mRNA_F-serratus_M_contig1414.2991.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig1414.2991.1
Unique NamemRNA_F-serratus_M_contig1414.2991.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
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BLAST of mRNA_F-serratus_M_contig1414.2991.1 vs. uniprot
Match: D8LT06_ECTSI (RRM domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LT06_ECTSI)

HSP 1 Score: 241 bits (615), Expect = 1.330e-72
Identity = 129/157 (82.17%), Postives = 134/157 (85.35%), Query Frame = 1 
Query:  334 PDVEGIPNETLFVGNLSYRVSEAVIIKLFTPFGKVVREQFCYHHVGPRRGEPRGFCFVEYSNVDEATKAIRALHGRKLYGRPLRVRYMAVEGASRMDYSTSDSTEQRSSS-SGATLSAGGKIPPPTSAAGEAGIGAGVTKLSLDKKVALLKLKLREA 801
            PDVEGIPNETLFVGNLSYRVSEAVIIKLFTPFGKVVREQFCYH VGPR GEPRGFCFVEYSNVD+A KAIRALHGRKLYGRPLRVR+M VEG  RMDYST+DS    ++S S  T   G KIPP   A GEAG  AGVTKLSLDKKVALLKLKLREA
Sbjct:  118 PDVEGIPNETLFVGNLSYRVSEAVIIKLFTPFGKVVREQFCYHKVGPRLGEPRGFCFVEYSNVDDAAKAIRALHGRKLYGRPLRVRFMTVEGKGRMDYSTTDSKGSTATSGSFGTYGDGAKIPPTPGAGGEAGAAAGVTKLSLDKKVALLKLKLREA 274
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BLAST of mRNA_F-serratus_M_contig1414.2991.1 vs. uniprot
Match: A0A803MKS2_CHEQI (RRM domain-containing protein n=4 Tax=Chenopodium quinoa TaxID=63459 RepID=A0A803MKS2_CHEQI)

HSP 1 Score: 97.4 bits (241), Expect = 4.920e-20
Identity = 47/92 (51.09%), Postives = 63/92 (68.48%), Query Frame = 1 
Query:  328 SLPDVEGIPNET----LFVGNLSYRVSEAVIIKLFTPFGKVVREQFCYHHVGPRRGEPRGFCFVEYSNVDEATKAIRALHGRKLYGRPLRVR 591
            S  D+ G+ NET    ++VGN+ +R+SEA ++K+F+PFGK+  E F  H  GP+RGEPRGF FV+YS  +EA  A   +HGR   GRPL VR
Sbjct:    9 SRKDLNGMSNETSDRRIYVGNIDHRISEATLLKMFSPFGKIESEDFLLHTRGPKRGEPRGFAFVQYSTKEEARLAKEKMHGRLACGRPLVVR 100
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BLAST of mRNA_F-serratus_M_contig1414.2991.1 vs. uniprot
Match: A0A565CPV0_9BRAS (RRM domain-containing protein n=1 Tax=Arabis nemorensis TaxID=586526 RepID=A0A565CPV0_9BRAS)

HSP 1 Score: 97.1 bits (240), Expect = 5.040e-20
Identity = 44/103 (42.72%), Postives = 67/103 (65.05%), Query Frame = 1 
Query:  331 LPDVEGIPNET----LFVGNLSYRVSEAVIIKLFTPFGKVVREQFCYHHVGPRRGEPRGFCFVEYSNVDEATKAIRALHGRKLYGRPLRVRYMAVEGASRMDY 627
            +PD  G  +E     L+VGNL  R++EA ++K+F+P+GK++ E F +H  GP++GEPRG+ FV+YS  +EA  A+  +HGR   GRPL VR+ + +      Y
Sbjct:    1 MPDTGGFVDEKNESRLYVGNLDLRINEAALLKMFSPYGKIISEDFLWHTRGPKKGEPRGYAFVQYSRKEEAEVAVEKMHGRLACGRPLVVRFASEKHLEESSY 103
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BLAST of mRNA_F-serratus_M_contig1414.2991.1 vs. uniprot
Match: A0A169WBX9_DAUCS (RRM domain-containing protein n=3 Tax=Daucus carota subsp. sativus TaxID=79200 RepID=A0A169WBX9_DAUCS)

HSP 1 Score: 97.4 bits (241), Expect = 7.590e-20
Identity = 45/91 (49.45%), Postives = 64/91 (70.33%), Query Frame = 1 
Query:  364 LFVGNLSYRVSEAVIIKLFTPFGKVVREQFCYHHVGPRRGEPRGFCFVEYSNVDEATKAIRALHGRKLYGRPLRVRYMA----VEGASRMD 624
            L++GNL +R++EA +IK+F+PFG +V E F +H  GP+RGEPRG+ FV+Y  V+EA  A   +HG+ +YGRPL VR  +    V+GA   D
Sbjct:   45 LYIGNLDFRITEAALIKMFSPFGTIVSEDFLWHTRGPKRGEPRGYAFVQYRTVEEAKLAKEKVHGKLVYGRPLVVRLASEKDLVDGAGSSD 135
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BLAST of mRNA_F-serratus_M_contig1414.2991.1 vs. uniprot
Match: A0A7J6EDI8_CANSA (RRM domain-containing protein n=5 Tax=Cannabis sativa TaxID=3483 RepID=A0A7J6EDI8_CANSA)

HSP 1 Score: 97.1 bits (240), Expect = 8.490e-20
Identity = 50/105 (47.62%), Postives = 67/105 (63.81%), Query Frame = 1 
Query:  364 LFVGNLSYRVSEAVIIKLFTPFGKVVREQFCYHHVGPRRGEPRGFCFVEYSNVDEATKAIRALHGRKLYGRPLRVRYMA----VEGASRMDYSTSDSTEQRSSSS 666
            L++GNL  R++EA +IK+F+PFGK+V E F +H  GP+RGEPRGF FVEYS  +EA  A   +HGR   GRPL V   +    VE A       S++ + R+S S
Sbjct:   35 LYIGNLDLRITEAALIKMFSPFGKIVSEDFIWHTRGPKRGEPRGFAFVEYSTKEEARLAKEKMHGRLACGRPLIVHLASNKYTVESAEHSSKGVSETNKARTSGS 139
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BLAST of mRNA_F-serratus_M_contig1414.2991.1 vs. uniprot
Match: W7TJX2_9STRA (Polyadenylate-binding protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TJX2_9STRA)

HSP 1 Score: 97.1 bits (240), Expect = 9.160e-20
Identity = 53/114 (46.49%), Postives = 69/114 (60.53%), Query Frame = 1 
Query:  301 GAGAAGTGESLP---DVEGIPNETLFVGNLSYRVSEAVIIKLFTPFGKVVREQFCYHHVGPRRGEPRGFCFVEYSNVDEATKAIRALHGRKLYGRPLRVRYMAVEGASRMDYST 633
            GAGA   G+  P    + G P   LF+G+L+  V E  ++ LF P+GKVV   F +H  GPR+GEP+GFCFV Y+  +EAT AIRAL  R+L+GR + VRY        MD  T
Sbjct:    8 GAGARNAGKDDPAEDPLAGRPGPKLFIGSLAKSVQEKDVLNLFLPYGKVVDIAFFWHMHGPRKGEPKGFCFVTYARTEEATSAIRALDRRRLHGRSIAVRYQRDADDMNMDART 121
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BLAST of mRNA_F-serratus_M_contig1414.2991.1 vs. uniprot
Match: A0A2P5FGT7_TREOI (Splicing factor-like protein n=1 Tax=Trema orientale TaxID=63057 RepID=A0A2P5FGT7_TREOI)

HSP 1 Score: 96.3 bits (238), Expect = 9.460e-20
Identity = 62/159 (38.99%), Postives = 85/159 (53.46%), Query Frame = 1 
Query:  364 LFVGNLSYRVSEAVIIKLFTPFGKVVREQFCYHHVGPRRGEPRGFCFVEYSNVDEATKAIRALHGRKLYGRPLRVRYMAVEGASRMDYSTSDSTEQRSSSSGATLSAGGKIPPPTSAAGEAGIGAGVTKLSLDKKVALLKLKLREATE-KST**THKHE 837
            L+VGNL  R++EA +IK+F+PFGK+V E F +H  GP+RGEPRGF F++YS  +EA  A   +HGR   GRPL VR  + +        +S    + S +S A  S+G                    +LS   K+A +K KL+   E  ST    KHE
Sbjct:   15 LYVGNLDLRITEATLIKMFSPFGKIVSEDFLWHTRGPKRGEPRGFAFIQYSAKEEARLAKEKMHGRLACGRPLVVRLASEKYMVESTEHSSRGVGEASKASAAVSSSG--------------------QLSRSAKIAAIKNKLKALEEDSSTAKKQKHE 153
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BLAST of mRNA_F-serratus_M_contig1414.2991.1 vs. uniprot
Match: A0A7N2MIG0_QUELO (RRM domain-containing protein n=8 Tax=Fagaceae TaxID=3503 RepID=A0A7N2MIG0_QUELO)

HSP 1 Score: 96.7 bits (239), Expect = 9.710e-20
Identity = 50/106 (47.17%), Postives = 68/106 (64.15%), Query Frame = 1 
Query:  364 LFVGNLSYRVSEAVIIKLFTPFGKVVREQFCYHHVGPRRGEPRGFCFVEYSNVDEATKAIRALHGRKLYGRPLRVRYMA----VEGASRMDYSTSDSTEQRSSSSG 669
            L+VGNL  R++EA +IK+F+PFGK+V E F +H  GP+RGEPRGF F++YS  +EA  A   +HG+   GRPL VR  +    VE A ++     DS +   S SG
Sbjct:   16 LYVGNLDLRITEAALIKMFSPFGKIVAEDFLWHTRGPKRGEPRGFAFIQYSTKEEAKLAKEKMHGKLACGRPLVVRLASEKYLVETAEKLSKGVGDSHKTSLSGSG 121
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BLAST of mRNA_F-serratus_M_contig1414.2991.1 vs. uniprot
Match: UPI000C1D519A (probable RNA-binding protein 18 isoform X1 n=1 Tax=Olea europaea var. sylvestris TaxID=158386 RepID=UPI000C1D519A)

HSP 1 Score: 96.3 bits (238), Expect = 1.260e-19
Identity = 57/150 (38.00%), Postives = 86/150 (57.33%), Query Frame = 1 
Query:  364 LFVGNLSYRVSEAVIIKLFTPFGKVVREQFCYHHVGPRRGEPRGFCFVEYSNVDEATKAIRALHGRKLYGRPLRVRYMAVEGASRMDYSTSDSTEQRSSSSGATLSAGGKIPPPTSAAGEAGIGAGVTKLSLDKKVALLKLKLREATEKS 813
            L++GNL  R++EA +IK+F+PFGK+V E F +H+ GP+RGEPRG+ F+++S  +EA  A   +HGR   GRPL VR  + +  S +  ++S +    S SS   LSA G                   ++S   K+A +K KL+   E+S
Sbjct:   15 LYIGNLDLRITEAALIKMFSPFGKIVSEDFLWHNRGPKRGEPRGYAFIQFSTKEEAELAKEKMHGRMACGRPLVVRLASEKYTSEVAANSSKAVGDASRSS---LSASGS-----------------GQISRSAKIAAIKNKLKAMEEES 144
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BLAST of mRNA_F-serratus_M_contig1414.2991.1 vs. uniprot
Match: A0A7C9DAW6_OPUST (RRM domain-containing protein n=1 Tax=Opuntia streptacantha TaxID=393608 RepID=A0A7C9DAW6_OPUST)

HSP 1 Score: 95.9 bits (237), Expect = 1.290e-19
Identity = 55/120 (45.83%), Postives = 72/120 (60.00%), Query Frame = 1 
Query:  337 DVEGIPNET----LFVGNLSYRVSEAVIIKLFTPFGKVVREQFCYHHVGPRRGEPRGFCFVEYSNVDEATKAIRALHGRKLYGRPLRVRYM-------AVEGASRMDYSTSDSTEQRSSS 663
            D+ G+ +E+    L+VGN+ +R+SEA +IK+F+PFGK+  E F  H  GP+RGEPRGF FV+YS   EA  A   +HGR   GRPL VR         A E  S+    T+ ST   SSS
Sbjct:    2 DLNGLSDESSERRLYVGNIDHRISEATLIKMFSPFGKIESEDFLLHTRGPKRGEPRGFAFVQYSTKWEARLAKEKMHGRLACGRPLVVRLASEKSAVEAAENLSKTSVVTNRSTSSSSSS 121
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1414.2991.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LT06_ECTSI1.330e-7282.17RRM domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A803MKS2_CHEQI4.920e-2051.09RRM domain-containing protein n=4 Tax=Chenopodium ... [more]
A0A565CPV0_9BRAS5.040e-2042.72RRM domain-containing protein n=1 Tax=Arabis nemor... [more]
A0A169WBX9_DAUCS7.590e-2049.45RRM domain-containing protein n=3 Tax=Daucus carot... [more]
A0A7J6EDI8_CANSA8.490e-2047.62RRM domain-containing protein n=5 Tax=Cannabis sat... [more]
W7TJX2_9STRA9.160e-2046.49Polyadenylate-binding protein n=1 Tax=Nannochlorop... [more]
A0A2P5FGT7_TREOI9.460e-2038.99Splicing factor-like protein n=1 Tax=Trema orienta... [more]
A0A7N2MIG0_QUELO9.710e-2047.17RRM domain-containing protein n=8 Tax=Fagaceae Tax... [more]
UPI000C1D519A1.260e-1938.00probable RNA-binding protein 18 isoform X1 n=1 Tax... [more]
A0A7C9DAW6_OPUST1.290e-1945.83RRM domain-containing protein n=1 Tax=Opuntia stre... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1414contigF-serratus_M_contig1414:156182..164632 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score246.5
Seed ortholog evalue1.4e-62
Seed eggNOG ortholog2880.D8LT06
Hectar predicted targeting categoryother localisation
EggNOG free text desc.RNA-binding protein
EggNOG OGs29A52@1,2RZNU@2759
Ec32 ortholog descriptionRNA recognition motif domain, eukaryote
Ec32 orthologEc-08_004360.1
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons8
Model size1558
Cds size819
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929401.721023-CDS-F-serratus_M_contig1414:156181..1562491622929401.721023-CDS-F-serratus_M_contig1414:156181..156249Fucus serratus maleCDSF-serratus_M_contig1414 156182..156249 +
1690962834.8358288-CDS-F-serratus_M_contig1414:156181..1562491690962834.8358288-CDS-F-serratus_M_contig1414:156181..156249Fucus serratus maleCDSF-serratus_M_contig1414 156182..156249 +
1622929401.7358975-CDS-F-serratus_M_contig1414:156913..1569701622929401.7358975-CDS-F-serratus_M_contig1414:156913..156970Fucus serratus maleCDSF-serratus_M_contig1414 156914..156970 +
1690962834.8469975-CDS-F-serratus_M_contig1414:156913..1569701690962834.8469975-CDS-F-serratus_M_contig1414:156913..156970Fucus serratus maleCDSF-serratus_M_contig1414 156914..156970 +
1622929401.752512-CDS-F-serratus_M_contig1414:158548..1588121622929401.752512-CDS-F-serratus_M_contig1414:158548..158812Fucus serratus maleCDSF-serratus_M_contig1414 158549..158812 +
1690962834.8562815-CDS-F-serratus_M_contig1414:158548..1588121690962834.8562815-CDS-F-serratus_M_contig1414:158548..158812Fucus serratus maleCDSF-serratus_M_contig1414 158549..158812 +
1622929401.7830107-CDS-F-serratus_M_contig1414:159158..1592631622929401.7830107-CDS-F-serratus_M_contig1414:159158..159263Fucus serratus maleCDSF-serratus_M_contig1414 159159..159263 +
1690962834.8699925-CDS-F-serratus_M_contig1414:159158..1592631690962834.8699925-CDS-F-serratus_M_contig1414:159158..159263Fucus serratus maleCDSF-serratus_M_contig1414 159159..159263 +
1622929401.801148-CDS-F-serratus_M_contig1414:162250..1624361622929401.801148-CDS-F-serratus_M_contig1414:162250..162436Fucus serratus maleCDSF-serratus_M_contig1414 162251..162436 +
1690962834.8816946-CDS-F-serratus_M_contig1414:162250..1624361690962834.8816946-CDS-F-serratus_M_contig1414:162250..162436Fucus serratus maleCDSF-serratus_M_contig1414 162251..162436 +
1622929401.8131778-CDS-F-serratus_M_contig1414:163069..1631571622929401.8131778-CDS-F-serratus_M_contig1414:163069..163157Fucus serratus maleCDSF-serratus_M_contig1414 163070..163157 +
1690962834.8892772-CDS-F-serratus_M_contig1414:163069..1631571690962834.8892772-CDS-F-serratus_M_contig1414:163069..163157Fucus serratus maleCDSF-serratus_M_contig1414 163070..163157 +
1622929401.8254364-CDS-F-serratus_M_contig1414:163765..1638161622929401.8254364-CDS-F-serratus_M_contig1414:163765..163816Fucus serratus maleCDSF-serratus_M_contig1414 163766..163816 +
1690962834.8976474-CDS-F-serratus_M_contig1414:163765..1638161690962834.8976474-CDS-F-serratus_M_contig1414:163765..163816Fucus serratus maleCDSF-serratus_M_contig1414 163766..163816 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929401.8589792-UTR-F-serratus_M_contig1414:163816..1641301622929401.8589792-UTR-F-serratus_M_contig1414:163816..164130Fucus serratus maleUTRF-serratus_M_contig1414 163817..164130 +
1690962834.907478-UTR-F-serratus_M_contig1414:163816..1641301690962834.907478-UTR-F-serratus_M_contig1414:163816..164130Fucus serratus maleUTRF-serratus_M_contig1414 163817..164130 +
1622929401.874066-UTR-F-serratus_M_contig1414:164209..1646321622929401.874066-UTR-F-serratus_M_contig1414:164209..164632Fucus serratus maleUTRF-serratus_M_contig1414 164210..164632 +
1690962834.9183142-UTR-F-serratus_M_contig1414:164209..1646321690962834.9183142-UTR-F-serratus_M_contig1414:164209..164632Fucus serratus maleUTRF-serratus_M_contig1414 164210..164632 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1414.2991.1prot_F-serratus_M_contig1414.2991.1Fucus serratus malepolypeptideF-serratus_M_contig1414 156182..163816 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig1414.2991.1

>prot_F-serratus_M_contig1414.2991.1 ID=prot_F-serratus_M_contig1414.2991.1|Name=mRNA_F-serratus_M_contig1414.2991.1|organism=Fucus serratus male|type=polypeptide|length=273bp
EVVVNTAEHESDVSGRTSNPASRDEEEAELRRRLLEKVHRDRNDAADLKS
GISGTSRSSELSTADLPPAKSRKTGVEDIDDEDASKLSSAGVPSETPKAT
GAGAAGTGESLPDVEGIPNETLFVGNLSYRVSEAVIIKLFTPFGKVVREQ
FCYHHVGPRRGEPRGFCFVEYSNVDEATKAIRALHGRKLYGRPLRVRYMA
VEGASRMDYSTSDSTEQRSSSSGATLSAGGKIPPPTSAAGEAGIGAGVTK
LSLDKKVALLKLKLREATEKST*
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mRNA from alignment at F-serratus_M_contig1414:156182..164632+

Legend: CDSpolypeptideUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig1414.2991.1 ID=mRNA_F-serratus_M_contig1414.2991.1|Name=mRNA_F-serratus_M_contig1414.2991.1|organism=Fucus serratus male|type=mRNA|length=8451bp|location=Sequence derived from alignment at F-serratus_M_contig1414:156182..164632+ (Fucus serratus male)
GAGGTAGTGGTGAATACTGCAGAGCACGAAAGCGATGTTTCGGGACGGAC
GAGCAATCCAGCTAGCAGGTAGACCGGTCTCAACGACATTTTCCAGCGGT
ATTGCTGATGTTGCACCTAGGAAACCACCAAGCCCTTACCCTAAACCATG
GTCGTGATCGAAATGTCATTACCTGGGGTATAGATTGATACACAACATTT
GCTCAAGTTGCTTGGGCTTGTTACCAGGGACAAGTATGGTTTATCTCAGA
TTGACACTAACTATTATTTATAGATAAATGTGCCATTAATAAAATACTGG
AAGTGTTCCTGAAGCTTCAGCTGTGGGAAAGGTTGGGAACCCGCTTAGCT
AATGCGACATATTTAATACCTCCATACATACCTCTACTGATACAGCGTTT
GTACTCGAGCTGCAGTAGCAGGAATGTTGACGTTTGGAGCGGGCTGTATC
TCTGAAACTGCTGTAGCTAGGTCGTTTTCACTCGAAGGTGCCCCTGAGTA
GTTTTGTTCAGTAGAGAGGATTGAAGCAATGAGTGTTGCCTCAAATCTGT
TCCTAACGTCGATTAATTCCACCATGCGAGGTACGCCCCTGAGAGTAGTT
ATGTTGAGTAGAGAGAATTGAAGTATTATTGAGTGCTGCCTCAAATCTGC
TCCCAACGTTGATGAGTTCCACCATACGAGGTACGTAATGAGAGATATTT
CCGCTTTTGCTGTTGCTCTACCCGTGTCATAGGGACGAGGAAGAAGCTGA
GCTCAGACGCAGATTGCTCGAAAAGGTGCATCGGGATAGGTGCGCCACGT
TAGTTGCGAATTCCATGATTTTGTTTTGTTTGTATCTCACTTACTATTAG
AACGGCCGATGGGCCTCAACGTGCTAGGTTACCAACCGCACCTACTGCAA
CGTTGCCATCCTCCCTGTGGTCACAAAGAATCTAGCCATATCTCCCCGTT
TCTCGCCTCGACGACTTTTTATCGCGATGCAACTTCAGCGCTCTGAGGCC
ATCTCTTATGGGCTTGGAATTGGAACTTCGACATACTTAAAATTCAATCA
AAGCCAACCAAGTTCCACTACAGAGAAATTAGTTTTGAGTCGCGAATGCC
CATGTTATGGTTATGGTTGGAACTTTCGGTTTATAGAGATATGGGTCGCG
CATAAGTTTGGGGGCGCGGGGAACTATAGCTGGTGCCCCCTTGTGCCGAC
CAGGTAGCTTTCCGCGCTTATTTTAAATTAAAAAGAGATGTCAAAAATAA
ATTGCTGTGTGGTGCATTTTTTGTAAAGTGCATGTAAAAGACATCAGCAG
GCGGCCTTATATGCACAACGCCACGTAAAGCGCTGCCGCTCCAAATGCTT
GACGTGATATACCCGAGGGGGCTGCTCAAGCTCAACGATAACCCTGGGAG
ACGCCGGCATGTCGGGCACTTCCCTCGGTAACCAAGCTCGGGGGGGGCAC
GGCGGCGATAACGAAAGGCTAAGGTCATCTCTACGTATTTCACCCTAGCT
TTGCAACACGGACATGCTTTGCGCGGGCGGCCGGCGACATCCTTGCCACT
GTATTTGCTGTCATCGACAGCCAGCGCCACCGTCCTTCACGAGCTTCACG
ATCTTGAGAAAGAGCGCGAATGGCACGCGGAAACGTCGGTCTAAACAGCT
TCGTCTCTTTCGACGCGGGATCCTTGAGGGATGACTTCCTCGGCATCTCA
GACCGCTCGCACCCTGCGTGGTTCGGTCTCGGAGGAACCACCCGCCCACT
CGCTGTTCAGCTCTAGTAACAGCTTCATGAGCTCGTCCTCGTCTTATAGA
GATCAGCATGTCCAGCGTCGAAGACCGAATAACGTTTTAGCGGACTGTCG
CTGCGGCTGCGGCAGCTGCTGCCGTCTCGGCTACCTGTACCCGTCTCCCA
GCGCCAGTGGACATGAAGCTGCTGTGTGTTTCGATGTAATCGCTCTGCTC
TCTAGCTGTCTACCTCCCGTGTATCCCTTCAAAACGCGGCGTAACTTCCT
CGAGATGAAGTTCCAAGAAATTTGGCCAAAGTTCCTATCAATAGTCGAGT
TTGAGCTTGGCCGGCGACTTGGATTTTTTTTTTAATTCTTAGGCCAAGTT
CCAAGAAATAAACTCCCTATTTATTATAACAAGGGTTTCTTGGAATTATT
TCTTGGAATTTCGCCAAATCAAAGTTCATGTTAATAGAACGAAATTCTGA
TCCCCATAAGAAAGGGGGTTTTTTTACAACTCGTCAACCGATGGTTGAAT
TTTACTTACTTGTGCTCTCTGGCGGGTGCTACCTTCTGACGTTCAAGTAC
AGCCCGCCTGCTCTTCGCACCAATGCTCGTATCGTGTGTTTTGTGGGGGA
TGTTGGGGGGGAAGCAGGAACGATGCTGCCGATCTTAAAAGCGGTATATC
GGGTACATCTAGATCGTCGGAGTTATCGACAGCTGACCTTCCCCCGGCAA
AATCGCGCAAGACCGGAGTCGAAGATATCGACGACGAGGATGCATCCAAG
TTGTCGTCAGCGGGTGTTCCATCCGAGACGCCTAAGGCGACGGGGGCAGG
GGCAGCAGGGACTGGCGAGTCCTTGCCGGACGTGGAGGGCATCCCGAACG
AGACGCTCTTCGTTGGGAACCTCAGCTACAGGTGAAGCAAGAGCTCTGCT
GCGTTGTTTCAAAAGTAATAAAAAATAGTATTATTACGTACAAAGTCGGG
TTTTGTTTTTTGCCTTTTGTTTCTCTGATGGAGCGCTTTTGGGGGGGAGA
GGTGTGGGCTCTTCTTTATTTTTAGGATCTCTCTGCCGCTGGAGCTCCTT
TTGTGCGGCCGGTCTGTCTCGTATCTACCTTCTGCTTTTTGTTTCTTGGG
AGGAGGCGTTTCCCTTTTTGTCATAGTCTCTCTTTTTTTCCTCTTCCTGC
CCTTTTTTGCTGCCCTCGCCGCCCGCAACCCAACCGCTCCCTCTCTCTCT
CTTTTGCTCTCTGGACGACGCGCGAAGAGTGTCCGAAGCGGTCATCATCA
AACTCTTCACGCCCTTTGGCAAGGTGGTTCGAGAACAGTTCTGCTATCAC
CATGTCGGCCCACGGCGCGGGGAGCCTCGGGGGTAAGGACACTTGCAGGG
AGAGGAGGAACCAATCCATTCTTAAAATTCCCGTCTTGTTATTTGGTTTA
ATACATCAATTTCATTCTCAATATTACCCTCTATGAATAGGTTTAATGCG
TCATTTTCATTCTCAATATTACCCTCTATGAATAGGTTTAATATATCATT
TCCATTCTCAAATGTTACCCTCTATGAATAGGTGTAATCCATAGTTTTCA
TTCTCAATATCACCCTCTATTAATATTAAAAGATTTAATGCATCATTTTC
GTTTTCAATATTACCCTCTTTTAATAGGCTTAATGTATCATATGTATTCT
CCATTCGTCGCCCGAGTGGTCTAGTAGGTAACCTGCACACCTGCTAGTGC
GGAAGTCGTGAGTTCGATTCTTACGAAAGTAGGATTTGTGTTCTTTCTTT
CGTAACGGAAAGCGTGGGAACGTGAGTAAGTAAAATTCAACCATAGGTTG
ACGAATTGCAAGAGTGCTGAACTGCATTCGCGATAAAAATTGTATGGAGG
CGTGAACGAGATGGGAAGATCCTTAATGGCCACAGGCAGGATGGTAATTA
TGAGGTCCATCGGCTATAAATGTGATTGAAATATATATATATATATATAT
ATATATATATATTATATATATATAATAGGTTTAATACATCATTGTCGAAT
AGCACGAAGTGCTCGTAGCTTTTAATGACAGCAGTAGTCGGACCCGCATC
AATATTTTCCTGGATCATAAGGGTAGAGTATGATGTGGCAAGTGCATCAA
TATTGCTATTAAGTAGTTTTGAACCTCAAGCTCAAGTACACGAATAGTGA
CGAGTTTTGCGCACAAGGGAGTGGAACGGAGCGCAAACATTTCGGGGGGC
GGGGGTAAATGTTTTTTTTTCTCCCCTTTAAAGATTGTGTATTCCCGCCT
GGCGTCACGACGCGTTGAACCGATCTGTTGTCCCCCCCCGCGGTTCACAC
CTATCAATAGTCAGCCCCTTCCGCGTTTTGACCGTATCCACCGGTTCAGC
GATCCCCAAACCAGTTTTGCTGGCCCTCGCAGGCTTTCCGCCACAGGGAG
TCCCGCTTTTTACCGAGGTTCTGACATTAATCTGCCACCGCTGTACAACT
ATTATACTATATAGCTTTTAACAGAGCACATGATACATACATGTGTACAC
TGGTAGCTATTAAAGGCTACAAATCTATACGTATAGTTTTCGATATTACT
TTCCGTGTTCAGTGTTGCCGAACAACGCCTCTTTATAATGTGAAAAATGT
AGCTTTTTTCGCTGAACCTCGCTATCTGAGATAGCTGTGGCCACCTCGGA
GATAGGCCCCGCTCTAACACTGTTTGTTTCAGAGACGTGCGAAGTTCTGC
GGTTCTAGGCCCATTCTGTCCGATGATATCGATAAAATTGTCCACGGCCA
AAGTACGAAAAATTTTAAAGTGCGGCGTAATAACGAGACCCGAGTCAACA
TGGGCTAAGATACCGCAGGTACCCTGACTTATGCAACGAAGATTCAGTTG
TCCGGAATCGGATTCACTGGGACTTGGCAGTAGGTAGTCTTGGCATGAAA
GGGTGCGTGTGTATTCGAAAAAAATGTAGGATCACTACCACGTCGGACGT
ATCTGGTATAATCACATTGCTACACGCCCTTCAAGGGTTGCTGAAAACTA
CTTGAAAACAGACTTGACATGGTCATTCCGTACATCGCCCGAGTTAACAA
CTGGTACAGTACTGCTGTATTAATTGTATGTACTACTTGTAGCACAATAT
ACTATTTATAGTATTAAAGCCTAATGAATGTTACTGGTGCTTTTTTGTGC
TTATCACCACGTACTACATTTAATACGTAGCGTGTACCAGATTCAGCCTG
TGCTGTATTCAAGTATGTATGTCAATTCAGATGTCGACTCCGATGCGCGC
AAGGATACAACAACCCCCCTGACTGGGGGATGCCCAGAAGGTCTAGGTTA
GTTCTGATTTTTATTTGAACACGGCCCCGTTTCACATACCAGACTTCGAT
CGCCAATGCTAGCCCCTGGGACACCTGTGTGAATACAGTAGTACATATGT
AATAGACTGCTGTAGTATGAGGGGTAATTGTCTGTGCCTACCGCGTGACT
TGGAAATGATATACCAGCTTGATGTTTTGTACCAAAAACACCAAAAAGCA
ATACAGTGCATACTGGATTCCAGTATGTAGATCAGTACAGATGTAGATTC
CACTGCAAGTACAAAAACAAACGCGACCTCGTTTCACACGCCCGACTTCC
ATCATCGATTTTCACCTGTCCGCCATCTTAAGTGGACTGCCGATTAGACA
AACAGACAGAACACTTGACACCACACTCTCTGTAGTTTTGGCGTCCGTGG
ATCGCGAAGTTAAACGTGGCAGCACGGTGGTGGTACAGATCAACCCATGA
GGTTGAAATCGACTTTGCGGTATCACATCATGAATAATCCAGGACAGCGA
CATCACAACGACGCTCTATGCACCCTAGTCTTTGGGTATACTGCCATATT
CCGCTCCAAATTAACCTTATCTGTAGATCTGTGCGGTTCAATGTCCGCCG
TTGCTCGCGAGGGCTGTCCCCTGAACCTCAAGTCGTGTCCTTATCCACCT
CCTGTGTAGCTAGGGTGGCTAAAGGGTAATGATGAAAAACAAGGAAATAA
AAAAAAATAAAAAAATCGTACAAGCCCACAAATACTTGCAAACCGGCAAC
ACTGGTTACATACTTCGTTCTAACCTTTAGTAGTATGATGTAGAGATTTC
CTGCCCTGTATGTCGGGCAAAAATTGCGGTGTCCGCGCTGGGCTTCTCTC
TTCTCTCAAGAACGCAGACTGCAGTACGTCGTATCAGGTCGTTACTTTTC
GATATTTGGAGGGGGGAGGGGGGGGCGTCACCGCTGTTGGAACTCGTCGC
GCCCGTGCATGCATAGAGCTACGAAGTCCTCTTGACGAAAGTCCGGCAAC
TCGCTCCGGCAACGAACAGGTTCTGTTTCGTGGAGTACTCGAACGTTGAC
GAGGCGACAAAGGCTATCCGCGCCCTGCACGGACGCAAGCTGTACGGGCG
GCCGCTGCGAGTGCGCTACATGGCGGTCGAGGGGGCAAGCCGGATGGACT
ACTCTACGTCCGACAGCACCGAGCAGCGATCGTCGAGCTCTGGTGCAACA
CTCAGGTGAGAGAGGCGGGGCGGGAGTTGGAAGTGCGTCGTCGGCTTTAT
GGGGAGGGGGGGGGGGGGGGGGGGGTTCTTCTCTCTTTTGCCCTACAGAA
GACGCAGTCCATGGTTAGTGTGTATGTATAGTTTAGGAGGCTTTTTGGTT
TTTCCGTCTTGAGGTAGTACACTCGTTTGTGTTTGTGAATGTCTTTTTCA
CGCTCCATTATTGTATGTTCTATACTATTGAGAACTGTTCGTTGTTTATT
TTGGGAGATGGAGGGAGGGAGGGTGGTGGGGGGGGTGTTTAAGCCAGCCA
GCCCTTCCGCAGCTTTCTTTGCCGCGGGCTGGACCATTTTCCGTCGACAT
CCGGTAGAAAGGAAGAACACAGTCGGTCATTTGCACGAACACACGGCGAA
GACAAGGGTTTAAAAGCCTCAGACCCTAGTCAGCGTCAGGCCCTTACTGC
TACAGTAGTTTATACTTCTGCGTGCTCTTCTTTTTCAAGTATCGCACACG
ACAGTATGATATTTAGTAATATTACCCAAAAATATATACTACGAGTTTCT
TATATAAAGCAAATTTCCTTTCGTTGCTTTGCTGGTCTTGTTCCTATGTT
CAATGTATAATTATTTTATTTTTGGGGGGGGGGGGAAGTGCCGGAGGGAA
AATCCCGCCTCCGACGAGCGCTGCGGGGGAGGCCGGCATCGGAGCGGGCG
TGACGAAGCTGTCCCTTGACAAGAAGGTTAGGTTTGGCGTGTGTACAGCA
CTAGTGGTTGGAAGTCGTGCTGCAAGCACCGCCAGCTCCCGAGCTTGTCA
GTGTGTAAGAGAAGGATATAAAGAGAGAGAGCACTTAACGGTGTCCATTA
TGTTTTGCTAAAAAAAATCCGTTTGTTGCGTCGCGAATATAATGTACTTG
TATAAAGAGGGATCCTGCTTTTTGCAATATACATAGGCAAGCTCTAAAAC
ATGAGAGTCTACTTTTAAATCAGGAAGTCGGTACTGCCTTGAAAAGTTTT
TAATAGTACTAATAGTAGCCATGTGTGATGATCGGTACCCTATGAAAACA
GGGGAAAGTTTTCCTGTGTCCAAAGGGGGGGGGGCAGACAGTCATGCCCT
GCATTTCGTTTACGTTTCTAATGAGAACAAATAAAGAACAGAAACGCTTC
TCTTGTCGTATCCAGCTATCGAACTATCATATGTCTCGCATTTCAAACCC
AAGAACTTACTCATTTTGCGTCCCTTCTCTTCTTGCACATCCCCCACCCC
CTCCCCCCACCCTCCCCTCCATCTCTCTCTCTCTGAATCGTATAATATGT
ACTCTATGTACTGTATGACGGTGGGACCCAACAGGTGGCGCTGTTGAAGT
TGAAGCTGCGTGAGGCTACTGAGAAGTCCACGTAATGAACACACAAACAC
GAACATTTCCCTTGTTTGTACTTCAAGGTCCCGAGTGGGCCAAAGTCCGA
ATGGGTTAAGGGTGACTCGTGCGCTGAGTCGAGCTAGACCAGAAGGCAAT
GAAATGCACGGAGGCGTTTTTGTCGGACGAGACTGCTGCTATCCCACCCC
GTATTGGGGAGGACGGAGTACTGGCGTGTTGCCCATCTTGGAGAGAGCAC
TTCGACGTGGGGGGGGACCCCTAGGGTAGACCTCGAGAGCGGAAGGTGAC
TTCTTAAACAGTTTTACCCCCGATCGTATGGGGACCGGGAAAAGAGAAGG
TCACGTTTGTTCCGTTAAACTGAGCGAGAAGTGGCGTCTTTTGCTATTAA
TATGGGGAGTGTGCACACGAGTGTGTAGGGCACGTTTGTTCCGTTAAACT
GAGCGAGAAGTGGCGTCTTTTGCTATTAATATGGGGAGTGTGCACACGAG
TGTGTATTTTTCCGTCTCGGGCCTATGACATTGAATGAACAAAGCTAATT
GCGCTTGGGAAAGGGGGAGGGCGGAGAGTTCTGGTAGGCGTGTTTCATTA
CGTAGCCGGTCTACAACAACTCACGTACAAGTCATACTATTTTGTGTACG
AGTCCGTTTCGTTACAACGGCGGCCGGCTTCTGCTTTTACTCTCTTCTAG
GCTTCGCCTCAATATTTTTGCCGGTTTTGTTGCCACGGGAGAGTAAAAAC
GCCTCCCGTACACTTAGAACTCTTGTTCCAAAAACTAAAAACTTGCCAGG
GACGGAAAGTGACTTGCGTAGTAAGATAGATCATTGCGCTGGGCGAGGTG
G
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Coding sequence (CDS) from alignment at F-serratus_M_contig1414:156182..164632+

>mRNA_F-serratus_M_contig1414.2991.1 ID=mRNA_F-serratus_M_contig1414.2991.1|Name=mRNA_F-serratus_M_contig1414.2991.1|organism=Fucus serratus male|type=CDS|length=1638bp|location=Sequence derived from alignment at F-serratus_M_contig1414:156182..164632+ (Fucus serratus male)
GAGGTAGTGGTGAATACTGCAGAGCACGAAAGCGATGTTTCGGGACGGAC
GAGCAATCCAGCTAGCAGGAGGTAGTGGTGAATACTGCAGAGCACGAAAG
CGATGTTTCGGGACGGACGAGCAATCCAGCTAGCAGGGACGAGGAAGAAG
CTGAGCTCAGACGCAGATTGCTCGAAAAGGTGCATCGGGATAGGGACGAG
GAAGAAGCTGAGCTCAGACGCAGATTGCTCGAAAAGGTGCATCGGGATAG
GAACGATGCTGCCGATCTTAAAAGCGGTATATCGGGTACATCTAGATCGT
CGGAGTTATCGACAGCTGACCTTCCCCCGGCAAAATCGCGCAAGACCGGA
GTCGAAGATATCGACGACGAGGATGCATCCAAGTTGTCGTCAGCGGGTGT
TCCATCCGAGACGCCTAAGGCGACGGGGGCAGGGGCAGCAGGGACTGGCG
AGTCCTTGCCGGACGTGGAGGGCATCCCGAACGAGACGCTCTTCGTTGGG
AACCTCAGCTACAGGAACGATGCTGCCGATCTTAAAAGCGGTATATCGGG
TACATCTAGATCGTCGGAGTTATCGACAGCTGACCTTCCCCCGGCAAAAT
CGCGCAAGACCGGAGTCGAAGATATCGACGACGAGGATGCATCCAAGTTG
TCGTCAGCGGGTGTTCCATCCGAGACGCCTAAGGCGACGGGGGCAGGGGC
AGCAGGGACTGGCGAGTCCTTGCCGGACGTGGAGGGCATCCCGAACGAGA
CGCTCTTCGTTGGGAACCTCAGCTACAGAGTGTCCGAAGCGGTCATCATC
AAACTCTTCACGCCCTTTGGCAAGGTGGTTCGAGAACAGTTCTGCTATCA
CCATGTCGGCCCACGGCGCGGGGAGCCTCGGGGAGTGTCCGAAGCGGTCA
TCATCAAACTCTTCACGCCCTTTGGCAAGGTGGTTCGAGAACAGTTCTGC
TATCACCATGTCGGCCCACGGCGCGGGGAGCCTCGGGGGTTCTGTTTCGT
GGAGTACTCGAACGTTGACGAGGCGACAAAGGCTATCCGCGCCCTGCACG
GACGCAAGCTGTACGGGCGGCCGCTGCGAGTGCGCTACATGGCGGTCGAG
GGGGCAAGCCGGATGGACTACTCTACGTCCGACAGCACCGAGCAGCGATC
GTCGAGCTCTGGTGCAACACTCAGGTTCTGTTTCGTGGAGTACTCGAACG
TTGACGAGGCGACAAAGGCTATCCGCGCCCTGCACGGACGCAAGCTGTAC
GGGCGGCCGCTGCGAGTGCGCTACATGGCGGTCGAGGGGGCAAGCCGGAT
GGACTACTCTACGTCCGACAGCACCGAGCAGCGATCGTCGAGCTCTGGTG
CAACACTCAGTGCCGGAGGGAAAATCCCGCCTCCGACGAGCGCTGCGGGG
GAGGCCGGCATCGGAGCGGGCGTGACGAAGCTGTCCCTTGACAAGAAGTG
CCGGAGGGAAAATCCCGCCTCCGACGAGCGCTGCGGGGGAGGCCGGCATC
GGAGCGGGCGTGACGAAGCTGTCCCTTGACAAGAAGGTGGCGCTGTTGAA
GTTGAAGCTGCGTGAGGCTACTGAGAAGTCCACGTAAGTGGCGCTGTTGA
AGTTGAAGCTGCGTGAGGCTACTGAGAAGTCCACGTAA
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