATGSADNTIYLHDVTCRRGYGLNGSTSLLQRLEGHTDRVYSVDFHPSEPILASASADFTVKIWLPRTSRLNK 496          
BLAST of mRNA_F-serratus_M_contig1022.308.1 vs. uniprot
Match: A0A835Z281_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z281_9STRA)

HSP 1 Score: 142 bits (359), Expect = 3.620e-37
Identity = 67/115 (58.26%), Postives = 82/115 (71.30%), Query Frame = 0
Query:  398 AFFRGLHHRPPRVRLGMFGGXXXXXXXGIRGTE-----GMGYSDLGKDWQHSLVLATGSADGSIHVFDLSQGQGDEMQTLRGHRDRVYSADFHPTEPKLVSCSADRTVRIWLPNR 507
            AFF+GL HR PR+R    G        G R        G+GY D GKDW HSLVLATGSADG+I+ FD+S+G+G ++QTLRGH DRVY+  FHPTEP+LVS SAD+TVRIW P++
Sbjct:    2 AFFKGLQHRTPRMRRAAAGNSAGGSAHGRRAAAESVGGGIGYEDSGKDWAHSLVLATGSADGNIYTFDMSKGEGGDLQTLRGHNDRVYAVHFHPTEPRLVSGSADQTVRIWGPSK 116          
BLAST of mRNA_F-serratus_M_contig1022.308.1 vs. uniprot
Match: A0A5D6XXH4_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XXH4_9STRA)

HSP 1 Score: 143 bits (360), Expect = 8.270e-34
Identity = 101/314 (32.17%), Postives = 137/314 (43.63%), Query Frame = 0
Query:  202 YAGSTSKRIYTVDTRDPMSVTAKWDCGSFVNSLHVYSDGSKVLSADASGKIMTWDVRTGRVVDSYSL---EGPIHISHIEASPPDAGRQ-DEEGLLLAANCFDNTLRVFHRRFYNDPLRHAAADTTGASTTAYAGGVTPSSPQAPTVSVSVSPSGDAGKGARGAGIGERTVTGGTREKQPSLQLMHALRGHTVQNWPIRCAFFRGLHHRPPRVRLGMFGGXXXXXXXGIRGTEGMGYSDLGKDWQHSLVLATGSADGSIHVFDLSQGQGDE------MQTLRGHRDRVYSADFHPTEPKLVSCSADRTVRIWLP 505
            + G++   I+ VD+R    V   W   + VNSL+V  DG  +++ D+ G + TWDVR    +D  S     G   ISHI ASPP  GR+ DE+G  LAAN +DN LRV+ RR       H                                                          Q  +QL  ++ GH  +NWPI+ AFFRG      + +L +               E    +D     Q +L+LATGSAD  I++ D+S    +       +Q +  H DRVY  DFHPTEP L S SAD +V+IWLP
Sbjct:  196 FFGTSKSCIHQVDSR--ADVVRSWQNDAMVNSLYVSPDGQFIVTGDSKGMLKTWDVRMDACIDDISKLNDPGRHAISHIHASPPVDGRRGDEDGRFLAANSYDNLLRVYDRRSKLISSSHG---------------------------------------------------------QEQMQLSFSVTGHKNKNWPIKSAFFRG---EGDKYKLMLPSNRHAQRKLTDGDGEDFQDTDRPDTTQETLLLATGSADNKIYLHDVSLKHPNARPAPYLVQKIDAHSDRVYCVDFHPTEPILASASADFSVKIWLP 447          
BLAST of mRNA_F-serratus_M_contig1022.308.1 vs. uniprot
Match: A0A8K1CHV1_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CHV1_PYTOL)

HSP 1 Score: 142 bits (359), Expect = 1.640e-33
Identity = 119/398 (29.90%), Postives = 157/398 (39.45%), Query Frame = 0
Query:  123 SDRVLVAEAKLTVAKWDTETGQRVGGMLELEGLVQCVQMAAEGXXXXXXXXXXXXXXXXXXXXFXXLAVXXXSGAGRVAYAGSTSKRIYTVDTRDPM---SVTAKWDCGSFVNSLHVYSDGSKVLSADASGKIMTWDVRTGRVVDSYSLE---GPIHISHIEASPPDAGRQ-DEEGLLLAANCFDNTLRVFHRR--FYNDPLRHAAADTTGASTTAYAGGVTPSSPQAPTVSVSVSPSGDAGKGARGAGIGERTVTGGTREKQPSLQLMHALRGHTVQNWPIRCAFFRGLHHRPPRVRLGMFGGXXXXXXXGIRGTEGMGYSDLGKDWQHSLVLATGSADGSIHVFDLSQGQGDE------MQTLRGHRDRVYSADFHPTEPKLVSCSADRTVRIWLP 505
            S  ++ A    TV  WD E  Q +    E+ GLVQCV                                          + G++   I+ VD+R  +   S    W   + VNSL+V  DG  V++ D+ G I TWDVR    ++  S E   G   ISHI ASPP  GR  DE+G  LAAN +DN LRV+ RR       L H                                                             +QL   + GH  +NWPI+ +FFRG  ++    +L +               E    SD     Q +L+LATGSAD  I++ D+S   G        +Q +  H DRVY  DFHPTEP L S SAD +V+IWLP
Sbjct:  170 SSTLVSASYDHTVKLWDVEKSQ-LQASSEVPGLVQCVSFNLADNNQY--------------------------------FMGTSKSAIHMVDSRADVCRWSDCVTWQNDAMVNSLYVSPDGQFVVTGDSKGMIKTWDVRMESCIEDISRENDPGRHAISHIHASPPVDGRGGDEDGRFLAANSYDNILRVYDRRSKLIGSSLGH-----------------------------------------------------------DQMQLSFFVTGHKNKNWPIKSSFFRGEGYK---YKLLLPANRHTQRKLTDGDNEDFQDSDRADTPQETLLLATGSADNKIYLHDVSLKHGSARPSPYLIQKIDAHSDRVYCVDFHPTEPILASASADFSVKIWLP 472          
BLAST of mRNA_F-serratus_M_contig1022.308.1 vs. uniprot
Match: A0A2D4BDQ6_PYTIN (Uncharacterized protein (Fragment) n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BDQ6_PYTIN)

HSP 1 Score: 139 bits (351), Expect = 1.800e-32
Identity = 117/406 (28.82%), Postives = 161/406 (39.66%), Query Frame = 0
Query:  123 SDRVLVAEAKLTVAKWDTETGQRVGGMLELEGLVQCVQMAAEGXXXXXXXXXXXXXXXXXXXXFXXLAVXXXSGAGRVAYAGSTSKRIYTVDTRDPMSVTAKWDCGSFVNSLHVYSDGSKVLSADASGKIMTWDVRTGRVVDSYSLE---GPIHISHIEASPPDAGRQ-DEEGLLLAANCFDNTLRVFHRRFYNDPLRHAAADTTGASTTAYAGGVTPSSPQAPTVSVSVSPSGDAGKGARGAGIGERTVTGGTREKQPSLQLMHALRGHTVQNWPIRCAFFRGLHH---------RPPRVRLGMFGGXXXXXXXGIRGTEGMGY----SDLGKDWQHSLVLATGSADGSIHVFDLS------QGQGDEMQTLRGHRDRVYSADFHPTEPKLVSCSADRTVRIWLP 505
            S +++ A    TV  WD E    +    E+ GLVQCV                                          + G++   I+ +D+R    V  KW   + VNSL+V  DG  V++ D+ G I TWDVR    ++  S +   G   ISHI ASPP  GR  DE+G  LAAN +DN LRV+ RR       H                                                             +QL   + GH  +NWPI+ +FFRG  +         R P+ +L                T+G G     SD     + +L+LATGSAD  I++ ++S      + Q   +Q +  H DRVY  DFHP+EP L S SAD +V+IWLP
Sbjct:  165 SSKLVSASYDHTVKLWDVEKSSLLHSA-EVPGLVQCVSF--------------------------------NMADNNQYFLGTSKNAIHMMDSR--AEVCRKWQNNAMVNSLYVSPDGQFVITGDSRGMIKTWDVRMESCIEDISRQNDPGNHAISHIHASPPVDGRSGDEDGRFLAANSYDNILRVYDRRSKLISSSHG---------------------------------------------------------HDQMQLSFFVTGHKNKNWPIKSSFFRGEGYKYKLMLPANRHPQRKL----------------TDGDGEDYQDSDRSDSSKETLLLATGSADNKIYLHEISMKNTSARPQPYLVQKIDAHSDRVYCVDFHPSEPILASASADFSVKIWLP 462          
BLAST of mRNA_F-serratus_M_contig1022.308.1 vs. uniprot
Match: A0A507DDC3_9FUNG (Uncharacterized protein n=1 Tax=Synchytrium endobioticum TaxID=286115 RepID=A0A507DDC3_9FUNG)

HSP 1 Score: 139 bits (351), Expect = 2.810e-32
Identity = 92/314 (29.30%), Postives = 144/314 (45.86%), Query Frame = 0
Query:  200 VAYAGSTSKRIYTVDTRDPMSVTAKWDCGSFVNSLHVYSDGSKVLSADASGKIMTWDVRTGRVVDSYSLEGPIH-ISHIEASP--PDAGRQDEEGLL-----LAANCFDNTLRVFHRRFYNDPLRHAAADTTGASTTAYAGGVTPSSPQAPTVSVSVSPSGDAGKGARGAGIGERTVTGGTREKQPSLQLMHALRGHTVQNWPIRCAFFRGL-HHRPPRVRLGMFGGXXXXXXXG-IRGTEGMGYSDLGKDWQHSLVLATGSADGSIHVFDLSQGQGDEMQTLRGHRDRVYSADFHPTEPKLVSCSADRTVRIW 503
            V ++G++   +Y VD R P  V    +  + +NSL+VY +G  V+SAD+SG + TWDVRTGRV+D+   E     ISHI   P  PD    D++  +     +A N +DN +R++ R +                                                                  P  +++H+L+G+  +NWPI+ +FF G  HHRP      M          G +   + +  +      +  ++LATGSAD  ++V+ +++   D++Q L GH DRVY+  FHP EP L SCSAD ++R+W
Sbjct:  248 VFFSGTSRNALYIVDRRKPEHVAVLRN-DAMINSLYVYRNGLTVMSADSSGCLKTWDVRTGRVLDTIVNEPSRKPISHIAWCPFTPDTDAVDDDPAVHEPRYVAINSYDNVIRIYDRAY----------------------------------------------------------------DVPQPKVVHSLKGYKNKNWPIKSSFFAGSPHHRPHPYDWRMGSHDELVYNGGEVALNDVLLPTTSSSPDEKEILLATGSADPYVYVYSITESSADQIQRLEGHTDRVYAVSFHPFEPVLASCSADFSIRVW 496          
BLAST of mRNA_F-serratus_M_contig1022.308.1 vs. uniprot
Match: D7FIJ7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIJ7_ECTSI)

HSP 1 Score: 126 bits (317), Expect = 1.020e-30
Identity = 84/137 (61.31%), Postives = 95/137 (69.34%), Query Frame = 0
Query:    1 MKGRHSSSSSESYFRAQYESVCKERDVLLGTIEAQERDIDDLKKSVYELSYMLSMQASANHA--SGSLGQTGAGPGSVDGAGVGARTSGRAVFDPRVGLTRGRSDSLNLINYEGMGIGVGNGIA--SDRVLVAEAKL 133
            MK ++SSSSSES+FRAQYESVCKERD L GTIEAQERDID+LKKSVYELSYMLSMQ SA  A  S SL        +  G  V    S R VFDPRVG+     DSL L+N  G+ +G  NGI   + R+LVAEAKL
Sbjct:    1 MKSKNSSSSSESFFRAQYESVCKERDALQGTIEAQERDIDELKKSVYELSYMLSMQGSAGSAPASASLXXXXXXXXAATGGNVTGPPS-RKVFDPRVGIATAHLDSLGLMNGGGIRVG-SNGIRIPAGRILVAEAKL 135          
BLAST of mRNA_F-serratus_M_contig1022.308.1 vs. uniprot
Match: A0A507BZD8_9FUNG (Uncharacterized protein n=1 Tax=Synchytrium microbalum TaxID=1806994 RepID=A0A507BZD8_9FUNG)

HSP 1 Score: 122 bits (307), Expect = 1.490e-26
Identity = 90/287 (31.36%), Postives = 131/287 (45.64%), Query Frame = 0
Query:  229 SFVNSLHVYSDGSKVLSADASGKIMTWDVRTGRVVDSYSLE-GPIHISHIEASPPD--AGRQDE---EGLLLAANCFDNTLRVFHRRFYNDPLRHAAADTTGASTTAYAGGVTPSSPQAPTVSVSVSPSGDAGKGARGAGIGERTVTGGTREKQPSLQLMHALRGHTVQNWPIRCAFFRGLHHR--PPRVRLGMFGGXXXXXXXGIRGTEGMGYSDLGKDWQHSLVLATGSADGSIHVFDLSQGQGDEMQTLRGHRDRVYSADFHPTEPKLVSCSADRTVRIWLPNR 507
            + +NSL+VY +G  V+SAD+ G + TWD+RTG+ +D+   E     ISH+   P    AG +D+   E   +A N +DN LRV+ R  Y+ P                                                             QP  Q+ H+L+G+  +NWPI+ +FF G  HR  P   R+G               TE    +DL    + +L LATGSAD  I V+ +++   +++Q L GH DRVY+  FHP E  L SCSAD ++R+W  +R
Sbjct:  251 AMINSLYVYRNGLYVISADSLGCLKTWDIRTGKCIDTIVNEPSKKPISHVSWCPVSSTAGEEDDSRQEPRYIATNSYDNVLRVYDRG-YDAP-----------------------------------------------------------NSQP--QVAHSLKGYKNKNWPIKSSFFVGNSHRHHPYDWRVGSHDEMV------YNATES---ADLEVPEKETL-LATGSADPYIFVYSITESSAEQIQRLEGHTDRVYAVSFHPFEAILASCSADFSIRVWYSSR 465          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1022.308.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KNQ7_9PHAE5.430e-18158.15Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LEF6_ECTSI2.510e-4287.80Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
T0QW05_SAPDV8.000e-3832.10Uncharacterized protein n=2 Tax=Saprolegnia TaxID=... [more]
A0A835Z281_9STRA3.620e-3758.26Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A5D6XXH4_9STRA8.270e-3432.17Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
A0A8K1CHV1_PYTOL1.640e-3329.90Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A2D4BDQ6_PYTIN1.800e-3228.82Uncharacterized protein (Fragment) n=1 Tax=Pythium... [more]
A0A507DDC3_9FUNG2.810e-3229.30Uncharacterized protein n=1 Tax=Synchytrium endobi... [more]
D7FIJ7_ECTSI1.020e-3061.31Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A507BZD8_9FUNG1.490e-2631.36Uncharacterized protein n=1 Tax=Synchytrium microb... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 218..256
e-value: 3.3
score: 13.7
coord: 465..504
e-value: 9.3E-9
score: 45.1
coord: 378..460
e-value: 1.4
score: 16.1
IPR001680WD40 repeatPFAMPF00400WD40coord: 467..503
e-value: 3.4E-7
score: 30.8
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 231..265
score: 8.537
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 472..503
score: 14.017
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 439..512
e-value: 4.4E-18
score: 67.2
NoneNo IPR availablePANTHERPTHR44006FAMILY NOT NAMEDcoord: 199..272
NoneNo IPR availablePANTHERPTHR44006FAMILY NOT NAMEDcoord: 448..503
NoneNo IPR availablePANTHERPTHR44006:SF1U5 SMALL NUCLEAR RIBONUCLEOPROTEIN 40 KDA PROTEINcoord: 199..272
coord: 448..503
IPR017986WD40-repeat-containing domainPROSITEPS50294WD_REPEATS_REGIONcoord: 447..513
score: 14.503
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 133..503

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1022contigF-serratus_M_contig1022:270958..294056 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1022.308.1mRNA_F-serratus_M_contig1022.308.1Fucus serratus malemRNAF-serratus_M_contig1022 270629..294107 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig1022.308.1 ID=prot_F-serratus_M_contig1022.308.1|Name=mRNA_F-serratus_M_contig1022.308.1|organism=Fucus serratus male|type=polypeptide|length=514bp
MKGRHSSSSSESYFRAQYESVCKERDVLLGTIEAQERDIDDLKKSVYELS
YMLSMQASANHASGSLGQTGAGPGSVDGAGVGARTSGRAVFDPRVGLTRG
RSDSLNLINYEGMGIGVGNGIASDRVLVAEAKLTVAKWDTETGQRVGGML
ELEGLVQCVQMAAEGGETEGGMGEGVGIAGNVADAFAGLAVGGGSGAGRV
AYAGSTSKRIYTVDTRDPMSVTAKWDCGSFVNSLHVYSDGSKVLSADASG
KIMTWDVRTGRVVDSYSLEGPIHISHIEASPPDAGRQDEEGLLLAANCFD
NTLRVFHRRFYNDPLRHAAADTTGASTTAYAGGVTPSSPQAPTVSVSVSP
SGDAGKGARGAGIGERTVTGGTREKQPSLQLMHALRGHTVQNWPIRCAFF
RGLHHRPPRVRLGMFGGGPPGGGGGIRGTEGMGYSDLGKDWQHSLVLATG
SADGSIHVFDLSQGQGDEMQTLRGHRDRVYSADFHPTEPKLVSCSADRTV
RIWLPNRKRFSRK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001680WD40_repeat
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR017986WD40_repeat_dom
IPR036322WD40_repeat_dom_sf