mRNA_F-serratus_M_contig1411.2984.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig1411.2984.1 vs. uniprot
Match: D8LE51_ECTSI (SEN1 protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LE51_ECTSI) HSP 1 Score: 214 bits (544), Expect = 6.870e-58 Identity = 105/150 (70.00%), Postives = 121/150 (80.67%), Query Frame = 1
Query: 19 SLSNSAEVEYIIFLLRDLVRSFPEMNFNGRVGVIAPYRNQITALQREMWKTGLRQDGVEVSTVDGFQGREKDIIILSCVRSPEEGSAPNCNKSSD--IGFLSDWRRLNVAITRAKHSMWIVGHAGVLRMNHDWRELIDDSKRRGAFLEQS 462
SLSN EV YI LL+DL+ +FP +FNGR+GVIAPYRNQI ALQR MW TGLR DGVEVSTVDGFQGREKDI+I SCVR+PE + + SS IGFL DWRRLNVAITRAK +MWIVGHAGVL+ + DWRELI+DSK+R AF++ S
Sbjct: 911 SLSNPTEVSYITSLLQDLITTFPGTDFNGRIGVIAPYRNQIRALQRGMWSTGLRHDGVEVSTVDGFQGREKDIMIFSCVRAPELQRSGDSGSSSGGGIGFLDDWRRLNVAITRAKFAMWIVGHAGVLKQSTDWRELINDSKKRNAFIDSS 1060
BLAST of mRNA_F-serratus_M_contig1411.2984.1 vs. uniprot
Match: A0A6H5JS06_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JS06_9PHAE) HSP 1 Score: 214 bits (544), Expect = 7.040e-58 Identity = 111/184 (60.33%), Postives = 132/184 (71.74%), Query Frame = 1
Query: 19 SLSNSAEVEYIIFLLRDLVRSFPEMNFNGRVGVIAPYRNQITALQREMWKTGLRQDGVEVSTVDGFQGREKDIIILSCVRSPEEGSAPNCNKSSD--IGFLSDWRRLNVAITRAKHSMWIVGHAGVLRMNHDWRELIDDSKRRGAFLEQSEAAYRNPIGALRARPHERAGGRHDRDNSSRAANG 564
SLSN EV YI LL DL+ +FP +FNG++GVIAPYRNQI ALQR MW TGLR DGVEVSTVDGFQGREKDI+I SCVR+PE + + SS +GFL DWRRLNVAITRAK +MWIVGHAGVL+ + DWRELI+DSK+R AF++ S P + GR+ N+SR +NG
Sbjct: 1102 SLSNPTEVSYITSLLHDLITTFPGTDFNGKIGVIAPYRNQIRALQRGMWSTGLRHDGVEVSTVDGFQGREKDIMIFSCVRAPELQRSGDSGSSSGGGVGFLDDWRRLNVAITRAKFAMWIVGHAGVLKQSTDWRELINDSKKRDAFIDSSN-------------PGATSSGRNSGSNTSRGSNG 1272
BLAST of mRNA_F-serratus_M_contig1411.2984.1 vs. uniprot
Match: A0A1V9YWE5_9STRA (AAA_12 domain-containing protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9YWE5_9STRA) HSP 1 Score: 129 bits (324), Expect = 6.190e-32 Identity = 68/148 (45.95%), Postives = 94/148 (63.51%), Query Frame = 1
Query: 7 ESTTSLSNSAEVEYIIFLLRDLVRSFPEMNFNGRVGVIAPYRNQITALQREMWKTGLRQDGVEVSTVDGFQGREKDIIILSCVRSPEEGSAPNCNKSSDIGFLSDWRRLNVAITRAKHSMWIVGHAGVLRMNHDWRELIDDSKRRGAF 450
E +TS N EV++I+ L+ LV+SFP NF GR+G+I+PY++QI L + RQ VEV+TVDGFQGREK+III+SCVR+ + + F D RR+NVA+TRA S W+VG++ +L N W LI+D K R +
Sbjct: 71 EGSTSYRNLHEVDFIVNLVTKLVQSFPNYNFRGRIGIISPYKSQIHELSTAFTRLNYRQH-VEVNTVDGFQGREKEIIIVSCVRTV---------RGRENTFWGDVRRMNVALTRAISSCWVVGNSALLGQNTTWYTLIEDCKARDCY 208
BLAST of mRNA_F-serratus_M_contig1411.2984.1 vs. uniprot
Match: UPI00192E8A64 (uncharacterized protein LOC104450703 isoform X1 n=2 Tax=Eucalyptus grandis TaxID=71139 RepID=UPI00192E8A64) HSP 1 Score: 134 bits (336), Expect = 2.200e-30 Identity = 68/153 (44.44%), Postives = 97/153 (63.40%), Query Frame = 1
Query: 1 GDESTTSLSNSAEVEYIIFLLRDLVRSFPEMNFNGRVGVIAPYRNQITALQREMWKT--GLRQDGVEVSTVDGFQGREKDIIILSCVRSPEEGSAPNCNKSSDIGFLSDWRRLNVAITRAKHSMWIVGHAGVLRMNHDWRELIDDSKRRGAFL 453
G+ SL N EV+ I LLR +P GR+G+I PY+ Q++ L+ + T G+E +TVDGFQGRE DI+ILS VR+ + GSA + SS IGF++D RR+NVA+TRAK S+WI+G++ L+ N W L++D+K R F+
Sbjct: 1912 GNSGALSLCNEREVDAAIELLRFFKMRYPSEFIGGRIGIITPYKRQLSLLRSRFYSTFGSSAAAGMEFNTVDGFQGREVDILILSTVRAAKPGSAMSGVSSSTIGFVADVRRMNVALTRAKLSLWILGNSRTLKTNRSWAALLEDAKARSLFV 2064
BLAST of mRNA_F-serratus_M_contig1411.2984.1 vs. uniprot
Match: A0A1E3PY24_LIPST (Uncharacterized protein n=1 Tax=Lipomyces starkeyi NRRL Y-11557 TaxID=675824 RepID=A0A1E3PY24_LIPST) HSP 1 Score: 133 bits (334), Expect = 3.920e-30 Identity = 68/150 (45.33%), Postives = 99/150 (66.00%), Query Frame = 1
Query: 7 ESTTSLSNSAEVEYIIFLLRDLVRSFPEMNFNGRVGVIAPYRNQITALQRE----MWKTGLRQDGVEVSTVDGFQGREKDIIILSCVRSPEEGSAPNCNKSSDIGFLSDWRRLNVAITRAKHSMWIVGHAGVLRMNHDWRELIDDSKRRG 444
+ST S N E + L R L SFP+++ GRVG++ PY+ Q+ L+ + TG+ G++ +T+DGFQG+EKDIIILSCVR+ G A K +GFL+D RR+NVA+TRAK S+WI+G+ L +N WR+LI+D+++RG
Sbjct: 1810 KSTHSYYNKMEALCAVALYRQLTESFPKLDLEGRVGIVTPYKQQLHELRNTFRSALGNTGMH--GIDFNTIDGFQGQEKDIIILSCVRAQAAGGAGGSVKG--VGFLADIRRMNVALTRAKSSLWIIGNMQSLVVNDVWRKLIEDAQKRG 1955
BLAST of mRNA_F-serratus_M_contig1411.2984.1 vs. uniprot
Match: A0A6A3M5L9_9STRA (Uncharacterized protein n=7 Tax=Phytophthora TaxID=4783 RepID=A0A6A3M5L9_9STRA) HSP 1 Score: 132 bits (332), Expect = 6.880e-30 Identity = 73/160 (45.62%), Postives = 101/160 (63.12%), Query Frame = 1
Query: 13 TTSLSNSAEVEYIIFLLRDLVRSFPEMNFNGRVGVIAPYRNQITALQREMWKTGLRQD---GVEVSTVDGFQGREKDIIILSCVRSPEEGSAPNCNKS-----SDI--GFLSDWRRLNVAITRAKHSMWIVGHAGVLRMNHDWRELIDDSKRRGAFLEQS 462
+TSL N +EVE ++ LLR L++ FP + + R+GVIAPY+ QI ++ + K D G+EV+TVDGFQGREK+III SCVR+ G KS D+ F +D RR+NVAITRAK S+WIVG++ +L+ + WR LI +K F+ S
Sbjct: 1461 STSLRNMSEVETVVQLLRRLLKKFPHIEWKKRIGVIAPYKQQIYEVRGAIGKLESEFDRPLGIEVNTVDGFQGREKEIIIYSCVRTSHGGRRKKKRKSHGNDEEDVLDAFWADERRMNVAITRAKSSLWIVGNSNLLKQSRAWRALIKHTKDHNRFIADS 1620
BLAST of mRNA_F-serratus_M_contig1411.2984.1 vs. uniprot
Match: U4L0J1_PYROM (Similar to Uncharacterized ATP-dependent helicase C29A10.10c acc. no. O94387 n=1 Tax=Pyronema omphalodes (strain CBS 100304) TaxID=1076935 RepID=U4L0J1_PYROM) HSP 1 Score: 132 bits (331), Expect = 9.680e-30 Identity = 69/155 (44.52%), Postives = 98/155 (63.23%), Query Frame = 1
Query: 16 TSLSNSAEVEYIIFLLRDLVRSFPEMNFNGRVGVIAPYRNQITALQREMW-KTGLR-QDGVEVSTVDGFQGREKDIIILSCVRSPEEGSAPNCNKSSDIGFLSDWRRLNVAITRAKHSMWIVGHAGVLRMNHDWRELIDDSKRRGAFLEQSEAAY 474
TSL N E + L + F E+NF+G++G++ PYR Q++ L+R K G + GVE +TVD FQGRE+DI+I SCVR+ +EG IGFL+D RR+NV +TRAK S++I+G++ L +H W+ LIDD+K R AF E S +
Sbjct: 1614 TSLVNPDEARAALALFNRITTDFHEVNFDGKIGIVTPYRQQLSELRRVFQNKYGEKILTGVEFNTVDAFQGRERDIMIFSCVRAAQEGG---------IGFLADVRRMNVGLTRAKSSLFILGNSNFLIRSHMWKRLIDDAKERNAFTENSRGIF 1759
BLAST of mRNA_F-serratus_M_contig1411.2984.1 vs. uniprot
Match: A0A5J5ERJ9_9PEZI (SEN1 N terminal-domain-containing protein n=1 Tax=Sphaerosporella brunnea TaxID=1250544 RepID=A0A5J5ERJ9_9PEZI) HSP 1 Score: 131 bits (330), Expect = 1.300e-29 Identity = 69/162 (42.59%), Postives = 98/162 (60.49%), Query Frame = 1
Query: 1 GDEST--TSLSNSAEVEYIIFLLRDLVRSFPEMNFNGRVGVIAPYRNQITALQREMWKTGLRQ--DGVEVSTVDGFQGREKDIIILSCVRSPEEGSAPNCNKSSDIGFLSDWRRLNVAITRAKHSMWIVGHAGVLRMNHDWRELIDDSKRRGAFLEQSEAAY 474
G ES TSL N E + L + FPE+NF+GR+G++ PYR Q+ L+R + + GVE +TVD FQGRE+DIII SCVR+ EEG +GFLSD RR+NV +TR+K S++I+G++ L NH W+ LI+D++ R F + +
Sbjct: 1594 GSESRQKTSLINQEEARTALALFSRITNDFPEINFDGRIGIVTPYRQQLGELKRTFQQRYGEKIFTGVEFNTVDAFQGRERDIIIFSCVRAAEEGG---------VGFLSDIRRMNVGLTRSKSSLFILGNSNFLVRNHMWKRLIEDAQARNMFTQNVHGLF 1746
BLAST of mRNA_F-serratus_M_contig1411.2984.1 vs. uniprot
Match: UPI000D1CB6B0 (probable helicase MAGATAMA 3 n=1 Tax=Selaginella moellendorffii TaxID=88036 RepID=UPI000D1CB6B0) HSP 1 Score: 128 bits (321), Expect = 1.460e-29 Identity = 72/164 (43.90%), Postives = 97/164 (59.15%), Query Frame = 1
Query: 10 STTSLSNSAEVEYIIFLLRDLVRSFPEMNFNGRVGVIAPYRNQITALQREMWKTGLRQDGVEVSTVDGFQGREKDIIILSCVRSPEEGSAPNCNKSSDIGFLSDWRRLNVAITRAKHSMWIVGHAGVLRMNHDWRELIDDSKRRGAFLEQSEAAYRNPIGALRA 501
S SL+N E E+I LLR L +PE GR+GVI PY+ Q LQ M G++V+TVD FQGRE DII+LS VR+ S + +GFL+D RR+NVA+TRAK S+W+VG+A L N DW+ L+ D +RRG + Y + I L++
Sbjct: 270 SMQSLTNPDEAEFIFQLLRVLKERYPEEVRPGRIGVITPYQEQRKVLQENMRSL---HSGIDVNTVDSFQGREADIIVLSTVRASFGES------QAGVGFLADVRRMNVALTRAKFSLWVVGNARTLERNSDWKALLQDCRRRG-LVSSVRKPYHSAINGLQS 423
BLAST of mRNA_F-serratus_M_contig1411.2984.1 vs. uniprot
Match: A0A8J5V8L5_ZIZPA (Uncharacterized protein n=2 Tax=Zizania palustris TaxID=103762 RepID=A0A8J5V8L5_ZIZPA) HSP 1 Score: 130 bits (328), Expect = 1.530e-29 Identity = 64/144 (44.44%), Postives = 92/144 (63.89%), Query Frame = 1
Query: 28 NSAEVEYIIFLLRDLVRSFPEMNFNGRVGVIAPYRNQITALQREMWKTGLRQ--DGVEVSTVDGFQGREKDIIILSCVRSPEEGSAPNCNKSSDIGFLSDWRRLNVAITRAKHSMWIVGHAGVLRMNHDWRELIDDSKRRGAFL 453
N EV +I L L R +PE+ + +V VI+PYR+Q+ L+ + W T Q + ++V+TVDGFQGREK+I+I SCVR CNK IGF+SD+RR+NVAITRA+ S+ +VG A L+ + W L++ +K RG +
Sbjct: 571 NKHEVVFITLLYHQLARYYPELKSSSQVAVISPYRHQVKLLKDQFWSTFGEQSKEVIDVNTVDGFQGREKEIVIFSCVR---------CNKGQKIGFVSDFRRMNVAITRARSSVLVVGSASTLKEDKHWNNLVESAKERGRYF 705 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1411.2984.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig1411.2984.1 >prot_F-serratus_M_contig1411.2984.1 ID=prot_F-serratus_M_contig1411.2984.1|Name=mRNA_F-serratus_M_contig1411.2984.1|organism=Fucus serratus male|type=polypeptide|length=244bp MNFNGRVGVIAPYRNQITALQREMWKTGLRQDGVEVSTVDGFQGREKDIIback to top mRNA from alignment at F-serratus_M_contig1411:150362..152315+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig1411.2984.1 ID=mRNA_F-serratus_M_contig1411.2984.1|Name=mRNA_F-serratus_M_contig1411.2984.1|organism=Fucus serratus male|type=mRNA|length=1954bp|location=Sequence derived from alignment at F-serratus_M_contig1411:150362..152315+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig1411:150362..152315+ >mRNA_F-serratus_M_contig1411.2984.1 ID=mRNA_F-serratus_M_contig1411.2984.1|Name=mRNA_F-serratus_M_contig1411.2984.1|organism=Fucus serratus male|type=CDS|length=1464bp|location=Sequence derived from alignment at F-serratus_M_contig1411:150362..152315+ (Fucus serratus male)back to top |