mRNA_F-serratus_M_contig1409.2953.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig1409.2953.1
Unique NamemRNA_F-serratus_M_contig1409.2953.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
BLAST of mRNA_F-serratus_M_contig1409.2953.1 vs. uniprot
Match: D7FQR0_ECTSI (Glutaredoxin n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FQR0_ECTSI)

HSP 1 Score: 323 bits (828), Expect = 6.310e-106
Identity = 165/254 (64.96%), Postives = 202/254 (79.53%), Query Frame = 1
Query:    1 PVMVFIKDSSQEPKCKFSRKMVEILRGAGVDFGSFNILADEEVRAGLKIYSKWSTFPQLYVKGTLVGGVDEIAKLAEGGDLKSQLAVRAGVDDAQSSTSAAAGGVKSLQELCKKLVARYDKLLSSLRNAEAMLIMKGTPDAPRCGFSRSIMALLREEGIDFESFDILEDQDVRQCLKDLFDWPTFPQLYVRGELMGGLDIVKDMKSSGSLASQLGVATKVLREDRLKTLFSSMNNRVMLFMKGNPETPRCGFSR 762
            PVM+F+K +++EPKCKFSRKM E+LRGA VDFGSF+IL DE+VRAGLK+YS W TFPQLYVKG LVGGVDE++KLAE GDLK+ LA  AGV  +++ T+ A GG KS++E CK +          +R AE M+ MKGTPDAPRCGFSR+++ LLREE I FESFDILEDQ+VR+ LKDL +WPT+PQLYV+GEL+GGLDIVK+MK  G LA QLGV  K   E RLK L +S  + +MLFMKGNP++P+CGFSR
Sbjct:  143 PVMLFMKGNAEEPKCKFSRKMAEMLRGAKVDFGSFDILTDEQVRAGLKVYSNWPTFPQLYVKGVLVGGVDEVSKLAEDGDLKNSLANAAGVKPSKN-TAGAVGGGKSVEERCKDI----------MRRAETMVFMKGTPDAPRCGFSRTLVGLLREENIAFESFDILEDQEVREVLKDLSNWPTYPQLYVQGELVGGLDIVKEMKLEGPLAPQLGVTPKENLESRLKRLMTS--SPIMLFMKGNPDSPQCGFSR 383          
BLAST of mRNA_F-serratus_M_contig1409.2953.1 vs. uniprot
Match: B7ZGM9_9PHAE (Glutaredoxin (Fragment) n=1 Tax=Laminaria digitata TaxID=80365 RepID=B7ZGM9_9PHAE)

HSP 1 Score: 295 bits (755), Expect = 3.690e-97
Identity = 151/230 (65.65%), Postives = 186/230 (80.87%), Query Frame = 1
Query:   73 LRGAGVDFGSFNILADEEVRAGLKIYSKWSTFPQLYVKGTLVGGVDEIAKLAEGGDLKSQLAVRAGVDDAQSSTSAAAGGVKSLQELCKKLVARYDKLLSSLRNAEAMLIMKGTPDAPRCGFSRSIMALLREEGIDFESFDILEDQDVRQCLKDLFDWPTFPQLYVRGELMGGLDIVKDMKSSGSLASQLGVATKVLREDRLKTLFSSMNNRVMLFMKGNPETPRCGFSR 762
            LRGAGVDFGSF+IL+DE+VRAGLK+YS W TFPQLYVKG LVGGVD+ AKLAEGGDLK+QLAV AGVD  ++ T+AAA G KS+Q+ CKKL+A          +AE M+ MKG+PDAPRCGFSR+++ LLR+E I+F SFDILEDQDVRQ LK+L +WPT+PQLYV+GEL+GGLDI+K+MK+ G LA QLG+  K   + RLK L SS +  ++LFMKG P+ P+CGFSR
Sbjct:    1 LRGAGVDFGSFDILSDEQVRAGLKVYSNWPTFPQLYVKGVLVGGVDDAAKLAEGGDLKAQLAVAAGVDVGKA-TAAAADGSKSVQDRCKKLLA----------SAETMVFMKGSPDAPRCGFSRTLVGLLRDEAIEFASFDILEDQDVRQALKELSNWPTYPQLYVKGELVGGLDILKEMKNDGPLAPQLGIKPKESLDSRLKGLISSRS--IVLFMKGTPDAPQCGFSR 217          
BLAST of mRNA_F-serratus_M_contig1409.2953.1 vs. uniprot
Match: G7ZZ90_MEDTR (Monothiol glutaredoxin-S17 protein n=7 Tax=IRL clade TaxID=2233839 RepID=G7ZZ90_MEDTR)

HSP 1 Score: 238 bits (606), Expect = 4.160e-72
Identity = 130/260 (50.00%), Postives = 169/260 (65.00%), Query Frame = 1
Query:    1 PVMVFIKDSSQEPKCKFSRKMVEILRGAGVDFGSFNILADEEVRAGLKIYSKWSTFPQLYVKGTLVGGVDEIAKLAEGGDLKSQLAVRAGVDDAQSS----TSAAAGGVKSLQELCKKLVARYDKLLSSLRNAEAMLIMKGTPDAPRCGFSRSIMALLREEGIDFESFDILEDQDVRQCLKDLFDWPTFPQLYVRGELMGGLDIVKDMKSSGSLASQL---GVATKVLREDRLKTLFSSMNNRVMLFMKGNPETPRCGFS 759
            PV++F+K S +EPKC FSRK+V+IL+   V FGSF+IL+D EVR GLK +S W TFPQLY KG LVGG D    + E G+LK       G+D    +    +    GG+    +L   L +R D L++S      ML MKG PD P+CGFSR ++ +LR+E + FESFDIL D++VRQ LK   +W ++PQLY++GEL+GG DIV +M+ SG L   L   GV  K   EDRLK L +S  + VMLFMKG P+ PRCGFS
Sbjct:  168 PVLLFMKGSPEEPKCGFSRKVVDILKEEKVKFGSFDILSDSEVREGLKKFSNWPTFPQLYCKGELVGGCDIAIAMHESGELKDVFKDH-GIDTVDETNITDSGNTKGGISKSTDLSTNLASRLDGLVNS---GSVMLFMKGKPDEPKCGFSRKVVEILRQENVPFESFDILTDEEVRQGLKVYSNWSSYPQLYIKGELIGGSDIVLEMQKSGELQKTLHEKGVLPKETIEDRLKKLIAS--SPVMLFMKGTPDAPRCGFS 421          
BLAST of mRNA_F-serratus_M_contig1409.2953.1 vs. uniprot
Match: UPI001CC3F326 (monothiol glutaredoxin-S17 n=1 Tax=Telopea speciosissima TaxID=54955 RepID=UPI001CC3F326)

HSP 1 Score: 237 bits (604), Expect = 1.030e-71
Identity = 134/267 (50.19%), Postives = 172/267 (64.42%), Query Frame = 1
Query:    4 VMVFIKDSSQEPKCKFSRKMVEILRGAGVDFGSFNILADEEVRAGLKIYSKWSTFPQLYVKGTLVGGVDEIAKLAEGGDLKS----QLAVRAGVDDAQ--------SSTSAAAGGVKSLQELCKKLVARYDKLLSSLRNAEAMLIMKGTPDAPRCGFSRSIMALLREEGIDFESFDILEDQDVRQCLKDLFDWPTFPQLYVRGELMGGLDIVKDMKSSGSLASQL---GVATKVLREDRLKTLFSSMNNRVMLFMKGNPETPRCGFS 759
            VM+F+K + +EP+C FSRK+VEIL+  GV FGSF+IL D E+R GLK +S W TFPQLY KG L+GG D +  + E G+LK     Q  + AG D+A+        S+ S    GV     L   L +R + L +S   +  ML MKG P+ PRCGFS  ++ +LR+E +DFESFDIL D +VRQ LK   +W ++PQLY+ GEL+GG DIV +M+ SG L   L   GV  K   EDRLK LFSS  + VMLFMKG P+ PRCGFS
Sbjct:  170 VMLFMKGNPEEPRCGFSRKVVEILKEEGVKFGSFDILTDNELREGLKKFSNWPTFPQLYCKGLLLGGCDIVIAMHESGELKEVFGDQGVLAAGPDEAKKTGTGNIYSTNSLQCSGVSDSTGLSTALTSRLESLTNS---SPVMLFMKGKPEEPRCGFSSKVVEILRQEKVDFESFDILTDDEVRQGLKVYSNWSSYPQLYIGGELIGGSDIVLEMQKSGELMRVLAEKGVTNKEPLEDRLKKLFSS--SPVMLFMKGTPDAPRCGFS 431          
BLAST of mRNA_F-serratus_M_contig1409.2953.1 vs. uniprot
Match: A0A5K1CKL3_9MAGN (Uncharacterized protein (Fragment) n=3 Tax=Nymphaea colorata TaxID=210225 RepID=A0A5K1CKL3_9MAGN)

HSP 1 Score: 234 bits (597), Expect = 1.240e-71
Identity = 128/267 (47.94%), Postives = 173/267 (64.79%), Query Frame = 1
Query:    1 PVMVFIKDSSQEPKCKFSRKMVEILRGAGVDFGSFNILADEEVRAGLKIYSKWSTFPQLYVKGTLVGGVDEIAKLAEGGDLK-----------SQLAVRAGVDDAQSSTSAAAGGVKSLQELCKKLVARYDKLLSSLRNAEAMLIMKGTPDAPRCGFSRSIMALLREEGIDFESFDILEDQDVRQCLKDLFDWPTFPQLYVRGELMGGLDIVKDMKSSGSLASQL---GVATKVLREDRLKTLFSSMNNRVMLFMKGNPETPRCGFS 759
            PV +F+K S   PKC FS+K+V IL+  GVDFGSF+IL D+EVR G+K YS W TFPQL+ KG L+GG D  + + E G+LK           + L+V A  ++A SS +   GG+     L + L +R + L++S      ML MKG PD PRCGFSR ++ +L+EE ++F SFD+L D  VRQ LK L +W ++PQ+Y++GEL+GG DI+ +M+ SG L   L   G+  K   +DRLK L SS  ++ MLFMKG PE PRCGFS
Sbjct:   85 PVFLFMKGSPDAPKCGFSQKVVNILKEEGVDFGSFDILTDDEVREGMKKYSNWPTFPQLFCKGELLGGCDIASAMHESGELKEVFRDHGIHLVTSLSVNADTEEA-SSAAGMIGGITESSGLNEALTSRLEDLINS---HPVMLFMKGKPDEPRCGFSRKVVEILKEEKVEFSSFDVLTDDTVRQGLKVLSNWSSYPQVYIKGELIGGSDIMLEMQKSGELKRVLDEKGIIPKESLDDRLKKLVSS--SKTMLFMKGTPEAPRCGFS 345          
BLAST of mRNA_F-serratus_M_contig1409.2953.1 vs. uniprot
Match: A0A061GFS9_THECC (Glutaredoxin S17 n=4 Tax=Malvaceae TaxID=3629 RepID=A0A061GFS9_THECC)

HSP 1 Score: 236 bits (601), Expect = 2.200e-71
Identity = 128/256 (50.00%), Postives = 169/256 (66.02%), Query Frame = 1
Query:    1 PVMVFIKDSSQEPKCKFSRKMVEILRGAGVDFGSFNILADEEVRAGLKIYSKWSTFPQLYVKGTLVGGVDEIAKLAEGGDLKSQLAVRAGVDDAQSSTSAAAGGVKSLQELCKKLVARYDKLLSSLRNAEAMLIMKGTPDAPRCGFSRSIMALLREEGIDFESFDILEDQDVRQCLKDLFDWPTFPQLYVRGELMGGLDIVKDMKSSGSLASQL---GVATKVLREDRLKTLFSSMNNRVMLFMKGNPETPRCGFS 759
            PVM+F+K S +EPKC FSRK+V+IL    V FG+F+I++D EVR GLK +S W TFPQLY KG L+GG D +  + E G+LK       GVD   S T    GG+ +   L   L +R   L++S   +  ML MKG PD P+CGFS  ++ +L +E +DF+SFDIL D +VRQ LK L +W ++PQLY++GEL+GG DIV +M+ SG L   L   G+  K   EDRL++L SS  + VMLFMKG P+ PRCGFS
Sbjct:  173 PVMLFMKGSPEEPKCGFSRKVVDILNDERVKFGTFDIISDNEVREGLKKFSNWPTFPQLYCKGELLGGCDIVIAMHESGELKEVFRDH-GVD--VSGTEQGTGGISAPSGLSTNLASRLQSLINS---SPVMLFMKGKPDEPKCGFSHKVVEILEQEKVDFKSFDILLDDEVRQGLKVLSNWSSYPQLYIKGELIGGSDIVLEMQKSGELRRVLAEKGITKKESIEDRLRSLISS--SPVMLFMKGTPDAPRCGFS 420          
BLAST of mRNA_F-serratus_M_contig1409.2953.1 vs. uniprot
Match: A0A6A6LPJ7_HEVBR (Uncharacterized protein n=1 Tax=Hevea brasiliensis TaxID=3981 RepID=A0A6A6LPJ7_HEVBR)

HSP 1 Score: 232 bits (592), Expect = 6.080e-71
Identity = 127/262 (48.47%), Postives = 171/262 (65.27%), Query Frame = 1
Query:    1 PVMVFIKDSSQEPKCKFSRKMVEILRGAGVDFGSFNILADEEVRAGLKIYSKWSTFPQLYVKGTLVGGVDEIAKLAEGGDLKSQLAVRAGVD------DAQSSTSAAAGGVKSLQELCKKLVARYDKLLSSLRNAEAMLIMKGTPDAPRCGFSRSIMALLREEGIDFESFDILEDQDVRQCLKDLFDWPTFPQLYVRGELMGGLDIVKDMKSSGSLASQL---GVATKVLREDRLKTLFSSMNNRVMLFMKGNPETPRCGFS 759
            PVM+F+K S + P+C FSRK+V+IL+   V FGSF+IL+D EVR GLK +S W TFPQLY KG L+GG D    + E G+LK       G+D        QS + +  GGV     L   L +R   L++S   +  ML MKG PD P+CGFS  ++ +L+EE ++FESF+IL D +VRQ LK   +W +FPQLY++GEL+GG DIV +M+ SG L   L   G+ +K   EDRL++L +S  + VMLFMKG+P+ PRCGFS
Sbjct:   85 PVMLFMKGSPEAPRCGFSRKVVDILKDENVKFGSFDILSDNEVREGLKKFSNWPTFPQLYCKGELLGGSDIAIAMHESGELKDVFRDH-GIDANHSDEQKQSDSGSGKGGVSESTGLSATLTSRLKSLINS---SPVMLFMKGNPDEPKCGFSGKVVEILKEEKVNFESFNILSDDEVRQGLKVYSNWSSFPQLYIKGELIGGSDIVLEMQKSGELKRLLVEKGIVSKETLEDRLRSLIAS--SPVMLFMKGSPDAPRCGFS 340          
BLAST of mRNA_F-serratus_M_contig1409.2953.1 vs. uniprot
Match: A0A068TU35_COFCA (Thioredoxin domain-containing protein n=3 Tax=Coffea TaxID=13442 RepID=A0A068TU35_COFCA)

HSP 1 Score: 234 bits (598), Expect = 6.320e-71
Identity = 129/262 (49.24%), Postives = 173/262 (66.03%), Query Frame = 1
Query:    1 PVMVFIKDSSQEPKCKFSRKMVEILRGAGVDFGSFNILADEEVRAGLKIYSKWSTFPQLYVKGTLVGGVDEIAKLAEGGDLKSQLAVRAGVDDAQSSTSAAA------GGVKSLQELCKKLVARYDKLLSSLRNAEAMLIMKGTPDAPRCGFSRSIMALLREEGIDFESFDILEDQDVRQCLKDLFDWPTFPQLYVRGELMGGLDIVKDMKSSGSLASQL---GVATKVLREDRLKTLFSSMNNRVMLFMKGNPETPRCGFS 759
            PVM+F+K S +EP+C FSR +V+IL+   + FGSF+IL D+EVR GLK +S W T+PQLY KG L+GG D +  + E G+LK  L +  G + + SS + A       GG+     L   L +R D L++S   +  ML MKG PDAPRCGFSR ++ +LR+E IDF+SFDIL D +VRQ LK   +W ++PQLY++GEL+GG DIV DM+ SG L+  L   G+   +  E RLK L +S  + VMLFMKG P+  RCGFS
Sbjct:  166 PVMLFMKGSPEEPRCGFSRTVVDILKKEKIKFGSFDILTDDEVREGLKKFSNWPTYPQLYCKGELLGGCDIVTAMHESGELKEVL-LDHGTEASDSSKAEATEPGMGKGGISEASGLSADLNSRLDSLINS---SPVMLFMKGEPDAPRCGFSRKVVDILRQEKIDFKSFDILTDDEVRQGLKVYSNWSSYPQLYIKGELIGGSDIVLDMQKSGELSKVLAEKGIPNGITLEVRLKQLITS--SPVMLFMKGTPDASRCGFS 421          
BLAST of mRNA_F-serratus_M_contig1409.2953.1 vs. uniprot
Match: A0A166IRX7_DAUCS (Thioredoxin domain-containing protein n=1 Tax=Daucus carota subsp. sativus TaxID=79200 RepID=A0A166IRX7_DAUCS)

HSP 1 Score: 234 bits (598), Expect = 6.810e-71
Identity = 130/264 (49.24%), Postives = 172/264 (65.15%), Query Frame = 1
Query:    4 VMVFIKDSSQEPKCKFSRKMVEILRGAGVDFGSFNILADEEVRAGLKIYSKWSTFPQLYVKGTLVGGVDEIAKLAEGGDL---------KSQLAVRAGVDDAQSSTSAAAGGVKSLQELCKKLVARYDKLLSSLRNAEAMLIMKGTPDAPRCGFSRSIMALLREEGIDFESFDILEDQDVRQCLKDLFDWPTFPQLYVRGELMGGLDIVKDMKSSGSLASQL---GVATKVLREDRLKTLFSSMNNRVMLFMKGNPETPRCGFS 759
            VM+F+K + QEP+C FSRK+V+IL+   V FGSF+IL D EVR GLK +S W T+PQLY KG L+GG D +  + EGG+L         KS  +  A V +A+       GG+     L   L +R + L++S      ML MKG PD P+CGFSR ++ +LREE ++FESFDIL D++VRQ LK   +W ++PQLY++GEL+GG DIV +M+ SG L + L   G+  K   EDRLK L SS  + VMLFMKG P+ PRCGFS
Sbjct:  170 VMLFMKGNPQEPQCGFSRKVVDILKEYDVKFGSFDILTDNEVREGLKKFSNWPTYPQLYCKGELIGGSDIVIAMHEGGELTEVFGDHGIKSSHSREAKVTEAEIGK----GGISGSSGLSATLTSRLEGLINS---GSVMLFMKGKPDEPKCGFSRKVVDILREEKVEFESFDILSDEEVRQGLKVYSNWSSYPQLYIKGELIGGSDIVLEMQKSGELKNVLAEKGIIQKQTLEDRLKKLISS--SPVMLFMKGTPDAPRCGFS 424          
BLAST of mRNA_F-serratus_M_contig1409.2953.1 vs. uniprot
Match: A0A833R056_9POAL (Monothiol glutaredoxin-S11 n=1 Tax=Carex littledalei TaxID=544730 RepID=A0A833R056_9POAL)

HSP 1 Score: 233 bits (595), Expect = 7.720e-71
Identity = 128/258 (49.61%), Postives = 171/258 (66.28%), Query Frame = 1
Query:    1 PVMVFIKDSSQEPKCKFSRKMVEILRGAGVDFGSFNILADEEVRAGLKIYSKWSTFPQLYVKGTLVGGVDEIAKLAEGGDLKSQLAVRAGVDDAQSSTSAAAGGVKSLQELCKKLVARYDKLLSSLRNAEAMLIMKGTPDAPRCGFSRSIMALLREEGIDFESFDILEDQDVRQCLKDLFDWPTFPQLYVRGELMGGLDIVKDMKSSGSLASQL-----GVATKVLREDRLKTLFSSMNNRVMLFMKGNPETPRCGFS 759
            PV +F+K S +EPKCKFSRK+V IL+  G+ FGSF+IL+D EVR GLK+YS W TFPQLY KG L+GG D I  + EGG+L+        V ++ SS S    G+ +       LV+R  +L+     +  M+ MKG+P+ P+CGFS  ++A+L+EE + F+SFDIL D+ VRQ LK    WP++PQLY++GEL+GG DIV +M  +G L S L     G A     ++RLK L SS  + VMLFMKGNP+ PRCGFS
Sbjct:  148 PVFLFMKGSPEEPKCKFSRKVVGILKDEGISFGSFDILSDNEVREGLKVYSNWPTFPQLYFKGELLGGCDIIVSMKEGGELQDL------VKESNSSDSKDDSGLDA------HLVSRLKELIDL---SPVMVFMKGSPEEPKCGFSGKLVAILKEECVPFKSFDILSDEAVRQGLKVFSKWPSYPQLYIKGELIGGSDIVLEMHKNGELKSLLEEKSIGKAEAETLDERLKRLISS--SPVMLFMKGNPDEPRCGFS 388          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1409.2953.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FQR0_ECTSI6.310e-10664.96Glutaredoxin n=2 Tax=Ectocarpus TaxID=2879 RepID=D... [more]
B7ZGM9_9PHAE3.690e-9765.65Glutaredoxin (Fragment) n=1 Tax=Laminaria digitata... [more]
G7ZZ90_MEDTR4.160e-7250.00Monothiol glutaredoxin-S17 protein n=7 Tax=IRL cla... [more]
UPI001CC3F3261.030e-7150.19monothiol glutaredoxin-S17 n=1 Tax=Telopea specios... [more]
A0A5K1CKL3_9MAGN1.240e-7147.94Uncharacterized protein (Fragment) n=3 Tax=Nymphae... [more]
A0A061GFS9_THECC2.200e-7150.00Glutaredoxin S17 n=4 Tax=Malvaceae TaxID=3629 RepI... [more]
A0A6A6LPJ7_HEVBR6.080e-7148.47Uncharacterized protein n=1 Tax=Hevea brasiliensis... [more]
A0A068TU35_COFCA6.320e-7149.24Thioredoxin domain-containing protein n=3 Tax=Coff... [more]
A0A166IRX7_DAUCS6.810e-7149.24Thioredoxin domain-containing protein n=1 Tax=Dauc... [more]
A0A833R056_9POAL7.720e-7149.61Monothiol glutaredoxin-S11 n=1 Tax=Carex littledal... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1409contigF-serratus_M_contig1409:152073..154741 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score319.7
Seed ortholog evalue1.3e-84
Seed eggNOG ortholog2880.D7FQR0
Hectar predicted targeting categoryother localisation
GOsGO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006810,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009266,GO:0009408,GO:0009628,GO:0009914,GO:0009926,GO:0009987,GO:0010817,GO:0033554,GO:0044237,GO:0044424,GO:0044444,GO:0044464,GO:0050789,GO:0050794,GO:0050896,GO:0051179,GO:0051234,GO:0051716,GO:0051726,GO:0060918,GO:0065007,GO:0065008,GO:0072593
EggNOG free text desc.protein disulfide oxidoreductase activity
EggNOG OGsCOG0278@1,KOG0911@2759
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons6
Model size786
Cds size780
Stop1
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929392.3594713-CDS-F-serratus_M_contig1409:152072..1521961622929392.3594713-CDS-F-serratus_M_contig1409:152072..152196Fucus serratus maleCDSF-serratus_M_contig1409 152073..152196 -
1690962831.2453177-CDS-F-serratus_M_contig1409:152072..1521961690962831.2453177-CDS-F-serratus_M_contig1409:152072..152196Fucus serratus maleCDSF-serratus_M_contig1409 152073..152196 -
1622929392.374564-CDS-F-serratus_M_contig1409:152646..1527471622929392.374564-CDS-F-serratus_M_contig1409:152646..152747Fucus serratus maleCDSF-serratus_M_contig1409 152647..152747 -
1690962831.263389-CDS-F-serratus_M_contig1409:152646..1527471690962831.263389-CDS-F-serratus_M_contig1409:152646..152747Fucus serratus maleCDSF-serratus_M_contig1409 152647..152747 -
1622929392.408227-CDS-F-serratus_M_contig1409:153091..1532691622929392.408227-CDS-F-serratus_M_contig1409:153091..153269Fucus serratus maleCDSF-serratus_M_contig1409 153092..153269 -
1690962831.2738419-CDS-F-serratus_M_contig1409:153091..1532691690962831.2738419-CDS-F-serratus_M_contig1409:153091..153269Fucus serratus maleCDSF-serratus_M_contig1409 153092..153269 -
1622929392.4253244-CDS-F-serratus_M_contig1409:153605..1538141622929392.4253244-CDS-F-serratus_M_contig1409:153605..153814Fucus serratus maleCDSF-serratus_M_contig1409 153606..153814 -
1690962831.281926-CDS-F-serratus_M_contig1409:153605..1538141690962831.281926-CDS-F-serratus_M_contig1409:153605..153814Fucus serratus maleCDSF-serratus_M_contig1409 153606..153814 -
1622929392.437148-CDS-F-serratus_M_contig1409:154150..1542471622929392.437148-CDS-F-serratus_M_contig1409:154150..154247Fucus serratus maleCDSF-serratus_M_contig1409 154151..154247 -
1690962831.2905943-CDS-F-serratus_M_contig1409:154150..1542471690962831.2905943-CDS-F-serratus_M_contig1409:154150..154247Fucus serratus maleCDSF-serratus_M_contig1409 154151..154247 -
1622929392.4541848-CDS-F-serratus_M_contig1409:154664..1547351622929392.4541848-CDS-F-serratus_M_contig1409:154664..154735Fucus serratus maleCDSF-serratus_M_contig1409 154665..154735 -
1690962831.299297-CDS-F-serratus_M_contig1409:154664..1547351690962831.299297-CDS-F-serratus_M_contig1409:154664..154735Fucus serratus maleCDSF-serratus_M_contig1409 154665..154735 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929392.470159-UTR-F-serratus_M_contig1409:154735..1547411622929392.470159-UTR-F-serratus_M_contig1409:154735..154741Fucus serratus maleUTRF-serratus_M_contig1409 154736..154741 -
1690962831.3083763-UTR-F-serratus_M_contig1409:154735..1547411690962831.3083763-UTR-F-serratus_M_contig1409:154735..154741Fucus serratus maleUTRF-serratus_M_contig1409 154736..154741 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1409.2953.1prot_F-serratus_M_contig1409.2953.1Fucus serratus malepolypeptideF-serratus_M_contig1409 152073..154735 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig1409.2953.1

>prot_F-serratus_M_contig1409.2953.1 ID=prot_F-serratus_M_contig1409.2953.1|Name=mRNA_F-serratus_M_contig1409.2953.1|organism=Fucus serratus male|type=polypeptide|length=260bp
MVFIKDSSQEPKCKFSRKMVEILRGAGVDFGSFNILADEEVRAGLKIYSK
WSTFPQLYVKGTLVGGVDEIAKLAEGGDLKSQLAVRAGVDDAQSSTSAAA
GGVKSLQELCKKLVARYDKLLSSLRNAEAMLIMKGTPDAPRCGFSRSIMA
LLREEGIDFESFDILEDQDVRQCLKDLFDWPTFPQLYVRGELMGGLDIVK
DMKSSGSLASQLGVATKVLREDRLKTLFSSMNNRVMLFMKGNPETPRCGF
SRWNTVPAV*
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mRNA from alignment at F-serratus_M_contig1409:152073..154741-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig1409.2953.1 ID=mRNA_F-serratus_M_contig1409.2953.1|Name=mRNA_F-serratus_M_contig1409.2953.1|organism=Fucus serratus male|type=mRNA|length=2669bp|location=Sequence derived from alignment at F-serratus_M_contig1409:152073..154741- (Fucus serratus male)
CCGGTGATGGTGTTCATCAAGGATTCATCTCAAGAACCCAAGTGCAAGTT CAGTCGGAAGATGGTTGAAATTCTCCGGTGGGTTCCCGACAGAGGGATTT GACATCCTCCTCAGTCGGCGTCGTTGAGCTGTAGAATGCTCCTCATATGT TGATATTTTAATGCATAGTGAGTGGTGGTAAAGACTCCGAGGCATATCGA TGTTGCCCTGATGGATAGACGCGCCAAGAGACGAGTTCCACGGTGCCGTG CCCACCCCTGGTCGTGCGTAAGACGCTCCGCTTCGTCTCCATATAAGAAG TCTTCCTTCTCTTGTTTCTCATTTCCTCTCCATTTTACAAGTCCTCCTTC TCTTGCTTCTTTCTAGTTTATCAATTTAGTAATTTAGTAGCAGTGCAGTG TCACGGGTCCTCGTCATACGGCGCTACCATTAGCTCACGGTAGATGTAAA TAGAGCCGCTGTGTCCCCGTTTTGCTACGTGTGGTATGTCACAGGGGTGC CGGGGTGGACTTTGGATCGTTCAACATCCTCGCGGACGAGGAGGTGCGGG CTGGCCTCAAGATATACTCCAAATGGTCTACGTTTCCCCAGGTACAACAA ATAACGTTTTAGTATAGCTGTCAAACGACTCCCAGTATATTCCGTTTGGT GGACTGAATTTTTCGCAGAGCCAGCCAGCCGGCCCGTCCCACATGCGTCG CGAATCTCATTTTGCTTCTGTAGACATAGCAGACATAGCAGACATAGCAG ACATAGCATGCACAGCCCCCCTCGGAGATATTATGTTTGCAAGAAGTAAT GTACCCGGTAGACACATCACCTACTGTACCTTGTGCCGTATTAATAGCAT GCCACCCAATCAAATCAAGTTATATTCACGTAGACTTGTGTGTCTCTTGC GGCTATGGCTGTGTCTGGGGTGCGCAGCTGTATGTGAAGGGAACACTGGT CGGAGGGGTAGACGAGATAGCCAAGCTTGCCGAGGGGGGGGATTTGAAGT CGCAGTTGGCTGTCAGGGCTGGGGTCGATGATGCGCAATCTTCAACCTCC GCTGCTGCAGGCGGGGTCAAGTCCCTGCAAGAACTATGCAAGAAACTTGT GGCGAGGTATGATAAACTACTTAGCTCTCTCAGAAAGTCGCTGGCTTGGC CCCGTCCGTCTAGGATTCAAAATCTCTTGTCAAGTCGTGGCTTTCGAAGA AGGATAGGATAGTCCCTCGCTCGTTCGATCGTATACGGTAAACAGCTGCA ACCGCTATCGCTGTTTGCTTTTTAATTTACAACTCTTGAAAAGCTCTGAA CTCTACTGAAAATACTTCTACACGTCTTGTTTAGAAAGATGTATCCTCTG TGCTTTCCCCGCAGCAGTCGCTGTGATGTTGTTCAGCACGTAATAAATTA GCACCCGCTGTTCGTATGTATGATATGTACAATGTATACGTTACGTTACG TGTGCGTGGGCTTGGGTCGCAGCGCGGAAGCGATGTTGATCATGAAGGGC ACTCCAGACGCTCCCCGATGCGGCTTCAGCCGTTCGATCATGGCCTTGTT GCGCGAAGAGGGCATTGACTTCGAGTCTTTCGATATCTTGGAGGATCAAG ACGTGCGGCAGTGTCTCAAAGACTTATTCGATTGGCCAACCTTTCCTCAG GTGATCAATCATCGTTGTATTATAATAGTCAGTGATGACTGCCTCTTCAA AGCCGTATGCATAGACTGAGGATGATGAAGACAAGATCGCACCTCAAACA CGCTAACACGCCTACAGTACAGTACAGTACAGTACAGTACGCTTAAACCA CTGTTTGTTACCAGTATGGTACACCCGACGCCAAGTCGTGCTTGTAATCG AAGAGCATGATAGTGTCAACACCCAAGGAAATTTGTAATCAATCGAAACT ACAGTACCTGCCGCATGTTTCATGTCTGCTAAGATGTATCGTTTCTTCTT TACGCTCAATGGTTTATGTCTCCTGTCCCATGTCCCGCCTGCAGTTGTAC GTGAGAGGAGAGCTGATGGGAGGATTGGATATCGTGAAGGACATGAAGAG CAGCGGATCTCTTGCATCGCAGCTGGGCGTGGCAACCAAGGTGCTGTCTA CCTACTGAAATTTGGAGTCCCAATCCCCCCCCCGTCGCATGGATGTTTCG GTCATTAGTATTCGTATTATTAAGAAGAGTATTTGACACGCTTGATATGG TTGAGATTTTTCCCTCTATCGGTGACTGAGCCAGCCGTCGGTCCTTTTAT CTGGACAAGATTCAACAGGTGTCACGTGTAACCGCGGTGGTCATGGGGCA ATGGGACAAGGACGCGCGGCTAGACTGTGCTTCTACTCTATAGATACGAC GCTTTCACCAACCCAAGTTGTTATAGATGTAGGCCTTTTTTTGCTATATA CCAGGTAACGATTGCGGCTTGCAATCGCATCGTACGACTCTCCCGAAAAA TTTCATCGAGACATCTGTATTATTTCGCATGTCGACGATCAAGCAGTACC ATACATTTAAAGCCGCCTTCTGGGTCTCACGCGTGACCAGGCTAGCAGGG AAGACCGACTCAAGACGCTCTTTTCTTCTATGAATAACAGAGTAATGCTC TTCATGAAGGGAAACCCAGAGACTCCGCGGTGCGGTTTTTCTCGTTGGAA TACTGTGCCAGCGGTATGA
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Coding sequence (CDS) from alignment at F-serratus_M_contig1409:152073..154741-

>mRNA_F-serratus_M_contig1409.2953.1 ID=mRNA_F-serratus_M_contig1409.2953.1|Name=mRNA_F-serratus_M_contig1409.2953.1|organism=Fucus serratus male|type=CDS|length=1560bp|location=Sequence derived from alignment at F-serratus_M_contig1409:152073..154741- (Fucus serratus male)
ATGGTGTTCATCAAGGATTCATCTCAAGAACCCAAGTGCAAGTTCAGTCG
GAAGATGGTTGAAATTCTCCGATGGTGTTCATCAAGGATTCATCTCAAGA
ACCCAAGTGCAAGTTCAGTCGGAAGATGGTTGAAATTCTCCGGGGTGCCG
GGGTGGACTTTGGATCGTTCAACATCCTCGCGGACGAGGAGGTGCGGGCT
GGCCTCAAGATATACTCCAAATGGTCTACGTTTCCCCAGGGGTGCCGGGG
TGGACTTTGGATCGTTCAACATCCTCGCGGACGAGGAGGTGCGGGCTGGC
CTCAAGATATACTCCAAATGGTCTACGTTTCCCCAGCTGTATGTGAAGGG
AACACTGGTCGGAGGGGTAGACGAGATAGCCAAGCTTGCCGAGGGGGGGG
ATTTGAAGTCGCAGTTGGCTGTCAGGGCTGGGGTCGATGATGCGCAATCT
TCAACCTCCGCTGCTGCAGGCGGGGTCAAGTCCCTGCAAGAACTATGCAA
GAAACTTGTGGCGAGGTATGATAAACTACTTAGCTCTCTCAGAAACTGTA
TGTGAAGGGAACACTGGTCGGAGGGGTAGACGAGATAGCCAAGCTTGCCG
AGGGGGGGGATTTGAAGTCGCAGTTGGCTGTCAGGGCTGGGGTCGATGAT
GCGCAATCTTCAACCTCCGCTGCTGCAGGCGGGGTCAAGTCCCTGCAAGA
ACTATGCAAGAAACTTGTGGCGAGGTATGATAAACTACTTAGCTCTCTCA
GAAACGCGGAAGCGATGTTGATCATGAAGGGCACTCCAGACGCTCCCCGA
TGCGGCTTCAGCCGTTCGATCATGGCCTTGTTGCGCGAAGAGGGCATTGA
CTTCGAGTCTTTCGATATCTTGGAGGATCAAGACGTGCGGCAGTGTCTCA
AAGACTTATTCGATTGGCCAACCTTTCCTCAGCGCGGAAGCGATGTTGAT
CATGAAGGGCACTCCAGACGCTCCCCGATGCGGCTTCAGCCGTTCGATCA
TGGCCTTGTTGCGCGAAGAGGGCATTGACTTCGAGTCTTTCGATATCTTG
GAGGATCAAGACGTGCGGCAGTGTCTCAAAGACTTATTCGATTGGCCAAC
CTTTCCTCAGTTGTACGTGAGAGGAGAGCTGATGGGAGGATTGGATATCG
TGAAGGACATGAAGAGCAGCGGATCTCTTGCATCGCAGCTGGGCGTGGCA
ACCAAGGTGCTTTGTACGTGAGAGGAGAGCTGATGGGAGGATTGGATATC
GTGAAGGACATGAAGAGCAGCGGATCTCTTGCATCGCAGCTGGGCGTGGC
AACCAAGGTGCTCAGGGAAGACCGACTCAAGACGCTCTTTTCTTCTATGA
ATAACAGAGTAATGCTCTTCATGAAGGGAAACCCAGAGACTCCGCGGTGC
GGTTTTTCTCGTTGGAATACTGTGCCAGCGGTATGACAGGGAAGACCGAC
TCAAGACGCTCTTTTCTTCTATGAATAACAGAGTAATGCTCTTCATGAAG
GGAAACCCAGAGACTCCGCGGTGCGGTTTTTCTCGTTGGAATACTGTGCC
AGCGGTATGA
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