mRNA_F-serratus_M_contig1022.299.1 (mRNA) Fucus serratus male
Overview
Homology
BLAST of mRNA_F-serratus_M_contig1022.299.1 vs. uniprot
Match: D7FIL8_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FIL8_ECTSI) HSP 1 Score: 240 bits (612), Expect = 9.240e-65 Identity = 179/480 (37.29%), Postives = 242/480 (50.42%), Query Frame = 1 Query: 361 AAVYSVPPIWKAFARSRSVFADQPDQGPLHKWQAFQKENSIPSDFQTWYSTQVLGNRSVPQAFNVPGLPSGFPEFCHWVADGHHKSSGDSLIAGFQSMAERHVNQVKAE-EAVSASQ--------------------------------------SPRGQPPFGGGGSVDPKARKRERRSKKGGTVVNGSDFIEKMKNALDGLDKEVELDDPPQRAERKKGRGGREGGFGVDGYPGATAVGRASGAGARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLPSGTQAMAESLRRARAFRRRSERQAELLERELEMCLARMARVEAQYRSLSAEARGKECSLNSALESALPLVQKAQVLIDSGSHQQGVERYDDVIKLLEVHVNESTQPGRESE--ELLQAREMLWLALCNRSITNMVLGDNYSGMRDIVRAEYVWPNDNVRDLRRRIEDFGKTQSRGTAS---NWRIFRIP 1668 AA V P+W AFA+SR A++ L KWQ+F K+ + F WYS QVLG+RSVPQA + LP+GFPEFCHWVA +H S G + AGF+ A+ +V QV+ E + V S +P +PP G G +DPKARKR+RR++KGGTV NG + +K++ + L+ DD DG G A +A AG R LP+GT M L+RARA+RRR++RQ E LE ELE CL R+ARVE QY +L AE G+E SL S L A PLV+++ L+ +G + ++ YDD +KLLEVHV+++ + RE+E E +ARE+L LALCNRS+ + LGD YSGMRD RA P ++ +R +D+ Q+ G A+ W F P Sbjct: 117 AATSGVSPLWTAFAKSREG-AERLGFTALKKWQSFAKD--MLKGFPDWYSDQVLGSRSVPQALMIEELPNGFPEFCHWVAAENHTSCGVKVKAGFEPFAKTYVKQVEDEGKPVGRSSPPPXXXXXXXXXXXXXXXXGGMAAGAATAGGVTFRSGTAPASEPPLGAG--LDPKARKRDRRARKGGTVGNGPNIAQKLQTVITELEGVTGSDD-------------------YDGRKGGAAA-KAMAAGNRAEDEVRDLMRGEDIIDESAAATGVEVLGPAFADS-----SLPNGTLTMLSHLKRARAYRRRADRQQECLENELERCLGRLARVEKQYLALVAETSGQESSLASCLARARPLVKQSFELVGAGDARLAMDGYDDAVKLLEVHVDKAQRGRREAETPEGKEARELLGLALCNRSVASFRLGDCYSGMRDAERAASECPCPMAQEQLKRSKDY--LQALGGAAAPPKWAAFAGP 564 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1022.299.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 1
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig1022.299.1 >prot_F-serratus_M_contig1022.299.1 ID=prot_F-serratus_M_contig1022.299.1|Name=mRNA_F-serratus_M_contig1022.299.1|organism=Fucus serratus male|type=polypeptide|length=510bp MEGKQYDELPPLTEDSDEDESQQSSESEAESPSPGAKRPPSAAHNSRTADback to top mRNA from alignment at F-serratus_M_contig1022:64150..87379- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig1022.299.1 ID=mRNA_F-serratus_M_contig1022.299.1|Name=mRNA_F-serratus_M_contig1022.299.1|organism=Fucus serratus male|type=mRNA|length=23230bp|location=Sequence derived from alignment at F-serratus_M_contig1022:64150..87379- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig1022:64150..87379- >mRNA_F-serratus_M_contig1022.299.1 ID=mRNA_F-serratus_M_contig1022.299.1|Name=mRNA_F-serratus_M_contig1022.299.1|organism=Fucus serratus male|type=CDS|length=3060bp|location=Sequence derived from alignment at F-serratus_M_contig1022:64150..87379- (Fucus serratus male)back to top |