mRNA_F-serratus_M_contig141.2965.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig141.2965.1 vs. uniprot
Match: A0A6H5JBL8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBL8_9PHAE) HSP 1 Score: 224 bits (571), Expect = 2.880e-55 Identity = 142/292 (48.63%), Postives = 173/292 (59.25%), Query Frame = 2
Query: 143 FHVCPFVLRQRMDKGKEEDRA-------VYRYVFACPGEAEVLAQAATGVCYFNMRVVRSNGESVVQRSYNATAVRVIRLNASGGASLPEPPRAPAASPGGAARAEGGHASTIALPGGDPADAPVVLEDSVEVGSGTEVMTKDGKVKVVPAVESREGNLCVEMRIRLYKYGAMSKLLDRLPKDSANATVQLQGPFLVDSLRPCPAHRNVIMIAAGTGINPMIQFIRDYQSFESQDALRTTGRSRIALLHQVTSVSDLYCDKELRVLEARGRGLLEITTLVSGNHRKTNNPRA 997
FHVCP + R+RM R VYRY+F CPG+A+VL TGVCYFNMR + G+ V+QRSYNA AVRV N P P A GG L GG L + G+GT +KVVPA ++ EG LC+EMRIRLY GAMSKLL+RL KD+ N VQLQGPF++ L P PAHRNV+MIAAGTGINPM+Q IRDY + A + RSR+AL+ Q TS +DLY +E+ L+A+ GLLE+T L+SG HRK N P A
Sbjct: 1408 FHVCPLLFRERMGATSAVGRGNLPTTRPVYRYIFLCPGQAQVLN--ITGVCYFNMRA-QEKGKGVIQRSYNAYAVRVRDTN-------PTP-------------AVGGM-----LMGG--------LSHGGDKGAGT--------LKVVPASQTTEGVLCIEMRIRLYHDGAMSKLLERLAKDTDNPAVQLQGPFVIQKLVPPPAHRNVVMIAAGTGINPMVQQIRDYLALPRVAA--QSSRSRLALVWQATSEADLYGSEEMTELQAKSNGLLEVTVLISGEHRKRNIPGA 1653
BLAST of mRNA_F-serratus_M_contig141.2965.1 vs. uniprot
Match: D7FX04_ECTSI (Dopamine beta-monooxygenase, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FX04_ECTSI) HSP 1 Score: 223 bits (567), Expect = 3.070e-55 Identity = 142/299 (47.49%), Postives = 172/299 (57.53%), Query Frame = 2
Query: 143 FHVCPFVLRQRMDKGKEEDRA-------VYRYVFACPGEAEVLAQAATGVCYFNMRVVRSNGESVVQRSYNATAVRVIRLNASGGASLPEPPRAPAASPGGAARAEGGHASTIALPGGDPADAPVVLEDSVEVGSGTEVMTKDGKVKVVPAVESREGNLCVEMRIRLYKYGAMSKLLDRLPKDSANATVQLQGPFLVDSLRPCPAHRNVIMIAAGTGINPMIQFIRDYQSFESQDALRTTGRSRIALLHQVTSVSDLYCDKEL-------RVLEARGRGLLEITTLVSGNHRKTNNPRA 997
FHVCP + R+RM R VYRY+F CPG+A+VL Q TGVCYFNMR + G V+QRSYNA AVRV N P P GG L GG L + G+GT + VVPA ++ EG LC+EMRIRLY GAMSKLL+RL KD+ N VQLQGPF++ L P PAHRNV+MIAAGTGINPM+Q IRDY + A + RSR+AL+ Q TS +DLY +E+ R+ EA+ GLLE+T L+SG HRK N P A
Sbjct: 716 FHVCPLLFRERMGATSAVGRGNLPTTRPVYRYIFLCPGQAQVLPQNITGVCYFNMRA-QEKGNGVIQRSYNAYAVRVRDTN-------PTP-------------TAGGM-----LMGG--------LSHGSDKGAGTLI--------VVPASQTTEGVLCIEMRIRLYHDGAMSKLLERLAKDTDNPAVQLQGPFVIQKLVPPPAHRNVVMIAAGTGINPMVQQIRDYLALPRVAA--QSSRSRLALVWQATSEADLYGSEEMTELQYDRRLCEAKSNGLLEVTVLISGEHRKRNIPGA 970
BLAST of mRNA_F-serratus_M_contig141.2965.1 vs. uniprot
Match: D7FQW8_ECTSI (Peroxidase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQW8_ECTSI) HSP 1 Score: 195 bits (496), Expect = 1.200e-46 Identity = 145/412 (35.19%), Postives = 203/412 (49.27%), Query Frame = 2
Query: 8 KAKRRGSVNAVPMNP--------VQTSLVPVAAAAFLENIQKRKERRRFVFRQFHVCPFVLRQRMDKGKEEDRAV-------YRYVFACPGEAEVLAQAATGVCYFNMRVVRSNGESVVQRSYNATAVRVIRLNASGGASLPEPPRAPAASPGGAARAEGGHASTIALPGGDPADAPVVLEDSVEVGSGTEVMTKDGKVKVVPAVESREGNLCVEMRIRLYKYGAMSKLLDRLPKDSANATVQLQGPFLVDSLRPCPAHRNVIMIAAGTGINPMIQFIRDYQSFESQDALRTTGRSRIALLHQVTSVSDLYCDKELRVLEARGRGLLEITTLVSGNHRKTNNPRAPNTFQRRREKRADAAGAKKAAAALAREAADRSDPSES----PVGIFNRLFTRSPAASRDNATDGGAV 1186
KA + + VP P V T VPV + KR + + ++FHVCP + R++M R + YRY+F+CPG+A+ L + GVC+F+M + G+ V+QR+YNA AVRV + G D GSG +VVPA E+ EG LC+EMRIRLY GAMS+LL++L KD+ N +QLQGPF++ L P PAHRNV+MIAAGTG+NPM+Q IRDY + A T RSR+ L+ Q S ++LY +E+ ++A+ +GLLE+ LVSG+ R+ N P A F+R G K + A+A + S PS S P G +++ SP D G +
Sbjct: 876 KAAKANELAVVPDGPSAPSAGAGVTTFGVPVVSPGAGPAALKRTWSSKKLLQRFHVCPLLFREKMGTDSPIGRGLLFTKRPTYRYIFSCPGQAQALVETIHGVCHFHMPG-QVPGKGVIQRAYNAYAVRVQGF----------------------------------VDGKD--------------GSGKGATPP----RVVPAQETSEGVLCIEMRIRLYHDGAMSQLLEKLSKDTDNPAIQLQGPFIITKLVPPPAHRNVVMIAAGTGVNPMVQQIRDYLALPRDQAHST--RSRLCLIWQSMSEAELYGSEEITEMQAKSKGLLEVIVLVSGDQRRRNVPGA--AFRR---------GKKMMSKAMAMVSPVSSSPSSSVIAMPAGRPPKVYDMSPNRPDDEERSSGGI 1221
BLAST of mRNA_F-serratus_M_contig141.2965.1 vs. uniprot
Match: D8LFE6_ECTSI (Peroxidase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFE6_ECTSI) HSP 1 Score: 189 bits (480), Expect = 1.420e-44 Identity = 122/292 (41.78%), Postives = 154/292 (52.74%), Query Frame = 2
Query: 143 FHVCPFVLRQRMDKGKE-------EDRAVYRYVFACPGEAEVLAQAATGVCYFNMRVVRSNGESVVQRSYNATAVRVIRLNASGGASLPEPPRAPAASPGGAARAEGGHASTIALPGGDPADAPVVLEDSVEVGSGTEVMTKDGKVKVVPAVESREGNLCVEMRIRLYKYGAMSKLLDRLPKDSANATVQLQGPFLVDSLRPCPAHRNVIMIAAGTGINPMIQFIRDYQSFESQDALRTTGRSRIALLHQVTSVSDLYCDKELRVLEARGRGLLEITTLVSGNHRKTNNPRA 997
FHVCP + R+RM R VYRY+F CPG+A++L VVQRSYNA AVRV N G + A+ GG L + G GT +KVVPA E++ G LC+EMRIRLY GAMSKLL+ L KDS N TV+LQ PF++ L P PAHRNV+MIAAGTGINPM+Q IRDY + A + +SR+AL+ Q TS +DL+ E+ ++ + GLLE+ L+SG HRK N P A
Sbjct: 1187 FHVCPLLFRERMGAVSSFGRGYLPTSRPVYRYIFLCPGQAQILG--------------------VVQRSYNAYAVRVQDTN--------------------------GSLTPGAIMGG--------LSQGSDKGQGT--------LKVVPAGETKAGVLCIEMRIRLYTDGAMSKLLENLAKDSDNPTVRLQAPFVIQKLVPPPAHRNVMMIAAGTGINPMVQQIRDYLALPKSGA--QSSKSRLALVWQATSEADLFGADEIAAMQEKSDGLLEVVMLISGQHRKRNIPGA 1414
BLAST of mRNA_F-serratus_M_contig141.2965.1 vs. uniprot
Match: D7G7J2_ECTSI (Peroxidase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7J2_ECTSI) HSP 1 Score: 162 bits (409), Expect = 3.160e-36 Identity = 100/220 (45.45%), Postives = 121/220 (55.00%), Query Frame = 2
Query: 143 FHVCPFVLRQRMDKGKE-------EDRAVYRYVFACPGEAEVLAQAATGVCYFNMRVVRSNGESVVQRSYNATAVRVIRLNASGGASLPEPPRAPAASPGGAARAEGGHASTIALPGGDPADAPVVLEDSVEVGSGTEVMTKDGKVKVVPAVESREGNLCVEMRIRLYKYGAMSKLLDRLPKDSANATVQLQGPFLVDSLRPCPAHRNVIMIAAGTGINP 781
F VCP + R+RM R VYRY+F+CP +A+ AQA +GVCYFNMR + G+ VVQR YNA AVR++ + EPP PGG A + T KVVPA E+ EG LC+EMRIR+Y GAMSKLL++L KD+ N VQLQGPFLV+ L P PAHRNVIMIAAGTG+NP
Sbjct: 1091 FQVCPLLFRERMGAASAVGRGHLPSKRPVYRYIFSCPAKAQAQAQAVSGVCYFNMRA-QEEGKGVVQRPYNAFAVRLLDV---------EPP----------------------TPGGRVAWSK----------------TSAKLPKVVPAEETTEGVLCIEMRIRMYHDGAMSKLLEKLSKDTDNVAVQLQGPFLVNKLAPPPAHRNVIMIAAGTGVNP 1262
BLAST of mRNA_F-serratus_M_contig141.2965.1 vs. uniprot
Match: D7G7J1_ECTSI (Peroxidase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7J1_ECTSI) HSP 1 Score: 159 bits (402), Expect = 2.110e-35 Identity = 98/224 (43.75%), Postives = 125/224 (55.80%), Query Frame = 2
Query: 131 VFRQFHVCPFVLRQRMDKGKE-------EDRAVYRYVFACPGEAEVLAQAATGVCYFNMRVVRSNGESVVQRSYNATAVRVIRLNASGGASLPEPPRAPAASPGGAARAEGGHASTIALPGGDPADAPVVLEDSVEVGSGTEVMTKDGKVKVVPAVESREGNLCVEMRIRLYKYGAMSKLLDRLPKDSANATVQLQGPFLVDSLRPCPAHRNVIMIAAGTGINP 781
+F +F VCP + R+RM R VYRY+F+CP + AQA +GVCYFNMR + G+ VVQR+YNA AVR++ + EPP +PGG G A LP K+VPA E+ EG LC+EMRIR+Y GAMSKLL++L +D+ NA VQLQGPFL++ L P P +RNVIMIAAGTG+NP
Sbjct: 1093 LFERFQVCPLLFRERMGAASAVGRGHLPSKRPVYRYIFSCPANGQAQAQAVSGVCYFNMRA-QEEGKGVVQRAYNAFAVRLLDV---------EPP-----TPGGRVAWTKGFAK---LP------------------------------KIVPAGETTEGILCIEMRIRMYHDGAMSKLLEKLSQDTDNAAVQLQGPFLINKLAPPPVYRNVIMIAAGTGVNP 1268
BLAST of mRNA_F-serratus_M_contig141.2965.1 vs. uniprot
Match: A0A6H5KC42_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KC42_9PHAE) HSP 1 Score: 132 bits (332), Expect = 2.360e-27 Identity = 111/375 (29.60%), Postives = 143/375 (38.13%), Query Frame = 2
Query: 107 KRKERRRFVFRQFHVCPFVLRQRMDKGKEEDRAVYRYVFACPGEAEVLAQAATGVCYFNMRVVRSNGESVVQRSYNATAVRVIRLNASGGASLPEPPRAPAASPGGAARAEGGHASTIALPGGDPADAPVVLEDSVEVGSGTEVMTKDGKVKVVPAVESREGNLCVEMRIRLYKYGAMSKLLDRLPK--------------------------------------------------------------------------------DSANATVQLQGPFLVDSLRPCPAHRNVIMIAAGTGINPMIQFIRDYQSFESQDALRTTGRSRIALLHQVTSVSDLYCDKELRVLEARGRGLLEITTLVSGNHRKTNNP 991
+R R R FHVCP +L +++ G R V+++VFACPG A L + GVC+F MR+ + G +VV+R+YNA AVRV+ ++GK +VVPA+ES EG LCVEMRIRLY G MS LL RL K + N VQLQGPFL L P PAHRNV+MIAAGTG+NP + S E+ DLYC EL L+A+ GLLE+T L+SG++ + N P
Sbjct: 393 RRVARTRNPLHLFHVCPLLLHEKLCDGG--GRPVHKFVFACPGTAAALVGSMEGVCHFKMRLTQEAGMTVVERAYNAFAVRVL--------------------------------------------------------------DEEGKRRVVPALESSEGVLCVEMRIRLYPDGLMSGLLARLIKVVPTVAITGHCSTHKNHKLFISASNKLSRSPIGDRPTNRSTDGSTYALDRLFWEERSIRVSPTIRAPCSCCGWVRGGGHQNLDNPAVQLQGPFLQHRLTPPPAHRNVVMIAAGTGVNPS-----ECNSVEA----------------------DLYCTDELTALQAKANGLLEVTALISGDNTRRNVP 676
BLAST of mRNA_F-serratus_M_contig141.2965.1 vs. uniprot
Match: A0A6H5JX59_9PHAE (Cytochrome b5 heme-binding domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JX59_9PHAE) HSP 1 Score: 104 bits (260), Expect = 1.040e-18 Identity = 89/305 (29.18%), Postives = 112/305 (36.72%), Query Frame = 2
Query: 107 KRKERRRFVFRQFHVCPFVLRQRMDKGKEEDRAVYRYVFACPGEAEVLAQAATGVCYFNMRVVRSNGESVVQRSYNATAVRVIRLNASGGASLPEPPRAPAASPGGAARAEGGHASTIALPGGDPADAPVVLEDSVEVGSGTEVMTKDGKVKVVPAVESREGNLCVEMRIRLYKYGAMSKLLDRLPK--------------------------------------------------------------------------------DSANATVQLQGPFLVDSLRPCPAHRNVIMIAAGTGINP 781
+R R R FHVCP +L +++ G R V+++VFAC G AE L + GVC+F MR+ + G VV+R+YNA AVRV+ ++GK +VVPA+ES EG LCVEMR RLY G MS LL +L K + N VQLQGPFL L P PAHRNV+MIAAGTG+NP
Sbjct: 572 RRVARTRNPLHLFHVCPLLLHEKLCDGG--GRPVHKFVFACLGTAEALVGSMEGVCHFKMRLAQEAGMIVVERAYNAFAVRVL--------------------------------------------------------------DEEGKRRVVPALESSEGVLCVEMRARLYPDGLMSGLLAQLVKVVPTVAIFCHSSTHKHHHMFISVSNKLSQSPTGDRPTNGSTDGSTYAFDRLFWEERSIRETPTIRAPCSFCGWVRGGGHQNLDNPAVQLQGPFLQHRLTPPPAHRNVVMIAAGTGVNP 812
BLAST of mRNA_F-serratus_M_contig141.2965.1 vs. uniprot
Match: D8LB74_ECTSI (Delta-9 desaturase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LB74_ECTSI) HSP 1 Score: 92.4 bits (228), Expect = 5.710e-15 Identity = 70/223 (31.39%), Postives = 94/223 (42.15%), Query Frame = 2
Query: 101 IQKRKERRRFVFRQFHVCPFVLRQRMDKGKEEDRAVYRYVFACPGEAEVLAQAATGVCYFNMRVVRSNG---------------ESVVQRSYNATAVRVIRLNASGGASLPEPPRAPAASPGGAARAEGGHASTIALPGGDPADAPVVLEDSVEVGSGTEVMTKDGKVKVVPAVESREGNLCVEMRIRLYKYGAMSKLLDRLPKDSANATVQLQGPFLVDSLR 724
I +R R R FHVCP +L +++ G R V+++VFACPG A L + GVC+FNMR+ + G ++VVQR+YNA AVRV+ ++GK +VVP++ES EG LCVEMRIRLY G MS LL L K AN +++ D R
Sbjct: 647 IPRRVARTRNPLHSFHVCPLLLHEKLCDGG--GRPVHKFVFACPGTAAALVGSMEGVCHFNMRLAQEAGMRLPRYRQKPVYVARQTVVQRAYNAFAVRVL--------------------------------------------------------------DEEGKRRVVPSLESSEGVLCVEMRIRLYPDGLMSGLLAHLIKAKANGLLEVTALISGDHTR 805
BLAST of mRNA_F-serratus_M_contig141.2965.1 vs. uniprot
Match: D8LN38_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN38_ECTSI) HSP 1 Score: 80.5 bits (197), Expect = 2.850e-14 Identity = 39/61 (63.93%), Postives = 47/61 (77.05%), Query Frame = 2
Query: 608 MRIRLYKYGAMSKLLDRLPKDSANATVQLQGPFLVDSLRPCPAHRNVIMIAAGTGINPMIQ 790
M IR+Y GAMSKLL++L +D+ N TVQLQ PFL++ L P PAHR VIMIAAGT +NP Q
Sbjct: 1 MHIRMYHDGAMSKLLEKLSEDADNPTVQLQVPFLIEKLAPRPAHRKVIMIAAGTAVNPSKQ 61 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig141.2965.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 17
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig141.2965.1 >prot_F-serratus_M_contig141.2965.1 ID=prot_F-serratus_M_contig141.2965.1|Name=mRNA_F-serratus_M_contig141.2965.1|organism=Fucus serratus male|type=polypeptide|length=674bp MNPVQTSLVPVAAAAFLENIQKRKERRRFVFRQFHVCPFVLRQRMDKGKEback to top mRNA from alignment at F-serratus_M_contig141:598673..607720- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig141.2965.1 ID=mRNA_F-serratus_M_contig141.2965.1|Name=mRNA_F-serratus_M_contig141.2965.1|organism=Fucus serratus male|type=mRNA|length=9048bp|location=Sequence derived from alignment at F-serratus_M_contig141:598673..607720- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig141:598673..607720- >mRNA_F-serratus_M_contig141.2965.1 ID=mRNA_F-serratus_M_contig141.2965.1|Name=mRNA_F-serratus_M_contig141.2965.1|organism=Fucus serratus male|type=CDS|length=4044bp|location=Sequence derived from alignment at F-serratus_M_contig141:598673..607720- (Fucus serratus male)back to top |