prot_F-serratus_M_contig1412.2988.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_F-serratus_M_contig1412.2988.1
Unique Name	prot_F-serratus_M_contig1412.2988.1
Type	polypeptide
Organism	Fucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length	161

Homology

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BLAST of mRNA_F-serratus_M_contig1412.2988.1 vs. uniprot
Match: D7G0W8_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G0W8_ECTSI)

HSP 1 Score: 175 bits (443), Expect = 2.690e-52
Identity = 81/144 (56.25%), Postives = 111/144 (77.08%), Query Frame = 0

Query:   18 FTRLVVKRILSVVTIIAM-VALAIFYGQSDGPKLAKRNAALAPGDRLKGGEYISFCTSIIATECKPKYLLLSRDGSLGMYEGSRPHARTTKLWSASVNFKGNA--QSVYELAYTGDNIILHEDGKVKWASPVTALPKNLQPWPF 158
            F++ +  ++ +V++++A+ VA A+F+G+ DGPKL KR+A L PGDRLKGG+YISFCTSIIAT CKPKY  L RDGSLG+Y G  P+A+  KLW+A    KG    ++ YEL YTGD ++L++DGKVKW+S V +LPKN++PWP 
Sbjct:   87 FSQSLPAKLSAVLSVVAIAVAAALFFGEGDGPKLVKRDAPLFPGDRLKGGQYISFCTSIIATGCKPKYFELGRDGSLGVYGGKSPYAQKAKLWTAGTGAKGGGGKEAFYELVYTGDRVVLNKDGKVKWSSSVKSLPKNMRPWPL 230

The following BLAST results are available for this feature:

BLAST of mRNA_F-serratus_M_contig1412.2988.1 vs. uniprot

BLAST of mRNA_F-serratus_M_contig1412.2988.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
D7G0W8_ECTSI	2.690e-52	56.25	Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 21..43
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 1..20
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 44..160
None	No IPR available	TMHMM	TMhelix		coord: 21..43

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
F-serratus_M_contig1412	contig	F-serratus_M_contig1412:170227..176006 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Fucus serratus MALE	2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90	2022-09-16
OGS1.0 of Fucus serratus male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_F-serratus_M_contig1412.2988.1	mRNA_F-serratus_M_contig1412.2988.1	Fucus serratus male	mRNA	F-serratus_M_contig1412 169472..177557 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_F-serratus_M_contig1412.2988.1 ID=prot_F-serratus_M_contig1412.2988.1|Name=mRNA_F-serratus_M_contig1412.2988.1|organism=Fucus serratus male|type=polypeptide|length=161bp
MRCPPWLSQRGFEFKDCFTRLVVKRILSVVTIIAMVALAIFYGQSDGPKL
AKRNAALAPGDRLKGGEYISFCTSIIATECKPKYLLLSRDGSLGMYEGSR
PHARTTKLWSASVNFKGNAQSVYELAYTGDNIILHEDGKVKWASPVTALP
KNLQPWPFRP*