prot_F-serratus_M_contig1427.3052.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig1427.3052.1
Unique Nameprot_F-serratus_M_contig1427.3052.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length72
Homology
[Close]
BLAST of mRNA_F-serratus_M_contig1427.3052.1 vs. uniprot
Match: A0A6H5JT61_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JT61_9PHAE)

HSP 1 Score: 82.8 bits (203), Expect = 7.660e-17
Identity = 42/74 (56.76%), Postives = 54/74 (72.97%), Query Frame = 0 
Query:    1 CSVTKSKQQAHPKKSTRKTTRPMQLVYTDLMGPFTPAAKGG--YRLKFTDDYLRMKDIFLLKNKTEAAESLHQY 72
            C+++KS Q AHPKK++R+TT PM LVYTD+MG  TP AKGG  Y   F D Y R+K+I+LLK K+E   +LH Y
Sbjct:  144 CAISKSTQLAHPKKTSRETTAPMLLVYTDIMGKTTPLAKGGFGYVSMFNDAYSRIKEIYLLKAKSETVRALHAY 217
[Close]
BLAST of mRNA_F-serratus_M_contig1427.3052.1 vs. uniprot
Match: A0A6H5JYD3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYD3_9PHAE)

HSP 1 Score: 82.4 bits (202), Expect = 1.050e-16
Identity = 43/74 (58.11%), Postives = 54/74 (72.97%), Query Frame = 0 
Query:    1 CSVTKSKQQAHPKKSTRKTTRPMQLVYTDLMGPFTPAAKGG--YRLKFTDDYLRMKDIFLLKNKTEAAESLHQY 72
            C+++KS+Q AHP+K+ R+TT PMQLVYTD MG  TP AKGG  Y  KFTD Y  MK+I+LLK  +E   +LH Y
Sbjct:  346 CAISKSRQLAHPEKTNRETTAPMQLVYTDNMGKTTPLAKGGFGYVSKFTDAYSWMKEIYLLKAISETVRALHAY 419
[Close]
BLAST of mRNA_F-serratus_M_contig1427.3052.1 vs. uniprot
Match: A0A6H5KZ34_9PHAE (Integrase catalytic domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZ34_9PHAE)

HSP 1 Score: 75.1 bits (183), Expect = 8.530e-15
Identity = 38/77 (49.35%), Postives = 51/77 (66.23%), Query Frame = 0 
Query:    1 CSVTKSKQQAHPKKSTRKTTRPMQLVYTDLMGPFTPAAK--GG---YRLKFTDDYLRMKDIFLLKNKTEAAESLHQY 72
            C + K KQ  HPK+STR+ +RP QLV  D MGP  P AK  GG   Y  K TDDY +MK+++LL+ K++  E++H Y
Sbjct:   80 CQIAKHKQSPHPKQSTRELSRPGQLVVIDNMGPVNPPAKYKGGSFPYACKITDDYTKMKEVYLLRKKSDTTEAVHTY 156
[Close]
BLAST of mRNA_F-serratus_M_contig1427.3052.1 vs. uniprot
Match: A0A6H5KHY1_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHY1_9PHAE)

HSP 1 Score: 75.5 bits (184), Expect = 1.020e-14
Identity = 38/77 (49.35%), Postives = 51/77 (66.23%), Query Frame = 0 
Query:    1 CSVTKSKQQAHPKKSTRKTTRPMQLVYTDLMGPFTPAAK--GG---YRLKFTDDYLRMKDIFLLKNKTEAAESLHQY 72
            C + K KQ  HPK+STR+ +RP QLV  D MGP  P AK  GG   Y  K TDDY +MK+++LL+ K++  E++H Y
Sbjct:   28 CQIAKHKQSPHPKQSTRELSRPGQLVVIDNMGPVNPPAKNKGGFFPYECKITDDYTKMKEVYLLRKKSDTTEAVHTY 104
[Close]
BLAST of mRNA_F-serratus_M_contig1427.3052.1 vs. uniprot
Match: A0A6H5KCM0_9PHAE (Integrase catalytic domain-containing protein n=5 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCM0_9PHAE)

HSP 1 Score: 75.1 bits (183), Expect = 3.860e-14
Identity = 38/77 (49.35%), Postives = 51/77 (66.23%), Query Frame = 0 
Query:    1 CSVTKSKQQAHPKKSTRKTTRPMQLVYTDLMGPFTPAAK--GG---YRLKFTDDYLRMKDIFLLKNKTEAAESLHQY 72
            C + K KQ  HPK+STR+ +RP QLV  D MGP  P AK  GG   Y  K TDDY +MK+++LL+ K++  E++H Y
Sbjct:   80 CQIAKHKQSPHPKQSTRELSRPGQLVVIDNMGPVNPPAKYKGGSFPYACKITDDYTKMKEVYLLRKKSDTTEAVHTY 156
[Close]
BLAST of mRNA_F-serratus_M_contig1427.3052.1 vs. uniprot
Match: A0A6H5KT84_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KT84_9PHAE)

HSP 1 Score: 75.1 bits (183), Expect = 3.900e-14
Identity = 38/77 (49.35%), Postives = 51/77 (66.23%), Query Frame = 0 
Query:    1 CSVTKSKQQAHPKKSTRKTTRPMQLVYTDLMGPFTPAAK--GG---YRLKFTDDYLRMKDIFLLKNKTEAAESLHQY 72
            C + K KQ  HPK+STR+ +RP QLV  D MGP  P AK  GG   Y  K TDDY +MK+++LL+ K++  E++H Y
Sbjct:  456 CQIAKHKQSPHPKQSTREISRPGQLVVIDNMGPVNPPAKYKGGSFPYACKITDDYTKMKEVYLLRKKSDTTEAVHTY 532
[Close]
BLAST of mRNA_F-serratus_M_contig1427.3052.1 vs. uniprot
Match: A0A6H5K500_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K500_9PHAE)

HSP 1 Score: 75.1 bits (183), Expect = 3.910e-14
Identity = 38/77 (49.35%), Postives = 51/77 (66.23%), Query Frame = 0 
Query:    1 CSVTKSKQQAHPKKSTRKTTRPMQLVYTDLMGPFTPAAK--GG---YRLKFTDDYLRMKDIFLLKNKTEAAESLHQY 72
            C + K KQ  HPK+STR+ +RP QLV  D MGP  P AK  GG   Y  K TDDY +MK+++LL+ K++  E++H Y
Sbjct:   80 CQIAKHKQSPHPKQSTRELSRPGQLVVIDNMGPVNPPAKYKGGSFPYACKITDDYTKMKEVYLLRKKSDTTEAVHTY 156
[Close]
BLAST of mRNA_F-serratus_M_contig1427.3052.1 vs. uniprot
Match: A0A6H5K1R7_9PHAE (Integrase catalytic domain-containing protein (Fragment) n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1R7_9PHAE)

HSP 1 Score: 75.1 bits (183), Expect = 3.920e-14
Identity = 38/77 (49.35%), Postives = 51/77 (66.23%), Query Frame = 0 
Query:    1 CSVTKSKQQAHPKKSTRKTTRPMQLVYTDLMGPFTPAAK--GG---YRLKFTDDYLRMKDIFLLKNKTEAAESLHQY 72
            C + K KQ  HPK+STR+ +RP QLV  D MGP  P AK  GG   Y  K TDDY +MK+++LL+ K++  E++H Y
Sbjct:   80 CQIAKHKQSPHPKQSTRELSRPGQLVVIDNMGPVNPPAKYKGGSFPYACKITDDYTKMKEVYLLRKKSDTTEAVHTY 156
[Close]
BLAST of mRNA_F-serratus_M_contig1427.3052.1 vs. uniprot
Match: A0A6H5JJR8_9PHAE (Integrase catalytic domain-containing protein n=11 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJR8_9PHAE)

HSP 1 Score: 75.1 bits (183), Expect = 3.940e-14
Identity = 38/77 (49.35%), Postives = 51/77 (66.23%), Query Frame = 0 
Query:    1 CSVTKSKQQAHPKKSTRKTTRPMQLVYTDLMGPFTPAAK--GG---YRLKFTDDYLRMKDIFLLKNKTEAAESLHQY 72
            C + K KQ  HPK+STR+ +RP QLV  D MGP  P AK  GG   Y  K TDDY +MK+++LL+ K++  E++H Y
Sbjct:   80 CQIAKHKQSPHPKQSTRELSRPGQLVVIDNMGPVNPPAKYKGGSFPYACKITDDYTKMKEVYLLRKKSDTTEAVHTY 156
[Close]
BLAST of mRNA_F-serratus_M_contig1427.3052.1 vs. uniprot
Match: A0A6H5J8P7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J8P7_9PHAE)

HSP 1 Score: 75.1 bits (183), Expect = 3.940e-14
Identity = 38/77 (49.35%), Postives = 51/77 (66.23%), Query Frame = 0 
Query:    1 CSVTKSKQQAHPKKSTRKTTRPMQLVYTDLMGPFTPAAK--GG---YRLKFTDDYLRMKDIFLLKNKTEAAESLHQY 72
            C + K KQ  HPK+STR+ +RP QLV  D MGP  P AK  GG   Y  K TDDY +MK+++LL+ K++  E++H Y
Sbjct:  421 CQIAKHKQSPHPKQSTRELSRPGQLVVIDNMGPVNPPAKYKGGSFPYACKITDDYTKMKEVYLLRKKSDTTEAVHTY 497
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1427.3052.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JT61_9PHAE7.660e-1756.76Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5JYD3_9PHAE1.050e-1658.11Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KZ34_9PHAE8.530e-1549.35Integrase catalytic domain-containing protein n=2 ... [more]
A0A6H5KHY1_9PHAE1.020e-1449.35Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5KCM0_9PHAE3.860e-1449.35Integrase catalytic domain-containing protein n=5 ... [more]
A0A6H5KT84_9PHAE3.900e-1449.35Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K500_9PHAE3.910e-1449.35Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5K1R7_9PHAE3.920e-1449.35Integrase catalytic domain-containing protein (Fra... [more]
A0A6H5JJR8_9PHAE3.940e-1449.35Integrase catalytic domain-containing protein n=11... [more]
A0A6H5J8P7_9PHAE3.940e-1449.35Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036397Ribonuclease H superfamilyGENE3D3.30.420.10coord: 12..71
e-value: 2.9E-5
score: 25.4

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1427contigF-serratus_M_contig1427:963..1178 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1427.3052.1mRNA_F-serratus_M_contig1427.3052.1Fucus serratus malemRNAF-serratus_M_contig1427 963..1178 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig1427.3052.1 ID=prot_F-serratus_M_contig1427.3052.1|Name=mRNA_F-serratus_M_contig1427.3052.1|organism=Fucus serratus male|type=polypeptide|length=72bp
CSVTKSKQQAHPKKSTRKTTRPMQLVYTDLMGPFTPAAKGGYRLKFTDDY
LRMKDIFLLKNKTEAAESLHQY
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036397RNaseH_sf