mRNA_F-serratus_M_contig142.3032.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig142.3032.1 vs. uniprot
Match: D7FU22_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FU22_ECTSI) HSP 1 Score: 73.9 bits (180), Expect = 4.990e-12 Identity = 54/154 (35.06%), Postives = 76/154 (49.35%), Query Frame = 1
Query: 217 MALTESVKLGGENTKIYSAGTISSQFYEIPDGLVNETLTEDMAIMFMHVLQPAFTHTIRREADPLEWAELVGSIGGTWELLLLLWGIFFI-AKRDEPRFKGRDLVKSAKQGAQTIV------RGATSIATTSTRRNSSVSPTREEDEVVPAWST 657
+ LT+ KL ++T Y A ISS Y+ + A + M + Q + E +PLE AEL G++GG W+LLLLLW IFFI A R +P KGR+ KS +G+ +V AT + + T E++E PAW T
Sbjct: 15 IGLTKEDKLYEDDTASYKALEISSALYKDKRTDNITGIASPYAWLSMEIAQSTDSLEEITEINPLEIAELFGNVGGFWDLLLLLWPIFFISASRQDPHLKGRNFKKSVTRGSDRVVDLTRRVNNATPYRVRRKAGDRKSNATDEDEERPPAWET 168
BLAST of mRNA_F-serratus_M_contig142.3032.1 vs. uniprot
Match: A0A6H5JF84_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JF84_9PHAE) HSP 1 Score: 68.9 bits (167), Expect = 1.660e-10 Identity = 41/108 (37.96%), Postives = 63/108 (58.33%), Query Frame = 1
Query: 217 MALTESVKLGGENTKIYSAGTISSQFY-EIPDGLVNETLTEDMAIMFMHVLQPAFTHTIRREADPLEWAELVGSIGGTWELLLLLWGIFFIA-KRDEPRFKGRDLVKS 534
+ LT +K G+ Y A +I+S Y + DG +T+ A + M + Q + I EADP E+AE++G+IGG W+L+L+LW +FF+A + EP K R+ KS
Sbjct: 49 IGLTNQIKYTGDIISSYKAVSINSGVYKDQADG----DITKPYARLSMELKQQFDSWEIITEADPFEFAEILGNIGGFWDLILILWPLFFVAASQPEPNLKPRNFAKS 152
BLAST of mRNA_F-serratus_M_contig142.3032.1 vs. uniprot
Match: D7FXH8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXH8_ECTSI) HSP 1 Score: 69.7 bits (169), Expect = 3.200e-10 Identity = 38/107 (35.51%), Postives = 62/107 (57.94%), Query Frame = 1
Query: 217 MALTESVKLGGENTKIYSAGTISSQFYEIPDGLVNETLTEDMAIMFMHVLQPAFTHTIRREADPLEWAELVGSIGGTWELLLLLWGIFFIA-KRDEPRFKGRDLVKS 534
+ LT +K ++ Y A +I+S Y+ + +T+ A + M + Q + I EADP E+AE++G+IGG W+L+L+LW +FF+A + EP K R+ KS
Sbjct: 227 IGLTNQIKYAADDVSSYKAVSINSGVYK---DQADADITKPYARLSMELKQQFDSWEIITEADPFEFAEILGNIGGFWDLILILWPLFFVAASQPEPNLKPRNFAKS 330
BLAST of mRNA_F-serratus_M_contig142.3032.1 vs. uniprot
Match: A0A6H5K6D1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6D1_9PHAE) HSP 1 Score: 68.9 bits (167), Expect = 4.490e-10 Identity = 46/146 (31.51%), Postives = 78/146 (53.42%), Query Frame = 1
Query: 217 MALTESVKLGGENTKIYSAGTISSQFYEIPDGLVNETLTEDMAIMFMHVLQPAFTHTIRREADPLEWAELVGSIGGTWELLLLLWGIFFIA-KRDEPRFKGRDLVKSAKQGAQTIVRGATSIATTSTRRNSSVSPTREEDEVVPAW 651
+ +T +LG E A ++S+ + VN + + A + + Q + + E DP + AE+ G++GG W+LL+L+W IFF+A R +P K R+ KS +G Q + G + T TR++ S++P E++EV P W
Sbjct: 170 IGVTIEERLGEEPVATNKALSVSTATHR---DKVNAAIDKPYAQLSLQFQQEPNSLEVITENDPFDLAEMFGNVGGFWDLLMLVWPIFFVAASRQDPHLKPRNFKKSVAKGLQGLRVGE--VVTPWTRKDGSINP--EDEEVKPHW 308
BLAST of mRNA_F-serratus_M_contig142.3032.1 vs. uniprot
Match: D7G5W1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5W1_ECTSI) HSP 1 Score: 66.6 bits (161), Expect = 1.780e-9 Identity = 45/122 (36.89%), Postives = 67/122 (54.92%), Query Frame = 1
Query: 214 AMALTESVKLGGENTKIYSAGTISSQFYEIPDGLVNE---TLTEDMAIMFMHVLQ-PAFTHTIRREADPLEWAELVGSIGGTWELLLLLWGIFFIA-KRDEPRFKGRDLVKSAKQGAQTIVR 564
A+ALTE+ KL G + Y A TI S Y V E ++T A + + + Q P TI +A P+ EL+G IGG W++LLLLW +FF+ ++EP K R+ KS ++G + +
Sbjct: 90 ALALTETKKLDGTTERSYRADTIYS--YPYVSDQVGENISSITRPYAFIDLRIKQGPNSLETITEDA-PVTIGELLGDIGGFWDILLLLWPVFFVVVSQEEPTLKPRNFRKSLQRGTGRVTK 208
BLAST of mRNA_F-serratus_M_contig142.3032.1 vs. uniprot
Match: D7FU23_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FU23_ECTSI) HSP 1 Score: 67.0 bits (162), Expect = 2.970e-9 Identity = 42/116 (36.21%), Postives = 62/116 (53.45%), Query Frame = 1
Query: 217 MALTESVKLGGENTKIYSAGTISSQFYEIPDGLVNETLTEDMAIMFMHVLQPAFTHTIRREADPLEWAELVGSIGGTWELLLLLWGIFFI-AKRDEPRFKGRDLVKSAKQGAQTIV 561
+ LT+ KL ++T Y A SS Y+ + A + M + Q + E +PLE AEL G++GG W+LLL+LW IFFI A R +P K R+ KS +G++ +V
Sbjct: 208 IGLTKEDKLYEDDTASYKALETSSAIYKDKRTDNITGIASPYAWLSMEIAQTTDSLEEITEINPLEIAELFGNVGGFWDLLLMLWPIFFISASRQDPHLKVRNFKKSVTRGSEVVV 323
BLAST of mRNA_F-serratus_M_contig142.3032.1 vs. uniprot
Match: D8LMD2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LMD2_ECTSI) HSP 1 Score: 66.6 bits (161), Expect = 3.360e-9 Identity = 45/146 (30.82%), Postives = 77/146 (52.74%), Query Frame = 1
Query: 217 MALTESVKLGGENTKIYSAGTISSQFYEIPDGLVNETLTEDMAIMFMHVLQPAFTHTIRREADPLEWAELVGSIGGTWELLLLLWGIFFIA-KRDEPRFKGRDLVKSAKQGAQTIVRGATSIATTSTRRNSSVSPTREEDEVVPAW 651
M +T +LG E A ++S+ ++ VN + + A + + Q + + E DP + AE+ G++GG W+LL+L+W IFF+A R +P K R+ KS +G + + G + T TR++ S +P E++E P W
Sbjct: 213 MGVTIEERLGEEPVATNKALSVSTATHK---DKVNAAIDKPYAQLSLQFQQEPNSLEVITENDPFDLAEMFGNVGGFWDLLMLVWPIFFVAASRQDPHLKPRNFKKSVAKGLEGLRIGE--LVTAGTRKDGSSNP--EDEEEKPHW 351
BLAST of mRNA_F-serratus_M_contig142.3032.1 vs. uniprot
Match: A0A6H5JN97_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JN97_9PHAE) HSP 1 Score: 65.5 bits (158), Expect = 8.320e-9 Identity = 37/111 (33.33%), Postives = 61/111 (54.95%), Query Frame = 1
Query: 217 MALTESVKLGGENTKIYSAGTISSQFYEIPDGLVNETLTEDMAIMFMHVLQPAFTHTIRREADPLEWAELVGSIGGTWELLLLLWGIFFIA-KRDEPRFKGRDLVKSAKQG 546
+ LT +KLG E A ++S+ + VN + + A + + V Q +H E DPL+ AE+ G++GG W+LL+++W IFF+A R +P K R+ +S +G
Sbjct: 212 IGLTTEIKLGQEPIVSNKALSVSTATVKHE---VNPAIVKPYAQLSLQVQQAPNSHECITEVDPLDLAEMFGNVGGFWDLLMIIWPIFFVAASRQDPHLKPRNFKESVTKG 319
BLAST of mRNA_F-serratus_M_contig142.3032.1 vs. uniprot
Match: A0A6H5JND4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JND4_9PHAE) HSP 1 Score: 65.5 bits (158), Expect = 9.010e-9 Identity = 40/119 (33.61%), Postives = 64/119 (53.78%), Query Frame = 1
Query: 217 MALTESVKLGGENTKIYSAGTISSQFY---EIPDGLVNETLTEDMAIMFMHVLQPAFTHTIRREADPLEWAELVGSIGGTWELLLLLWGIFFIA-KRDEPRFKGRDLVKSAKQGAQTIV 561
+ALTE+ KL G + Y A TI S Y ++ + + N +T A + + + Q + E P+ EL+G IGG W++LLLLW +FF+ + +P K RD KS ++G ++
Sbjct: 232 LALTETKKLDGTTDRSYRAETIYSNPYVSDQVGEDISN--ITRPYAFIDLRIKQGPNSLEFITEDSPVSIGELLGDIGGFWDVLLLLWPVFFVVVSQQDPTLKPRDFRKSLQRGTGRVM 348
BLAST of mRNA_F-serratus_M_contig142.3032.1 vs. uniprot
Match: A0A6H5K474_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K474_9PHAE) HSP 1 Score: 62.4 bits (150), Expect = 1.010e-7 Identity = 39/114 (34.21%), Postives = 61/114 (53.51%), Query Frame = 1
Query: 217 MALTESVKLGGE---NTKIYSAGTISSQFYEIPDGLVNETLTEDMAIMFMHVLQPAFTHTIRREADPLEWAELVGSIGGTWELLLLLWGIFFIA-KRDEPRFKGRDLVKSAKQG 546
+ +T KLG E N K S T + + D VN + + A + + V Q + + E DPL+ AE+ G++GG W+LL+++W IFF+A R +P K R+ KS +G
Sbjct: 252 IGVTTEDKLGQEPIVNNKALSVSTAT-----VKDE-VNPAIVKPYAQLSLQVQQEPNSLEVITEVDPLDLAEMFGNVGGFWDLLMIMWPIFFVAASRQDPHLKPRNFKKSVNKG 359 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig142.3032.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 12
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig142.3032.1 >prot_F-serratus_M_contig142.3032.1 ID=prot_F-serratus_M_contig142.3032.1|Name=mRNA_F-serratus_M_contig142.3032.1|organism=Fucus serratus male|type=polypeptide|length=169bp MKYVDMQAMALTESVKLGGENTKIYSAGTISSQFYEIPDGLVNETLTEDMback to top mRNA from alignment at F-serratus_M_contig142:623744..626676+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig142.3032.1 ID=mRNA_F-serratus_M_contig142.3032.1|Name=mRNA_F-serratus_M_contig142.3032.1|organism=Fucus serratus male|type=mRNA|length=2933bp|location=Sequence derived from alignment at F-serratus_M_contig142:623744..626676+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig142:623744..626676+ >mRNA_F-serratus_M_contig142.3032.1 ID=mRNA_F-serratus_M_contig142.3032.1|Name=mRNA_F-serratus_M_contig142.3032.1|organism=Fucus serratus male|type=CDS|length=1014bp|location=Sequence derived from alignment at F-serratus_M_contig142:623744..626676+ (Fucus serratus male)back to top |