mRNA_F-serratus_M_contig1429.3059.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig1429.3059.1
Unique NamemRNA_F-serratus_M_contig1429.3059.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
BLAST of mRNA_F-serratus_M_contig1429.3059.1 vs. uniprot
Match: D7FS84_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FS84_ECTSI)

HSP 1 Score: 213 bits (541), Expect = 4.970e-64
Identity = 115/304 (37.83%), Postives = 180/304 (59.21%), Query Frame = 1
Query:   25 MVKSGGTTIKGLLHRFTERSSTRRSEYANAMWLKGDQGTRLAENIFTSVDGIIYGGYAEALRPIRDSG--NCRWFTIFRHPVPRLVSAFFYCKYMNRKDPLCAQDTIDL--DTVDLLSFAEHWGNYGLRQYALGFLSNEEILTSPFARECT----------NCPAWYIVKQHLQS-LHQQTPNNATGVF--SNASPTDEYSLHAILEPALEVISSRYTAVGILEDMTTTMRLFDSALGMNHFNWTVETQNLRAKNEDLKRKSEEHAILHEAWTNPAIIRFISLDLTLYEYATKIYAKQLEQYGL 885
            M K+GG+T+K +L  +T+  +     Y +  WL+G      A++     + +++G Y E LRP    G   C+WFTIFRHP+PRLVSA+FYCK    +D LCA   +D   D  DL +FAEHWG++GLRQ+AL F+  EE+L +    + T          +CP WY +K +LQ  L +Q     +  +  S A+ +   ++  +L+P  E++++ Y AVG+LE   T++ LF+ ALGM  F+W     ++  KN D    +EE  +L  +WT+P + R++SLDL LY+YA  ++ +Q+++YGL
Sbjct:    1 MNKAGGSTVKYMLAPWTKAQNVTVGLYDSPQWLEGKD---FAQDFLGDENSLMWGAYTEGLRPFGGLGLRECKWFTIFRHPIPRLVSAYFYCK-KKPQDGLCATVALDANADDTDLYAFAEHWGDFGLRQFALAFVLPEELLANKVKYDATGICTPYHGKRSCPGWYELKLYLQQQLDEQEQGEGSRGWDGSGAAASGAATISHLLQPVQELLTNEYAAVGVLEQWETSLLLFNEALGMPGFDWPETFGSIGKKNSDGTFHNEEAEMLLRSWTDPRLRRYLSLDLLLYDYAVSVHNQQVDKYGL 300          
BLAST of mRNA_F-serratus_M_contig1429.3059.1 vs. uniprot
Match: D7G715_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G715_ECTSI)

HSP 1 Score: 203 bits (517), Expect = 2.600e-59
Identity = 125/325 (38.46%), Postives = 177/325 (54.46%), Query Frame = 1
Query:    4 RCWVFHHMVKSGGTTIKGLLHRFTERSSTRRSEYANAMWLKGDQGTRLAENIFTSVDG-----IIYGGYAEALR------PIRDSGNCRWFTIFRHPVPRLVSAFFYCKYMNRKDPLCAQDTIDLDTVDLLSFAEHWGNYGLRQYALGFLSNEEI---LTSP--------FARECTNCPAWYIVKQHLQSLHQQTPNNATGVFSNASPTDEYSLHAILEPALEVISSRYTAVGILEDMTTTMRLFDSALGMNHFNWTVETQNLRAKNEDLKRKSEEHAILHEAWTNPAIIRFISLDLTLYEYATKIYAKQLEQYG------LDNI 894
            RCW+F+H+ K+GGTT+K LL       ST    Y +  W KG QG   AE++  S+          GGY EALR      P  +   CRWFT+FRHPV RLVSA++YC+  +  D LCA + +    VDL++FA HWGN+ LRQ+ALGF+S++++   L SP         A +    P WY++K  L        N+ +GV  + SP +   L  +  P ++++   Y  VGILED   T+ LFDSAL M    W  E +     N D + K E+  +L +A ++P I++ +SLDL LY  A  I+ +Q   YG      LDN+
Sbjct:   87 RCWIFNHLQKAGGTTVKRLLFDSWGSEST---TYDSYQWKKG-QG--YAESVAASLASPAGWSAAAGGYLEALRRTPAFQPDDERTPCRWFTVFRHPVSRLVSAYYYCRE-DPSDQLCASEFVSSRNVDLVTFARHWGNFALRQFALGFVSHDKVKDFLVSPNGGGAMGLTAEQVELMPGWYMLKLFL--------NDRSGVADDTSP-EGTRLEYMFRPVVDLLRDNYAVVGILEDWNATLSLFDSALDMPGMTWREEFERSGKLNVDTRFKGEKQDVLQQALSDPEIVKHLSLDLRLYGQAVDIFNQQRHSYGIAQHGGLDNV 395          
BLAST of mRNA_F-serratus_M_contig1429.3059.1 vs. uniprot
Match: A0A6H5JY77_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JY77_9PHAE)

HSP 1 Score: 196 bits (498), Expect = 4.050e-57
Identity = 112/304 (36.84%), Postives = 159/304 (52.30%), Query Frame = 1
Query:    7 CWVFHHMVKSGGTTIKGLLHRFTERSSTRRSEYANAMWLKGDQGTRLAENIFTSVDGIIYGGYAEALRPIRDSGNCRWFTIFRHPVPRLVSAFFYCKYMNRKDPLCAQDTIDLDTVDLLSFAEHWGNYGLRQYALGFLSNEEI----LTSPFARECTN-----CPAWYIVKQHLQSLHQQTPNNATGVFSNASPTD-EYSLHAILEPALEVISSRYTAVGILEDMTTTMRLFDSALGMNHFNWTVETQNLRAKNEDLKR-KSEEHAILHEAWTNPAIIRFISLDLTLYEYATKIYAKQLEQYGL 885
            CWVF HM KSGG T++ ++  F        + + +  W     G   AE          YGGY E LR + D  +C+WFT+FRHPV R+VSA+FYC+  +  D LCA   +D   VDLL+FAEHWGNYGLRQ+AL  +  E++    + S F ++         PAWY  K +L   HQ              PT  E  L   L  A E +S+RY AVGI+E+   +M LF+  L +  F+W  E Q    KN    + ++   + L  AW +P + +FI LD+ LY++A  ++  Q+   G+
Sbjct:   52 CWVFSHMNKSGGMTVRKMIMPFLTEKGVSTALFDDIEW---SSGRSYAETFVKENAVFTYGGYTEGLR-MYDDRDCKWFTVFRHPVSRVVSAYFYCQRAHH-DQLCAAVVLDASKVDLLTFAEHWGNYGLRQFALASIKAEDVFHNEVVSEFCQQARGHGDVCIPAWYRQKHYLHLPHQD---------DFCGPTQPESGLAQFLSSAQETLSTRYAAVGIIEEWDNSMELFNRVLNLRRFDWVKEFQKSGKKNSGGSQFETASKSALKAAWHSPELKKFIWLDILLYDHALSVHRSQVADLGI 341          
BLAST of mRNA_F-serratus_M_contig1429.3059.1 vs. uniprot
Match: A0A6H5JNJ0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNJ0_9PHAE)

HSP 1 Score: 192 bits (488), Expect = 7.310e-56
Identity = 115/296 (38.85%), Postives = 167/296 (56.42%), Query Frame = 1
Query:    7 CWVFHHMVKSGGTTIKGLLHRFTERSSTRRSEYANAMWLKGDQGTRLAENIFTSVDGIIYGGYAEALRPIRDSGNCRWFTIFRHPVPRLVSAFFYCKYMNRKDPLCAQDTIDLDTVDLLSFAEHWGNYGLRQYALGFLSNEEILTSPFARECTNCPAWYIVKQHLQSLHQQTPNNATGVFSNASPTDEYS---LHAILEPALEVISSRYTAVGILEDMTTTMRLFDSALGMNHFNWTVETQNLRAKNEDLKRKSEEHAILHEAWTNPAIIRFISLDLTLYEYATKIYAKQLEQYGL 885
            CWVF H  K+GGTT+K  L  + E  +   +   +  + +GD+G    +++      +I GGYAE LR     G C+WFT+ RHP+ RL+SAF+YC   NR D LCA +    +  D+  FA+HWGNY L Q+ALG +   EI    FA E  + PAW+  K + +       N +T   +N +  DE+    +  IL+P  E++ S Y AVGILE    +M LFD AL +  FNWTV + +L  +    K   E+ A+L  A T+P + +++ LDL LYEYA  ++ +QL +Y L
Sbjct:   37 CWVFTHNNKAGGTTVKTHLRNYAESRNETVALCHSDWYARGDKGI---QDLLNDKPVLIAGGYAEGLRTSAFQG-CKWFTMMRHPIARLISAFYYCSGGNR-DQLCAANIHKPEDGDIYDFAKHWGNYALLQFALGVVDQHEI----FAEE-VDAPAWFKAKLYFEGRLGYPGNMSTA--TNRTTHDEWQSVWIPDILQPVEELLRSNYAAVGILEHWQRSMMLFDHALEIPGFNWTVASASLSPRKSQNKIV-EKKAMLAAAMTDPVLRQYVWLDLLLYEYACSLHEEQLRRYDL 319          
BLAST of mRNA_F-serratus_M_contig1429.3059.1 vs. uniprot
Match: D7FWQ3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWQ3_ECTSI)

HSP 1 Score: 196 bits (497), Expect = 1.090e-55
Identity = 118/315 (37.46%), Postives = 177/315 (56.19%), Query Frame = 1
Query:    4 RCWVFHHMVKSGGTTIKGLLHRFTERSSTRRSEYANAMWLKGDQ-----GTRLAENIFTSVDGIIYGGYAEALR---PIRDSGNCRWFTIFRHPVPRLVSAFFYCKYMNRKDPLCAQDTIDLDTVDLLSFAEHWGNYGLRQYALGFLSNE---EILTSPFAR-----ECTNCPAWYIVKQHLQSLHQQT-----PNNATGVFSNASPTDEYSLHAILEPALEVISSRYTAVGILEDMTTTMRLFDSALGMNHFNWTVETQNLRAKNEDLKRKSEEHAILHEAWTNPAIIRFISLDLTLYEYATKIYAKQLEQYGL 885
            +CWVF H+ K GG+T+K +L R      +R S Y +  W  GD      G +LA         ++ GGY EALR   P+ D+G CR+FT+FRHP+ R+VSA+FYC+     D  CA + +D   VDLL+FA+HWGN+ +RQ+ALGF+ ++   E + +P A+     +      WY +K +L+   +        + A  V  +A+ T E  L+ +L+PA+++I S Y AVGILE   TT+ LFD AL +    W  +      +  D K K  E   L +AWT+  + +++ LDL LYE+A  ++ +Q   YGL
Sbjct:  155 QCWVFMHLQKCGGSTVKYMLRR---SYGSRYSIYDSNQWKLGDDISANFGVKLARG---ETWNVMAGGYTEALRRSEPV-DAG-CRFFTLFRHPIARMVSAYFYCR-STLGDAACASEVVDAKDVDLLTFAKHWGNFAVRQFALGFVPSDGVQEYIRTPEAQALHDFDLKKIAGWYQLKMYLERPEKGDWGVPGQSEAMTVEHDAAATLEAPLYDLLQPAMDLIRSGYVAVGILEQWNTTLHLFDHALEIPGMYWGAQFAEGGKQRVDYKNKRLESETLKQAWTDSELKKYMRLDLLLYEHAVDVFHEQARGYGL 460          
BLAST of mRNA_F-serratus_M_contig1429.3059.1 vs. uniprot
Match: D7G716_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G716_ECTSI)

HSP 1 Score: 189 bits (480), Expect = 3.480e-53
Identity = 108/305 (35.41%), Postives = 168/305 (55.08%), Query Frame = 1
Query:    4 RCWVFHHMVKSGGTTIKGLLHRFTERSSTRRSEYANAMWLKGDQ-----GTRLAENIFTSVDGIIYGGYAEALRPIRDSG-NCRWFTIFRHPVPRLVSAFFYCKYMNRKDPLCAQDTIDLDTVDLLSFAEHWGNYGLRQYALGFLSNEEILTSPFARECTNCPAWYIVKQHLQSLHQQT-----PNNATGVFSNASPTDEYSLHAILEPALEVISSRYTAVGILEDMTTTMRLFDSALGMNHFNWTVETQNLRAKNEDLKRKSEEHAILHEAWTNPAIIRFISLDLTLYEYATKIYAKQLEQYGL 885
            +CWVF H+ K GG+T+K LL    +R  +R   Y +  W  GD+     G +LA         ++ GGY EALR     G  CR+FT+FRHP+ R+VSA+FYC+ ++  D  CA + +    VDLL+FA+HWGN+ LRQ+ALGF+ ++++               Y +K +L+   ++         A     +A+ T +  L+ +L+PA++++   Y AVGILE   TT+RLFD  L M   NW  +       + D+  K  E   L +AWT+  + +++ LDL LYE+A  ++ +Q   +GL
Sbjct:  176 QCWVFMHLQKCGGSTVKDLLE---DRWGSRFFIYDSMRWKFGDEFSAKFGAKLA---LGDKWNVMTGGYTEALRLSEPVGAGCRFFTLFRHPIARMVSAYFYCRSVSG-DVACASEVMQAKDVDLLTFAKHWGNFALRQFALGFVPSDDVQE-------------YQLKMYLERPQKEDGGVLGQREAMTAHQDAAATPDAPLYELLQPAMDLVRDGYVAVGILEQWNTTLRLFDHTLDMPVMNWEEQFAESGKHHVDIVNKQLEIETLQQAWTDSELKKYMRLDLLLYEHAVDVFHQQARSHGL 460          
BLAST of mRNA_F-serratus_M_contig1429.3059.1 vs. uniprot
Match: A0A6H5JQY7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQY7_9PHAE)

HSP 1 Score: 182 bits (463), Expect = 3.740e-52
Identity = 106/297 (35.69%), Postives = 161/297 (54.21%), Query Frame = 1
Query:    7 CWVFHHMVKSGGTTIKGLLHRFTERSSTRRSEYANAMWLKGDQGTRLAENIFTSVDGIIYGGYAEALRPIRDSGNCRWFTIFRHPVPRLVSAFFYCKYMNRKDPLCAQDTIDLDTVDLLSFAEHWGNYGLRQYALGFLSNEEILTSPFARECTNCPAWYIVKQHLQSLHQQTPNNATGVFSNASPTDEYS---LHAILEPALEVISSRYTAVGILEDMTTTMRLFDSALGMNHFNWTVETQNLRAKN-EDLKRKSEEHAILHEAWTNPAIIRFISLDLTLYEYATKIYAKQLEQYGL 885
            CWV+  M K+GGT+I+ ++  +   ++T   E+ +  +  GD+G    + I      +I+G Y E LRP      C+WFT+ RHP+ RLVSAF YC  +   D LCA      +  D+  FAEHWGN+G+ Q+AL F    +IL +         P WY  K + +   +  P+  T   +N S  D      +  IL+P  E++ S+Y AVGILE   T+M LFD AL +  FNWT  + +   +N  D K K++   +L  + T+P + + + LD+ LYE+A  ++  QL +YGL
Sbjct:   37 CWVYTDMNKAGGTSIRRMIKDYAAATNTTVGEFTHTQYNAGDRGV---QQILDRRPSLIWGAYTEGLRPYATVLGCKWFTMVRHPIARLVSAFNYCGIVP-SDQLCATRIHKPEDGDIYDFAEHWGNHGVVQFALAFEDLNDILVTE-----VKSPPWYKAKLYFEG--RLGPSGKTSTSANISTKDVCQNVWMPEILQPVEELLRSKYAAVGILEQWETSMMLFDHALQLPGFNWTSTSASSTPRNVHDSKAKND---LLVASMTDPVLKQILWLDILLYEHACSVHKAQLSRYGL 319          
BLAST of mRNA_F-serratus_M_contig1429.3059.1 vs. uniprot
Match: A0A6H5L061_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L061_9PHAE)

HSP 1 Score: 155 bits (391), Expect = 1.740e-42
Identity = 78/216 (36.11%), Postives = 126/216 (58.33%), Query Frame = 1
Query:  250 FRHPVPRLVSAFFYCKYMNRKDPLCAQDTIDLDTVDLLSFAEHWGNYGLRQYALGFLSNEEILTSPFARECTN----CPAWYIVKQHLQSLHQQTPNNATGVFSNASPTDEYSLHAILEPALEVISSRYTAVGILEDMTTTMRLFDSALGMNHFNWTVETQNLRAKNEDLKRKSEEHAILHEAWTNPAIIRFISLDLTLYEYATKIYAKQLEQYGL 885
            ++ P+PRLVSA+FYCK  N  D LCA   +     DL +FA+HWGNYGLRQ++L F+  E++  +   R         P WY VK++ ++        A  +      +++ ++  +L+P  +++S  Y+AVGILE   T+M LF+ AL +  FNW   ++NL  KN D +   EE   L  AW +P + + + LD+ LY++A  ++ KQ+E++G+
Sbjct:   18 YKCPIPRLVSAYFYCK-QNGWDELCASMVLKAGNTDLHTFAKHWGNYGLRQFSLAFVGAEDVFAAEQERGIDGRPVMFPGWYRVKEYFENQFDVEQERA--LMQETGASNDLAMSYLLQPVEDLLSRNYSAVGILEKWETSMTLFNKALKVPSFNWQTASRNLGRKNVDKRLHDEEAHALRAAWDDPVLAKTLWLDIFLYDHAVAVHNKQVEEHGI 230          
BLAST of mRNA_F-serratus_M_contig1429.3059.1 vs. uniprot
Match: A0A6H5JQM0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQM0_9PHAE)

HSP 1 Score: 156 bits (394), Expect = 4.430e-40
Identity = 96/299 (32.11%), Postives = 158/299 (52.84%), Query Frame = 1
Query:    7 CWVFHHMVKSGGTTIKGLLHRFTERSSTRRSEYANAMWLKGDQGTRLAENIFTSVDGIIYGGYAEALRPIRDSGNCRWFTIFRHPVPRLVSAFFYCKYMNRKDPLCAQDTIDLDTVDLLSFAEHWGNYGLRQYALGFLSNEEILTSPFAREC-TNCPAWYIVKQHLQSLHQQTPNNATGVFSNASPTDEYSLHAILEPALEVISSRYTAVGILEDMTTTMRLFDSALGMNHFNWTVETQNLRAKNEDLKRKSE----EHAILHEAWTNPAIIRFISLDLTLYEYATKIYAKQLEQYGLD 888
            CW+F HM KSG +  + +    TER       +    W +GD     A ++  S   +++GG  E+LR  ++  +C+W TIFRHP+ RL+SA+ +C     KDP+C       ++  L+ FAE WGN+ +RQ+AL  +S   +      R+  T    WY+VK++L               +     ++  L ++LEP   ++S++Y AVGI +++ TTM LF  AL M   +W+     L   NE++K+ SE    E     +A  NP I+  + LD++LYE+A  ++  Q+ Q+G++
Sbjct:  273 CWIFMHMDKSGASGARRVA---TERWRKDELVFDTVQWRRGDG---FAADVMASHWKLLHGGCVESLRNHKER-SCKWLTIFRHPIARLLSAYHHCLEAP-KDPVCPPT----ESTGLVVFAELWGNFAMRQFALESVSPSAVKEWAAQRQARTGTSMWYLVKEYL---------------ARGGIAEDEVLESMLEPVKGLLSTQYAAVGIAQELETTMVLFSKALSMEGLDWSSSWATLGI-NEEVKQDSEYDIAESEPFRQALENPRIVSALRLDMSLYEHAMHVFKDQVAQFGIE 543          
BLAST of mRNA_F-serratus_M_contig1429.3059.1 vs. uniprot
Match: D8LU75_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LU75_ECTSI)

HSP 1 Score: 137 bits (344), Expect = 4.070e-35
Identity = 91/293 (31.06%), Postives = 149/293 (50.85%), Query Frame = 1
Query:   25 MVKSGGTTIKGLLHRFTERSSTRRSEYANAMWLKGDQGTRLAENIFTSVDGIIYGGYAEALRPIRDSGNCRWFTIFRHPVPRLVSAFFYCKYMNRKDPLCAQDTIDLDTVDLLSFAEHWGNYGLRQYALGFLSNEEILTSPFAREC-TNCPAWYIVKQHLQSLHQQTPNNATGVFSNASPTDEYSLHAILEPALEVISSRYTAVGILEDMTTTMRLFDSALGMNHFNWTVETQNLRAKNEDLKRKSE----EHAILHEAWTNPAIIRFISLDLTLYEYATKIYAKQLEQYGLD 888
            M KSG +  + +    TE+       +    W +GD     A ++  S   +++GG  E+LR  +   +C+W TIFRHP+ RL+SA+ +C     KDP+C       ++  L +FAE WGN+ +RQ+AL  +S   +      R+  T    WY+VK++L               +     ++  L + LEP   ++S++Y AVGI +++ TTM LF  AL M   +W+     L    ED K+ SE    E     +A  NP I+  + LD++LYE+A  ++  Q+ Q+G++
Sbjct:    1 MDKSGASGARRVA---TEQWRKDELVFDTVQWRRGDG---FAADVMASRWKLLHGGCVESLRNHKGR-SCKWITIFRHPIARLLSAYDHCLGAP-KDPVCPPT----ESTGLAAFAELWGNFAMRQFALAAVSPSAVKEWAAQRQARTGTSMWYLVKEYL---------------ARGGIAEDEVLGSKLEPVKGLLSTQYAAVGIAQELKTTMVLFSKALSMEGLDWSSSWATLGINEED-KQDSEYDITESEPFRQALENPRIVSALRLDMSLYEHAVHVFKDQVAQFGIE 265          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1429.3059.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 19
Match NameE-valueIdentityDescription
D7FS84_ECTSI4.970e-6437.83Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
D7G715_ECTSI2.600e-5938.46Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JY77_9PHAE4.050e-5736.84Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JNJ0_9PHAE7.310e-5638.85Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FWQ3_ECTSI1.090e-5537.46Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G716_ECTSI3.480e-5335.41Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A6H5JQY7_9PHAE3.740e-5235.69Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L061_9PHAE1.740e-4236.11Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JQM0_9PHAE4.430e-4032.11Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LU75_ECTSI4.070e-3531.06Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1429contigF-serratus_M_contig1429:225050..226492 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score189.5
Seed ortholog evalue2.2e-45
Seed eggNOG ortholog2880.D7G715
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Sulfotransferase family
EggNOG OGs2CYGC@1,2S47N@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons3
Model size897
Cds size873
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1429.3059.1prot_F-serratus_M_contig1429.3059.1Fucus serratus malepolypeptideF-serratus_M_contig1429 225074..226492 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929411.9778454-UTR-F-serratus_M_contig1429:225049..2250731622929411.9778454-UTR-F-serratus_M_contig1429:225049..225073Fucus serratus maleUTRF-serratus_M_contig1429 225050..225073 +
1690962839.8088524-UTR-F-serratus_M_contig1429:225049..2250731690962839.8088524-UTR-F-serratus_M_contig1429:225049..225073Fucus serratus maleUTRF-serratus_M_contig1429 225050..225073 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929411.9906547-CDS-F-serratus_M_contig1429:225073..2253571622929411.9906547-CDS-F-serratus_M_contig1429:225073..225357Fucus serratus maleCDSF-serratus_M_contig1429 225074..225357 +
1690962839.8198838-CDS-F-serratus_M_contig1429:225073..2253571690962839.8198838-CDS-F-serratus_M_contig1429:225073..225357Fucus serratus maleCDSF-serratus_M_contig1429 225074..225357 +
1622929412.0031831-CDS-F-serratus_M_contig1429:225685..2258531622929412.0031831-CDS-F-serratus_M_contig1429:225685..225853Fucus serratus maleCDSF-serratus_M_contig1429 225686..225853 +
1690962839.827976-CDS-F-serratus_M_contig1429:225685..2258531690962839.827976-CDS-F-serratus_M_contig1429:225685..225853Fucus serratus maleCDSF-serratus_M_contig1429 225686..225853 +
1622929412.0235183-CDS-F-serratus_M_contig1429:226071..2264921622929412.0235183-CDS-F-serratus_M_contig1429:226071..226492Fucus serratus maleCDSF-serratus_M_contig1429 226072..226492 +
1690962839.8362083-CDS-F-serratus_M_contig1429:226071..2264921690962839.8362083-CDS-F-serratus_M_contig1429:226071..226492Fucus serratus maleCDSF-serratus_M_contig1429 226072..226492 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig1429.3059.1

>prot_F-serratus_M_contig1429.3059.1 ID=prot_F-serratus_M_contig1429.3059.1|Name=mRNA_F-serratus_M_contig1429.3059.1|organism=Fucus serratus male|type=polypeptide|length=291bp
MVKSGGTTIKGLLHRFTERSSTRRSEYANAMWLKGDQGTRLAENIFTSVD
GIIYGGYAEALRPIRDSGNCRWFTIFRHPVPRLVSAFFYCKYMNRKDPLC
AQDTIDLDTVDLLSFAEHWGNYGLRQYALGFLSNEEILTSPFARECTNCP
AWYIVKQHLQSLHQQTPNNATGVFSNASPTDEYSLHAILEPALEVISSRY
TAVGILEDMTTTMRLFDSALGMNHFNWTVETQNLRAKNEDLKRKSEEHAI
LHEAWTNPAIIRFISLDLTLYEYATKIYAKQLEQYGLDNI*
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mRNA from alignment at F-serratus_M_contig1429:225050..226492+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig1429.3059.1 ID=mRNA_F-serratus_M_contig1429.3059.1|Name=mRNA_F-serratus_M_contig1429.3059.1|organism=Fucus serratus male|type=mRNA|length=1443bp|location=Sequence derived from alignment at F-serratus_M_contig1429:225050..226492+ (Fucus serratus male)
CAACGATGCTGGGTTTTTCACCATATGGTAAAATCTGGTGGAACAACCAT AAAGGGCTTGCTTCATAGATTCACCGAACGTAGCTCGACCCGTCGGAGTG AGTATGCTAATGCGATGTGGCTTAAGGGAGACCAAGGTACAAGACTCGCA GAAAACATTTTTACAAGCGTTGACGGCATCATCTATGGCGGGTATGCTGA AGCACTGCGGCCGATAAGGGACAGCGGGAACTGCAGGTGGTTCACCATTT TTAGGCACCCAGTTCCCAGACTCGTCTCGGCATTCTTCTACTGCAAGTAC ATGAACAGGTGGGAGGATTTGTGCGTGTTAAATGTTTCAAGGGGACCTCC GTCGAATAATGGGATTGTTTGCTGTTCATACTAAATGTTGATTAATTTGT TACATCGTCTACGACAAGAGAACGCATGTCAAATACGGCCCTCCGCCGCT TCTGTCGTTATGGATCGGATTGAAACACACAAGAAACACTCGTTAACATA CGTTTTGTACAAATTTCTTCATGAGACTACACGGGTTGTAACAAGCACGA CGACGGCCTTCCACGAATGGATTTACCTAGTCGCCGTTTCCGCCGCCGTG GTTCGGATTTACCGTACAATTTGTTTCTTTTCCCAGGAAAGACCCCCTGT GTGCCCAAGACACGATCGACCTCGACACGGTTGATCTCCTATCCTTTGCG GAGCATTGGGGAAACTACGGTCTGCGACAGTACGCCCTCGGGTTTTTGTC GAATGAAGAAATACTTACATCTCCATTTGCGCGGGAATGTACGAACTGCC CGGCGTGAGTACCGATGCGGGCGCAAGGCAGTAGTGGCAGTGGAATTTAT GCGCTTGCCTTTCATGGCAGTTGATGTCGTGATTGTGTATGAGTGACATG TAATTATAGTCGGCAAATAACTATATAAACCAGTCTGCAGCGTTGTTGCT TATAGCCATTTATATATTTATATCTCGAGGTTATACTGAGCTCGGCCTTG CGCTTATTTTCTTAACGAACAGGTGGTACATTGTAAAGCAGCATCTACAG AGTCTACACCAGCAAACTCCAAACAATGCCACGGGCGTTTTCTCGAACGC CAGTCCGACTGACGAATACAGCTTGCACGCGATACTCGAACCTGCCCTTG AAGTCATCAGTTCAAGGTACACTGCGGTGGGTATACTGGAAGATATGACA ACGACGATGCGTCTGTTCGACAGCGCCCTTGGCATGAACCACTTCAACTG GACTGTGGAAACACAGAACCTGAGAGCGAAGAACGAAGACCTCAAGCGGA AAAGTGAAGAACATGCCATTTTGCATGAGGCGTGGACTAACCCTGCCATC ATCAGGTTTATTTCATTGGATCTGACCCTGTACGAGTACGCCACGAAGAT CTACGCGAAGCAACTTGAACAATACGGACTAGATAATATTTAA
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Coding sequence (CDS) from alignment at F-serratus_M_contig1429:225050..226492+

>mRNA_F-serratus_M_contig1429.3059.1 ID=mRNA_F-serratus_M_contig1429.3059.1|Name=mRNA_F-serratus_M_contig1429.3059.1|organism=Fucus serratus male|type=CDS|length=1746bp|location=Sequence derived from alignment at F-serratus_M_contig1429:225050..226492+ (Fucus serratus male)
ATGGTAAAATCTGGTGGAACAACCATAAAGGGCTTGCTTCATAGATTCAC
CGAACGTAGCTCGACCCGTCGGAGTGAGTATGCTAATGCGATGTGGCTTA
AGGGAGACCAAGGTACAAGACTCGCAGAAAACATTTTTACAAGCGTTGAC
GGCATCATCTATGGCGGGTATGCTGAAGCACTGCGGCCGATAAGGGACAG
CGGGAACTGCAGGTGGTTCACCATTTTTAGGCACCCAGTTCCCAGACTCG
TCTCGGCATTCTTCTACTGCAAGTACATGAACAGATGGTAAAATCTGGTG
GAACAACCATAAAGGGCTTGCTTCATAGATTCACCGAACGTAGCTCGACC
CGTCGGAGTGAGTATGCTAATGCGATGTGGCTTAAGGGAGACCAAGGTAC
AAGACTCGCAGAAAACATTTTTACAAGCGTTGACGGCATCATCTATGGCG
GGTATGCTGAAGCACTGCGGCCGATAAGGGACAGCGGGAACTGCAGGTGG
TTCACCATTTTTAGGCACCCAGTTCCCAGACTCGTCTCGGCATTCTTCTA
CTGCAAGTACATGAACAGGAAAGACCCCCTGTGTGCCCAAGACACGATCG
ACCTCGACACGGTTGATCTCCTATCCTTTGCGGAGCATTGGGGAAACTAC
GGTCTGCGACAGTACGCCCTCGGGTTTTTGTCGAATGAAGAAATACTTAC
ATCTCCATTTGCGCGGGAATGTACGAACTGCCCGGCGAAAGACCCCCTGT
GTGCCCAAGACACGATCGACCTCGACACGGTTGATCTCCTATCCTTTGCG
GAGCATTGGGGAAACTACGGTCTGCGACAGTACGCCCTCGGGTTTTTGTC
GAATGAAGAAATACTTACATCTCCATTTGCGCGGGAATGTACGAACTGCC
CGGCGTGGTACATTGTAAAGCAGCATCTACAGAGTCTACACCAGCAAACT
CCAAACAATGCCACGGGCGTTTTCTCGAACGCCAGTCCGACTGACGAATA
CAGCTTGCACGCGATACTCGAACCTGCCCTTGAAGTCATCAGTTCAAGGT
ACACTGCGGTGGGTATACTGGAAGATATGACAACGACGATGCGTCTGTTC
GACAGCGCCCTTGGCATGAACCACTTCAACTGGACTGTGGAAACACAGAA
CCTGAGAGCGAAGAACGAAGACCTCAAGCGGAAAAGTGAAGAACATGCCA
TTTTGCATGAGGCGTGGACTAACCCTGCCATCATCAGGTTTATTTCATTG
GATCTGACCCTGTACGAGTACGCCACGAAGATCTACGCGAAGCAACTTGA
ACAATACGGACTAGATAATATTTAAGTGGTACATTGTAAAGCAGCATCTA
CAGAGTCTACACCAGCAAACTCCAAACAATGCCACGGGCGTTTTCTCGAA
CGCCAGTCCGACTGACGAATACAGCTTGCACGCGATACTCGAACCTGCCC
TTGAAGTCATCAGTTCAAGGTACACTGCGGTGGGTATACTGGAAGATATG
ACAACGACGATGCGTCTGTTCGACAGCGCCCTTGGCATGAACCACTTCAA
CTGGACTGTGGAAACACAGAACCTGAGAGCGAAGAACGAAGACCTCAAGC
GGAAAAGTGAAGAACATGCCATTTTGCATGAGGCGTGGACTAACCCTGCC
ATCATCAGGTTTATTTCATTGGATCTGACCCTGTACGAGTACGCCACGAA
GATCTACGCGAAGCAACTTGAACAATACGGACTAGATAATATTTAA
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