mRNA_F-serratus_M_contig1422.3036.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig1422.3036.1
Unique NamemRNA_F-serratus_M_contig1422.3036.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
BLAST of mRNA_F-serratus_M_contig1422.3036.1 vs. uniprot
Match: A0A6H5KUY5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUY5_9PHAE)

HSP 1 Score: 290 bits (741), Expect = 2.360e-91
Identity = 147/276 (53.26%), Postives = 198/276 (71.74%), Query Frame = 1
Query:   19 FRDMVRTLKGRASIPQRRVLITRMEEILVDLQGSVATMLMGQYVSMTTDGWTSRANESYISFTVVYVNDDWKMVTLALSCSKKQGATKGDDLAKSIKTMIKNHGLTGHVVVCNTDCEPSMVKAGRIL-TDDAVLMHVGCTCHRIECVTALVFDGPGVKKSMALARAVVTRYTKSSQAAGRLQELCGIVGIIPLKVIQDVETRWWSTQSMIERLVYLRRAVELHESLDNVAPLLGPVDWNVLELLEPVLAPFMYVQKKLE-SNNVTGSLVVPLICDL 840
            F  +V  L  +A  P RR L+ +M EI  +L+  VA ML  +YV++TTDGWTSR+NESY+S TV Y++  W++  L+L+C+K  G+T G+DLA+ I +MI+ HGLTG V  C TDCEPSMVKAGR+L    + L H+GC+ HR+E  T+ VF+G  +  ++A ARAVV RY +SSQ +GRL    GI+ + PL V+QDVETRWWS+ +MIERL+YL +A++LHES DN+AP+L   DW VL L+EP+L PFM  QK LE +  VTGS+ VP I +L
Sbjct:   34 FHAVVSGLNKKARAPIRRALVEKMREIKKNLESEVALMLDDEYVAITTDGWTSRSNESYMSLTVAYIDVGWQLHHLSLNCTKHTGSTHGEDLAREITSMIERHGLTGRVTACVTDCEPSMVKAGRLLEVGGSNLEHIGCSNHRMESTTSSVFNGKSLG-ALAKARAVVGRYKRSSQMSGRLAVFIGILKLSPLSVLQDVETRWWSSWAMIERLLYLMKAIKLHESTDNIAPVLSETDWEVLRLIEPILRPFMQAQKDLEGAKYVTGSMTVPKIGEL 308          
BLAST of mRNA_F-serratus_M_contig1422.3036.1 vs. uniprot
Match: D8LCS5_ECTSI (Dimer_Tnp_hAT domain-containing protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCS5_ECTSI)

HSP 1 Score: 285 bits (729), Expect = 2.420e-89
Identity = 140/273 (51.28%), Postives = 192/273 (70.33%), Query Frame = 1
Query:   28 MVRTLKGRASIPQRRVLITRMEEILVDLQGSVATMLMGQYVSMTTDGWTSRANESYISFTVVYVNDDWKMVTLALSCSKKQGATKGDDLAKSIKTMIKNHGLTGHVVVCNTDCEPSMVKAGRIL-TDDAVLMHVGCTCHRIECVTALVFDGPGVKKSMALARAVVTRYTKSSQAAGRLQELCGIVGIIPLKVIQDVETRWWSTQSMIERLVYLRRAVELHESLDNVAPLLGPVDWNVLELLEPVLAPFMYVQKKLE-SNNVTGSLVVPLICDL 840
            MV  L  RA +P RR L++RM  +   L+  VA ML  ++V++TTDGWTSR NESY+S TV Y++ +WK+  L+L C+K  G T G+DLA  +  M++ H LTG V+ C TDCEPSM+KAGR+L  D + + H+GC+ HR+E  T+ VF+G  +  ++ LAR +V RY KSSQ A RL +LCGI+ + PL V+QDVETRWWST +M+ RL+YL +A++LHES+D V PLL   DW VL L+EP+L PFM  QK LE +  VTGS+ +  + +L
Sbjct:    1 MVSALNKRAKVPSRRELLSRMRAVKTALESEVALMLDAEFVAITTDGWTSRNNESYMSLTVAYIDYEWKLHHLSLDCAKHTGTTTGEDLAALVAGMVERHDLTGRVIACVTDCEPSMIKAGRLLEVDGSTISHIGCSNHRMESTTSSVFNGRSLG-ALGLARTLVGRYKKSSQMAARLVQLCGILQMEPLSVMQDVETRWWSTWAMVVRLLYLMKAIKLHESMDEVHPLLSDTDWEVLRLIEPILRPFMKAQKDLEGAQYVTGSMTIGKMAEL 272          
BLAST of mRNA_F-serratus_M_contig1422.3036.1 vs. uniprot
Match: A0A6H5JJV8_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJV8_9PHAE)

HSP 1 Score: 275 bits (702), Expect = 3.480e-86
Identity = 133/281 (47.33%), Postives = 194/281 (69.04%), Query Frame = 1
Query:    1 VVDNKFFRDMVRTLKGRASIPQRRVLITRMEEILVDLQGSVATMLMGQYVSMTTDGWTSRANESYISFTVVYVNDDWKMVTLALSCSKKQGATKGDDLAKSIKTMIKNHGLTGHVVVCNTDCEPSMVKAGRILTDDAVLMHVGCTCHRIECVTALVFDGPGVKKSMALARAVVTRYTKSSQAAGRLQELCGIVGIIPLKVIQDVETRWWSTQSMIERLVYLRRAVELHESLDNVAPLLGPVDWNVLELLEPVLAPFMYVQKKLE-SNNVTGSLVVPLICDL 840
            +V+N+ F +MVR LK RA++P +R+ + ++  +   L   V   L G++V++T+DGWTS +N++Y+ FT  Y++ ++ +V L + C K  G T G+DL +++K MI  +GLT   V   TDCEPSMVKAGR+L ++  + H+GC CHR+E +T+  F GPGV K++ALAR VVTRY  SSQA+ RL+++  IV +   KV+QDVETRWWST + I RL+ LRR +  HE +D++ PLL   DW VL+++EP+  PF+  QK  E S +VT SLV+P I DL
Sbjct:    1 MVENEHFIEMVRFLKSRATVPHKRLFLEKLRGMKKGLDQEVLGRLTGEHVAVTSDGWTSASNDTYMYFTCTYISSNFDLVALCVECKKHGGRTTGEDLVEAVKAMIARNGLTSRTVATTTDCEPSMVKAGRLLEENEGVTHLGCFCHRLESITSQAFGGPGVSKALALARRVVTRYNMSSQASDRLEQMRDIVQVERKKVVQDVETRWWSTYASICRLLSLRRPITEHERIDSIPPLLKEKDWEVLQVVEPLSKPFILSQKHREASKDVTVSLVIPYIADL 281          
BLAST of mRNA_F-serratus_M_contig1422.3036.1 vs. uniprot
Match: A0A6H5JHP9_9PHAE (Autophagy protein 5 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHP9_9PHAE)

HSP 1 Score: 248 bits (633), Expect = 2.700e-72
Identity = 121/237 (51.05%), Postives = 164/237 (69.20%), Query Frame = 1
Query:  133 LMGQYVSMTTDGWTSRANESYISFTVVYVNDDWKMVTLALSCSKKQGATKGDDLAKSIKTMIKNHGLTGHVVVCNTDCEPSMVKAGRILTDDAVLMHVGCTCHRIECVTALVFDGPGVKKSMALARAVVTRYTKSSQAAGRLQELCGIVGIIPLKVIQDVETRWWSTQSMIERLVYLRRAVELHESLDNVAPLLGPVDWNVLELLEPVLAPFMYVQKKLE-SNNVTGSLVVPLICDL 840
            + G++V++T+DGWT  +N++Y+SFT  Y++ ++ +V L L C K    T G+DL +++K MI  +GLTG  V   TDCE SMVKAGR+L ++  + H+GC CHR+E +T+  F GPGV K++ALAR VVTRYT SSQA+ RL+++C IV +    V+QDVETRWWST   I RL+ LRR +  HE +D+  PLL   DW VL+L+E +L PFM  QK LE S  VT  LV P I DL
Sbjct:    1 MTGEHVALTSDGWTPASNDTYMSFTCTYISSNFDLVALCLECKKHGWRTAGEDLVEAVKAMIARNGLTGRTVAITTDCELSMVKAGRLLEENEGVTHLGCFCHRLESITSQAFGGPGVSKALALARGVVTRYTISSQASDRLEQVCDIVQVERKNVVQDVETRWWSTYVSICRLISLRRPITEHEIIDSTPPLLKEKDWEVLQLVESLLKPFMTAQKHLEASKEVTVRLVSPYIADL 237          
BLAST of mRNA_F-serratus_M_contig1422.3036.1 vs. uniprot
Match: A0A6H5KVI1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVI1_9PHAE)

HSP 1 Score: 212 bits (540), Expect = 4.270e-63
Identity = 107/223 (47.98%), Postives = 143/223 (64.13%), Query Frame = 1
Query:  175 SRANESYISFTVVYVNDDWKMVTLALSCSKKQGATKGDDLAKSIKTMIKNHGLTGHVVVCNTDCEPSMVKAGRILTDDAVLMHVGCTCHRIECVTALVFDGPGVKKSMALARAVVTRYTKSSQAAGRLQELCGIVGIIPLKVIQDVETRWWSTQSMIERLVYLRRAVELHESLDNVAPLLGPVDWNVLELLEPVLAPFMYVQKKLE-SNNVTGSLVVPLICDL 840
            S +N++Y++FT  Y++ ++ +V L L   K  G T G+DL +++K MI  +GLTG  V   TDCEP MVKAGR+L ++  + H+GC CHR E +T+  F GPGV K++AL R VVTRYT SSQA+ RL+++C IV +   KV+QDVETRWWST                   +D++ PLL   DW VL+L+EP+L PFM  QK LE S  VT SLV   I DL
Sbjct:    3 SASNDTYMTFTCTYISSNFDLVALCLEYKKHGGRTTGEDLVEAVKAMIARNGLTGRTVATTTDCEPFMVKAGRLLEENEGVSHLGCFCHRFESITSQAFGGPGVSKALALPRGVVTRYTMSSQASNRLEQMCDIVQVERKKVVQDVETRWWSTP----------------REIDSIPPLLNEKDWEVLQLVEPLLHPFMTAQKHLEASKGVTVSLVTAYIADL 209          
BLAST of mRNA_F-serratus_M_contig1422.3036.1 vs. uniprot
Match: A0A6H5L7Y8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7Y8_9PHAE)

HSP 1 Score: 181 bits (458), Expect = 3.250e-48
Identity = 100/239 (41.84%), Postives = 148/239 (61.92%), Query Frame = 1
Query:   28 MVRTLKGRASIPQRRVLITRMEEILVDLQGSVATMLMGQYVSMTTDGWTSRANESYISFTVVYVNDDWKMVTLALSCSKKQGATKGDDLAKSIKTMIKNHGLTGHVVVCNTDCEPSMVKAGRILTDDA-VLMHVGCTCHRIECVTALVFDGPGVKKSMALARAVVTRYTKSSQAAGRLQELCGI-VGIIPLKVIQDVETRWWSTQSMIERLVY-LRRAVELHESLDNVAPLLGPVDWNV 735
            MV  ++  A +P+++  +T M  +   +   V+ ++ G+ V +T+DGWTS AN++Y+S T   +   WK+VTL++ CSK +G T GD LA  IK  +  HGLTG V    TDCEPSMVK GR+L  DA V   +GC  +R+E  +++VF+GP VKK M LAR +VTRY  SSQAA RL++     +G+   +VIQDV T      S++   +Y LR ++E  +++D++  L    D NV
Sbjct:    1 MVHAIRPSARVPEKKDCVTTMRTVKKCMMEKVSRLIEGEQVCITSDGWTSCANDTYMSLTFTLITSAWKLVTLSVDCSKSEGTTTGDALAAGIKATVAKHGLTGKVTAVTTDCEPSMVKMGRLLAGDATVSTQIGCCNYRLESTSSIVFNGPRVKKVMVLARGLVTRYPTSSQAADRLKQFVKTYLGVDNKRVIQDVVTG-----SLVVPFIYDLRNSLE--DAIDDLVELPPDSDANV 232          
BLAST of mRNA_F-serratus_M_contig1422.3036.1 vs. uniprot
Match: A0A224XKI7_9HEMI (Putative hat-25 zm (Fragment) n=1 Tax=Panstrongylus lignarius TaxID=156445 RepID=A0A224XKI7_9HEMI)

HSP 1 Score: 120 bits (300), Expect = 5.350e-27
Identity = 78/283 (27.56%), Postives = 141/283 (49.82%), Query Frame = 1
Query:    1 VVDNKFFRDMVRTLKGRASIPQRRVLITRM-----EEILVDLQGSVATMLMGQYVSMTTDGWTSRANESYISFTVVYVNDDWKMVTLALSCSKKQGATKGDDLAKSIKTMIKNHGLTGHVVVCNTDCEPSMVKAGRILTDDAVLMHVGCTCHRIECVTALVFDGPGVKKSMALARAVVTRYTKSSQAAGRLQELCGIVGIIPLKVIQDVETRWWSTQSMIERLVYLRRAVELHESL-DNVAPLLGPVDWNVLELLEPVLAPFMYVQKKLESNNV-TGSLVVPL 828
            VV++  FR+ +  L     +P R  +   +     EE L D +  + T   G+   +TTD WTS   E+YI  T  ++++++K+ +L L CSK   + K +D+A ++K + +  G+   +++  +D   +M KA + L +     H GC  H I  +         ++  +   + +V  + +S  A  +L          PLK+IQ+V+TRW ST  M+ER V L  A++   ++ D   P L   +W +L+ +  +L P+  V K +  +   T ++V+PL
Sbjct:  132 VVEDTGFRNFISALNPSYELPNRHTISKTLLPALYEECLNDTKKKILT---GKSFCITTDSWTSNNTENYIGVTAHFLDENFKLHSLLLECSKTDASHKAEDIAGTLKRITQYWGIDQKIILAVSDNASNMQKAIQQLLE---WKHFGCFAHTINLIVKDALKCKDIQAIVEKVKRIVEYFRRSCTATEKLSRYQATSRNTPLKLIQEVQTRWNSTYYMLERFVSLEEAIKSTMAIIDKDLPKLNFEEWKILKEMCQILKPYENVTKAISGDKYCTAAIVIPL 408          
BLAST of mRNA_F-serratus_M_contig1422.3036.1 vs. uniprot
Match: UPI000B936FE6 (zinc finger BED domain-containing protein 1-like n=1 Tax=Myzus persicae TaxID=13164 RepID=UPI000B936FE6)

HSP 1 Score: 117 bits (294), Expect = 2.760e-26
Identity = 87/282 (30.85%), Postives = 143/282 (50.71%), Query Frame = 1
Query:    1 VVDNKFFRDMVRTLKGRASIPQRRVLITRMEEILV-DLQGSVATMLM--GQYVSMTTDGWTSRANESYISFTVVYVNDDWKMVTLALSCSKKQGATKGDDLAKSIKTMIKNHGLTGHVVVCNTDCEPSMVKAGRILTDDAVLMHVGCTCHRIE-CVTALVFDGPGVKKSMALARAVVTRYTKSSQAAGRLQELCGIVGIIP-LKVIQDVETRWWSTQSMIERLVYLRRAVELHESLDNVAPLLGPVDWNVLELLEPVLAPFMYVQKKLESN-NVTGSLVVPL 828
            +V++K F  +++ L     +P R+ L T +  +L  +    V + ++  G +VS+TTDGWTS  NESYI+ T  ++N+D K+ +  LSC     +   D+L      +I+  GL   V  C +D   ++ KA     D     HV C  H +   V   + +   VK+ ++    +V  + KSS AAG+L+ +   +G  P L +IQDV TRW ST  M +R++ L+  +    +  N    L   DWN++     +L PF  +  ++ S  +VT S +V L
Sbjct:  141 IVEDKEFGKLLKMLNPGYDLPSRKTLSTSLLSVLYNETYDKVKSDIVENGNFVSITTDGWTSVKNESYIAVTTHFINNDCKLKSYLLSCFMYSESHTSDNLKNEHLRVIREWGLEHKVSACTSDNASNITKA----IDLCKWRHVRCFAHSLNLAVQNAIKEIQEVKEKVS---GIVRHFKKSSTAAGKLKSIQEQLGYSPPLVLIQDVVTRWNSTFEMFQRVLDLKIPLSTALAETNYNEFLSNNDWNIITRACELLKPFKEITTEISSEKSVTVSKIVVL 415          
BLAST of mRNA_F-serratus_M_contig1422.3036.1 vs. uniprot
Match: X1WY43_ACYPI (DUF659 domain-containing protein n=2 Tax=Acyrthosiphon pisum TaxID=7029 RepID=X1WY43_ACYPI)

HSP 1 Score: 112 bits (280), Expect = 1.510e-25
Identity = 66/226 (29.20%), Postives = 121/226 (53.54%), Query Frame = 1
Query:    4 VDNKFFRDMVRTLKGRASIPQRRVLITRMEEILVDLQGSVATMLMG-QYVSMTTDGWTSRANESYISFTVVYVNDDWKMVTLALSCSKKQGATKGDDLAKSIKTMIKNHGLTGHVVVCNTDCEPSMVKAGRILTDDAVLMHVGCTCHRIECVTALVFDGPGVKKSMALARAVVTRYTKSSQAAGRLQELCGIVGIIPLKVIQDVETRWWST-QSMIERLVYLRRAV 675
            V+NK FR ++ T++   +IP R+ + TR+E++ +D   S+  ++    Y+S+TTDGWTS A +SY++FTV Y +D+WK+ ++ LS  + Q +   ++L  SI  +I++  L   +   + D   ++  A ++  D  +  +  C  H ++       D    +  +  A  +V  + +SS+    L+          L ++Q   TRW ST  +M++RL+ LR AV
Sbjct:   41 VENKGFRSLISTIEPLYTIPSRKSITTRIEKMYIDKSQSIRNIIENINYISLTTDGWTSTAIDSYLTFTVHYFDDNWKLYSVTLSIEEIQESHTAENLKDSIMNVIESWNLNNKITGISHDNAANISNAVKLFYDQDIYSN-RCAAHTLQLAVKKCLDLNTCRPLLKTASKIVASFRQSSKRTYALENYLVEKSCKKLNLVQSCPTRWNSTLDNMLKRLLELRSAV 265          
BLAST of mRNA_F-serratus_M_contig1422.3036.1 vs. uniprot
Match: A0A3Q2CC25_CYPVA (Uncharacterized protein n=1 Tax=Cyprinodon variegatus TaxID=28743 RepID=A0A3Q2CC25_CYPVA)

HSP 1 Score: 114 bits (284), Expect = 6.030e-25
Identity = 88/282 (31.21%), Postives = 137/282 (48.58%), Query Frame = 1
Query:    1 VVDNKFFRDMVRTLKGRASIPQRRVLITRMEEILVDLQGSVATMLMGQY--VSMTTDGWTSRANESYISFTVVYVNDDWKMVTLALSCSKKQGATKGDDLAKSIKTMIKNHGLTGHVVVCNTDCEPSMVKAGRILTDDAVLMHVGCTCHRIECVTALVFDG-PGVKKSMALARAVVTRYTKSSQAAGRLQELCGIVGIIPLKVIQDVETRWWSTQSMIERLVYLRRAVELHESLDNVAPL-LGPVDWNVLELLEPVLAPFMYVQKKLESN-NVTGSLVVPLI 831
            +V++K F+D V+TL  R +IP R+ LI R    L +   S     +G+   V +TTD WTSRA E Y++ T   +N+ W+M    L  S   G    +++   +  +++  G+   +V   TD   +MV A R     A   H  C  H +  V    F   PG+ +    + A+V+ +  S+ AA +L+E+         K++Q VETRW S   M ERL   + AV     L     L L   +W+ + L    L PF  V K++ +  +V+ S VVPL+
Sbjct:   65 IVEDKGFQDFVKTLDSRYNIPSRKSLIERKLPALYEDCSSRVRKALGEVDNVVLTTDMWTSRATEGYLTVTSHIINEHWQMEAYVLETSSFPGQHTAENICSQLTRIVEEWGIKDKIVAVVTDNGANMVAAVR----KAGWAHYPCFAHTLNLVVKDSFKAVPGLLEIQKKSSAIVSFFHHSTTAASKLKEIQKQQKFPEKKLLQSVETRWNSLFYMWERLSEQKDAVTTVLCLLGKTSLCLSQEEWSEISLSLNALRPFEEVTKEISAEKHVSISKVVPLV 342          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1422.3036.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KUY5_9PHAE2.360e-9153.26Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LCS5_ECTSI2.420e-8951.28Dimer_Tnp_hAT domain-containing protein n=2 Tax=Ec... [more]
A0A6H5JJV8_9PHAE3.480e-8647.33Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec... [more]
A0A6H5JHP9_9PHAE2.700e-7251.05Autophagy protein 5 n=1 Tax=Ectocarpus sp. CCAP 13... [more]
A0A6H5KVI1_9PHAE4.270e-6347.98Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L7Y8_9PHAE3.250e-4841.84Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A224XKI7_9HEMI5.350e-2727.56Putative hat-25 zm (Fragment) n=1 Tax=Panstrongylu... [more]
UPI000B936FE62.760e-2630.85zinc finger BED domain-containing protein 1-like n... [more]
X1WY43_ACYPI1.510e-2529.20DUF659 domain-containing protein n=2 Tax=Acyrthosi... [more]
A0A3Q2CC25_CYPVA6.030e-2531.21Uncharacterized protein n=1 Tax=Cyprinodon variega... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1422contigF-serratus_M_contig1422:4378..5217 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score284.3
Seed ortholog evalue6.1e-74
Seed eggNOG ortholog2880.D8LCS5
Hectar predicted targeting categorymitochondrion
EggNOG free text desc.protein dimerization activity
EggNOG OGsKOG1121@1,KOG1121@2759
COG Functional cat.E
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons1
Model size840
Cds size813
Stop0
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929408.3476267-CDS-F-serratus_M_contig1422:4377..51901622929408.3476267-CDS-F-serratus_M_contig1422:4377..5190Fucus serratus maleCDSF-serratus_M_contig1422 4378..5190 -
1690962838.1312807-CDS-F-serratus_M_contig1422:4377..51901690962838.1312807-CDS-F-serratus_M_contig1422:4377..5190Fucus serratus maleCDSF-serratus_M_contig1422 4378..5190 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929408.3590884-UTR-F-serratus_M_contig1422:5190..52171622929408.3590884-UTR-F-serratus_M_contig1422:5190..5217Fucus serratus maleUTRF-serratus_M_contig1422 5191..5217 -
1690962838.1415014-UTR-F-serratus_M_contig1422:5190..52171690962838.1415014-UTR-F-serratus_M_contig1422:5190..5217Fucus serratus maleUTRF-serratus_M_contig1422 5191..5217 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1422.3036.1prot_F-serratus_M_contig1422.3036.1Fucus serratus malepolypeptideF-serratus_M_contig1422 4378..5190 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig1422.3036.1

>prot_F-serratus_M_contig1422.3036.1 ID=prot_F-serratus_M_contig1422.3036.1|Name=mRNA_F-serratus_M_contig1422.3036.1|organism=Fucus serratus male|type=polypeptide|length=271bp
MVRTLKGRASIPQRRVLITRMEEILVDLQGSVATMLMGQYVSMTTDGWTS
RANESYISFTVVYVNDDWKMVTLALSCSKKQGATKGDDLAKSIKTMIKNH
GLTGHVVVCNTDCEPSMVKAGRILTDDAVLMHVGCTCHRIECVTALVFDG
PGVKKSMALARAVVTRYTKSSQAAGRLQELCGIVGIIPLKVIQDVETRWW
STQSMIERLVYLRRAVELHESLDNVAPLLGPVDWNVLELLEPVLAPFMYV
QKKLESNNVTGSLVVPLICDL
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mRNA from alignment at F-serratus_M_contig1422:4378..5217-

Legend: UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig1422.3036.1 ID=mRNA_F-serratus_M_contig1422.3036.1|Name=mRNA_F-serratus_M_contig1422.3036.1|organism=Fucus serratus male|type=mRNA|length=840bp|location=Sequence derived from alignment at F-serratus_M_contig1422:4378..5217- (Fucus serratus male)
GTGGTGGACAACAAGTTCTTTCGAGACATGGTGCGCACGCTTAAAGGCAG GGCCAGCATACCACAGCGACGTGTTCTAATCACCCGGATGGAGGAAATTC TAGTGGACCTTCAAGGGTCGGTCGCCACCATGCTGATGGGCCAGTATGTC TCCATGACCACGGACGGATGGACGTCACGCGCCAACGAGTCCTACATTTC CTTCACCGTCGTGTACGTCAATGACGATTGGAAGATGGTGACGCTCGCGC TCAGCTGTTCGAAGAAACAAGGTGCGACGAAGGGGGATGACCTGGCTAAA TCTATCAAGACCATGATCAAAAACCACGGCCTCACCGGGCACGTGGTCGT GTGCAACACGGACTGCGAGCCGTCAATGGTGAAGGCGGGTCGCATTCTCA CCGATGATGCCGTATTGATGCACGTTGGGTGCACCTGTCACCGGATTGAG TGCGTGACGGCGCTGGTCTTCGACGGGCCCGGCGTGAAGAAGTCCATGGC TCTAGCTCGTGCCGTGGTGACTCGCTACACGAAGTCCTCACAGGCTGCAG GGCGACTTCAGGAGTTGTGCGGTATAGTCGGCATTATCCCTTTGAAGGTA ATTCAGGACGTAGAGACGCGGTGGTGGTCGACGCAGTCGATGATCGAGCG CCTGGTGTACCTTCGACGTGCTGTTGAGCTGCATGAGTCCCTGGACAACG TCGCCCCCCTGCTAGGGCCGGTGGACTGGAACGTCCTGGAGCTGCTCGAG CCTGTACTTGCGCCGTTCATGTACGTCCAAAAAAAGCTCGAGTCCAACAA CGTGACGGGAAGCTTGGTCGTGCCGCTCATCTGTGACCTC
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Coding sequence (CDS) from alignment at F-serratus_M_contig1422:4378..5217-

>mRNA_F-serratus_M_contig1422.3036.1 ID=mRNA_F-serratus_M_contig1422.3036.1|Name=mRNA_F-serratus_M_contig1422.3036.1|organism=Fucus serratus male|type=CDS|length=1626bp|location=Sequence derived from alignment at F-serratus_M_contig1422:4378..5217- (Fucus serratus male)
ATGGTGCGCACGCTTAAAGGCAGGGCCAGCATACCACAGCGACGTGTTCT
AATCACCCGGATGGAGGAAATTCTAGTGGACCTTCAAGGGTCGGTCGCCA
CCATGCTGATGGGCCAGTATGTCTCCATGACCACGGACGGATGGACGTCA
CGCGCCAACGAGTCCTACATTTCCTTCACCGTCGTGTACGTCAATGACGA
TTGGAAGATGGTGACGCTCGCGCTCAGCTGTTCGAAGAAACAAGGTGCGA
CGAAGGGGGATGACCTGGCTAAATCTATCAAGACCATGATCAAAAACCAC
GGCCTCACCGGGCACGTGGTCGTGTGCAACACGGACTGCGAGCCGTCAAT
GGTGAAGGCGGGTCGCATTCTCACCGATGATGCCGTATTGATGCACGTTG
GGTGCACCTGTCACCGGATTGAGTGCGTGACGGCGCTGGTCTTCGACGGG
CCCGGCGTGAAGAAGTCCATGGCTCTAGCTCGTGCCGTGGTGACTCGCTA
CACGAAGTCCTCACAGGCTGCAGGGCGACTTCAGGAGTTGTGCGGTATAG
TCGGCATTATCCCTTTGAAGGTAATTCAGGACGTAGAGACGCGGTGGTGG
TCGACGCAGTCGATGATCGAGCGCCTGGTGTACCTTCGACGTGCTGTTGA
GCTGCATGAGTCCCTGGACAACGTCGCCCCCCTGCTAGGGCCGGTGGACT
GGAACGTCCTGGAGCTGCTCGAGCCTGTACTTGCGCCGTTCATGTACGTC
CAAAAAAAGCTCGAGTCCAACAACGTGACGGGAAGCTTGGTCGTGCCGCT
CATCTGTGACCTCATGGTGCGCACGCTTAAAGGCAGGGCCAGCATACCAC
AGCGACGTGTTCTAATCACCCGGATGGAGGAAATTCTAGTGGACCTTCAA
GGGTCGGTCGCCACCATGCTGATGGGCCAGTATGTCTCCATGACCACGGA
CGGATGGACGTCACGCGCCAACGAGTCCTACATTTCCTTCACCGTCGTGT
ACGTCAATGACGATTGGAAGATGGTGACGCTCGCGCTCAGCTGTTCGAAG
AAACAAGGTGCGACGAAGGGGGATGACCTGGCTAAATCTATCAAGACCAT
GATCAAAAACCACGGCCTCACCGGGCACGTGGTCGTGTGCAACACGGACT
GCGAGCCGTCAATGGTGAAGGCGGGTCGCATTCTCACCGATGATGCCGTA
TTGATGCACGTTGGGTGCACCTGTCACCGGATTGAGTGCGTGACGGCGCT
GGTCTTCGACGGGCCCGGCGTGAAGAAGTCCATGGCTCTAGCTCGTGCCG
TGGTGACTCGCTACACGAAGTCCTCACAGGCTGCAGGGCGACTTCAGGAG
TTGTGCGGTATAGTCGGCATTATCCCTTTGAAGGTAATTCAGGACGTAGA
GACGCGGTGGTGGTCGACGCAGTCGATGATCGAGCGCCTGGTGTACCTTC
GACGTGCTGTTGAGCTGCATGAGTCCCTGGACAACGTCGCCCCCCTGCTA
GGGCCGGTGGACTGGAACGTCCTGGAGCTGCTCGAGCCTGTACTTGCGCC
GTTCATGTACGTCCAAAAAAAGCTCGAGTCCAACAACGTGACGGGAAGCT
TGGTCGTGCCGCTCATCTGTGACCTC
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