mRNA_F-serratus_M_contig1022.297.1 (mRNA) Fucus serratus male
Overview
Homology
BLAST of mRNA_F-serratus_M_contig1022.297.1 vs. uniprot
Match: A0A6H5JXN5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXN5_9PHAE) HSP 1 Score: 132 bits (333), Expect = 4.360e-35 Identity = 72/171 (42.11%), Postives = 89/171 (52.05%), Query Frame = -2 Query: 356 MPCAAGALCAAIPDHTPGPPLFTIHKCR-TCGSYLRGLCGLPDPLGDNEMQCVCHGCVNSNNRKESSAV-----------------------------------------PAAGAASSKRLRPERQFGDLEGIAERCSMAGVSYHLRKAKLAWMSEAGSKKTKQTRMADFM 742 MPCAAG+ C A+PDHTPGPP FT H+CR CG YL G CG+ DP G +EM +CH C++S R S + P A A+ FG+LE AE+C M+ VS+HLRKAKLAWMS GS++TKQT M DF+ Sbjct: 1 MPCAAGSRCTAVPDHTPGPPAFTNHQCRGVCGQYLHGTCGVVDPQGTSEMHRICHNCLSSRERMTSGEMVEDLCDENLVDMDRSSDDEXXXLVELRQSGXXXXXXXXXXXPYANVAT--------HFGELEDTAEKCRMSEVSFHLRKAKLAWMSAYGSRETKQTCMRDFL 163
BLAST of mRNA_F-serratus_M_contig1022.297.1 vs. uniprot
Match: A0A6H5JTV4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTV4_9PHAE) HSP 1 Score: 125 bits (313), Expect = 6.000e-33 Identity = 55/77 (71.43%), Postives = 60/77 (77.92%), Query Frame = -2 Query: 512 MPCAAGALCAAIPDHTPGPPLFTIHKCRTCGSYLRGLCGLPDPLGDNEMQCVCHGCVNSNNRKESSAVPAAGAASSK 742 MPCAAG+ C A PDHTPGPPL T H CR CG YL GLCG+PDP+GDNEM VCHGCVNS+N KE+S A AASSK Sbjct: 1 MPCAAGSRCLATPDHTPGPPLLTNHPCRVCGGYLHGLCGVPDPVGDNEMHLVCHGCVNSSNCKETSTDSTARAASSK 77
BLAST of mRNA_F-serratus_M_contig1022.297.1 vs. uniprot
Match: A0A6H5JZK0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZK0_9PHAE) HSP 1 Score: 122 bits (306), Expect = 3.600e-31 Identity = 60/99 (60.61%), Postives = 67/99 (67.68%), Query Frame = -2 Query: 446 MPCAAGALCAAIPDHTPGPPLFTIHKCRTCGSYLRGLCGLPDPLGDNEMQCVCHGCVNSNNRKESSAVPAAGAASSKRLRPERQFGDLEGIAERCSMAG 742 MPCAAG+ C A PDH P PPLFT H CR CG +L GLCG+ D LGD+EM VCHGCVNS+NRKESS AGAASSK P+ G G +R S G Sbjct: 1 MPCAAGSRCLATPDHAPAPPLFTNHPCRVCGGHLHGLCGVHDLLGDDEMHRVCHGCVNSSNRKESSTDSTAGAASSKHPCPD---GRATGKEKRASALG 96
BLAST of mRNA_F-serratus_M_contig1022.297.1 vs. uniprot
Match: A0A6H5K2E1_9PHAE (HTH CENPB-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2E1_9PHAE) HSP 1 Score: 130 bits (327), Expect = 9.330e-31 Identity = 61/89 (68.54%), Postives = 67/89 (75.28%), Query Frame = -2 Query: 476 MPCAAGALCAAIPDHTPGPPLFTIHKCRTCGSYLRGLCGLPDPLGDNEMQCVCHGCVNSNNRKESSAVPAAGAASSKRLRPERQFGDLE 742 MPCAAG+ C A PDHTPGPPLFT H CR CG YL GLCG+ D LGDNEM VCHGCVNS+NRKESS AGAASSKR P+ + + E Sbjct: 1 MPCAAGSRCLATPDHTPGPPLFTNHPCRVCGGYLYGLCGVHDLLGDNEMHRVCHGCVNSSNRKESSTDSTAGAASSKRPCPDGRATEKE 89
BLAST of mRNA_F-serratus_M_contig1022.297.1 vs. uniprot
Match: A0A6H5L326_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L326_9PHAE) HSP 1 Score: 120 bits (300), Expect = 4.080e-30 Identity = 71/162 (43.83%), Postives = 87/162 (53.70%), Query Frame = -2 Query: 350 MPCAAGALCAAIPDHTPGPPLFTIHKCR-TCGSYLRGLCGLPDPLGDNEMQCVCHGCVNSNNRKESSAVPA------AGAASSKRLRPERQ------------------------FGDLEGIAERCSMAGVSYHLRKAKLAWMSEAGSKKTKQTRMADFM*R 742 MPCAAG C +PD TPGPP FTIHKCR C YL G+CG+ DPLG E+ +CH C S R+ S A A +G++ +K + Q F +LE IAE+C M SYHLRKAKLAWMS G+ TKQT + D+ R Sbjct: 1 MPCAAGDRCT-MPDETPGPPHFTIHKCRGVCRQYLHGICGVVDPLGTTEVHRICHTCAASRERETSGAGTAGSQPEKSGSSGAKDVDLVEQGEAGQQSLAAAXXXXXPHANVAQHFCELEDIAEKCYMPKASYHLRKAKLAWMSAHGAGATKQTCIQDYFKR 161
BLAST of mRNA_F-serratus_M_contig1022.297.1 vs. uniprot
Match: A0A6H5K2U1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2U1_9PHAE) HSP 1 Score: 98.2 bits (243), Expect = 1.820e-20 Identity = 52/71 (73.24%), Postives = 58/71 (81.69%), Query Frame = -2 Query: 287 QFGDLEGIAERCSMAGVSYHLRKAKLAWMSEAGSKKTKQTRMADFM*RCRS*CRQAYVMDVC--PLKAKIY 493 QFGDLE IA+RCSMAG++YHLRKAKLAWMSEAGSKKTKQT MADFM CRS C QA MDV +K ++Y Sbjct: 225 QFGDLEEIAKRCSMAGIAYHLRKAKLAWMSEAGSKKTKQTCMADFMSSCRS-CPQAMFMDVFFPYIKVRVY 294
BLAST of mRNA_F-serratus_M_contig1022.297.1 vs. uniprot
Match: A0A6H5KKH9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKH9_9PHAE) HSP 1 Score: 90.5 bits (223), Expect = 2.020e-19 Identity = 47/89 (52.81%), Postives = 54/89 (60.67%), Query Frame = -2 Query: 479 MPCAAGALCAAIPDHTPGPPLFTIHKCR-TCGSYLRGLCGLPDPLGDNEMQCVCHGCVNSNNRKESSAVPAAGAASSKRLRPERQFGDL 742 MPCAAG C +PD TPGPP FTIHKC CG YLRG+CG+ DPLG E+ +CH C S R E+S AGA K E + DL Sbjct: 1 MPCAAGDPCT-VPDDTPGPPHFTIHKCSGVCGQYLRGICGVVDPLGTTEVHRICHTCAASRER-ETSGAGTAGAQPEKSGSSEAKDVDL 87
BLAST of mRNA_F-serratus_M_contig1022.297.1 vs. uniprot
Match: A0A6H5JB59_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JB59_9PHAE) HSP 1 Score: 91.7 bits (226), Expect = 1.240e-17 Identity = 44/47 (93.62%), Postives = 46/47 (97.87%), Query Frame = -2 Query: 356 RQFGDLEGIAERCSMAGVSYHLRKAKLAWMSEAGSKKTKQTRMADFM 496 R+FGDLE IAERCSMAGV+YHLRKAKLAWMSEAGSKKTKQTRMADFM Sbjct: 341 RKFGDLEEIAERCSMAGVAYHLRKAKLAWMSEAGSKKTKQTRMADFM 387
BLAST of mRNA_F-serratus_M_contig1022.297.1 vs. uniprot
Match: A0A6H5J7Q2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J7Q2_9PHAE) HSP 1 Score: 84.3 bits (207), Expect = 3.110e-17 Identity = 49/71 (69.01%), Postives = 52/71 (73.24%), Query Frame = -3 Query: 493 RTTRRALHCLRSTNAVPAEATFVDCAVCRTRLGTMRCNVFATDASTRTTARNRAQFLLLGLRLRSASARKG 705 RTT CLR+TNAV AEATF+D AVC TRL T RC V ATD STR TARN+AQ LLGL LRSA AR G Sbjct: 13 RTTHPPPRCLRTTNAVSAEATFMDSAVCMTRLATTRCTVIATDVSTRATARNQAQTRLLGLHLRSAPARAG 83
BLAST of mRNA_F-serratus_M_contig1022.297.1 vs. uniprot
Match: A0A6H5JYN7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYN7_9PHAE) HSP 1 Score: 85.1 bits (209), Expect = 1.380e-16 Identity = 49/86 (56.98%), Postives = 54/86 (62.79%), Query Frame = -2 Query: 410 CRTCGSYLRGLCGLPDPLGDNEMQCVCHGCVNSNNRKESSAVPAAGAASSKRLRP-ERQFGDLEGIAERCSMAGVSYHLRKAKLAW 664 CR CGSYL GLCG+ DPLGDNEM VCH CVNS+NRKESS A AASSKR P ER G + S+ V RK K +W Sbjct: 3 CRVCGSYLHGLCGVHDPLGDNEMHRVCHRCVNSSNRKESSTDSTAWAASSKRPCPDERATGKEKRAGALGSLKPVGNTARK-KSSW 87 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1022.297.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 13
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig1022.297.1 >prot_F-serratus_M_contig1022.297.1 ID=prot_F-serratus_M_contig1022.297.1|Name=mRNA_F-serratus_M_contig1022.297.1|organism=Fucus serratus male|type=polypeptide|length=142bp MRERLKPTMVQLSLPVKVKHLQYILAFNGQTSMTYACRHQLLQRYMKSAMback to top mRNA from alignment at F-serratus_M_contig1022:36640..37439+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig1022.297.1 ID=mRNA_F-serratus_M_contig1022.297.1|Name=mRNA_F-serratus_M_contig1022.297.1|organism=Fucus serratus male|type=mRNA|length=800bp|location=Sequence derived from alignment at F-serratus_M_contig1022:36640..37439+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig1022:36640..37439+ >mRNA_F-serratus_M_contig1022.297.1 ID=mRNA_F-serratus_M_contig1022.297.1|Name=mRNA_F-serratus_M_contig1022.297.1|organism=Fucus serratus male|type=CDS|length=852bp|location=Sequence derived from alignment at F-serratus_M_contig1022:36640..37439+ (Fucus serratus male)back to top |