mRNA_F-serratus_M_contig1409.2952.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig1409.2952.1 vs. uniprot
Match: A0A6H5K6C6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6C6_9PHAE) HSP 1 Score: 191 bits (485), Expect = 1.860e-56 Identity = 103/176 (58.52%), Postives = 120/176 (68.18%), Query Frame = -1
Query: 275 CLGFAGIHKDGPGETLLDRVRRAVWEMLYADDAGIVSRSPAGLARMRTVIVEIFGAFGLAVLEK*TETRLMRAPEKAQQPEETPTPPLPALGIAAAGQKYHQVHQFVYLGGIITEDADITRDINRRTKVARGCFRKFFTELFDRPSAPLRLKARLLKAEVMEALLYGCMTAVVASG 802
CL G ET LDRVRRAVW MLYADDAG+VSRS GLARM T+IVE+FG FGL + EK TET LMRA +K + PP L I AAGQ+Y Q +F YLGG++ E D+TR+IN R++ A C R++ ELFDRP AP RLK RLL+AE MEALLYGCMT SG
Sbjct: 48 CLEEGKTEAGGREETPLDRVRRAVWGMLYADDAGVVSRSAEGLARMMTIIVEVFGEFGLTLSEKKTETLLMRAKDKPTTSQPASPPP---LTIEAAGQRYAQTTEFRYLGGLVNEHGDLTREINYRSRGAWACLRRYGRELFDRPQAPFRLKIRLLQAEAMEALLYGCMTWSPLSG 220
BLAST of mRNA_F-serratus_M_contig1409.2952.1 vs. uniprot
Match: A0A6H5KBT2_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBT2_9PHAE) HSP 1 Score: 197 bits (502), Expect = 9.320e-56 Identity = 109/186 (58.60%), Postives = 125/186 (67.20%), Query Frame = -1
Query: 245 CLGFAGIHKDGPGETLLDRVRRAVWEMLYADDAGIVSRSPAGLARMRTVIVEIFGAFGLAVLEK*TETRLMRAPEKAQQPEETPTPPLPALGIAAAGQKYHQVHQFVYLGGIITEDADITRDINRRTKVARGCFRKFFTELFDRPSAPLRLKARLLKAEVMEALLYGCMTAVVASGAIRVARPPSH 802
CL G ET LDRVRRAVW MLYADDAG+VSRS GLARM T+IVE+FG FGL V EK TET LMRA +K + P PP P L I AAGQKY Q +F YLGG++ E D+TR+IN R++ A C R++ ELFDRP AP RLK RLL+AE MEALLYGCMT SG + R H
Sbjct: 254 CLEEGKTEAGGGEETPLDRVRRAVWGMLYADDAGVVSRSAEGLARMMTIIVEVFGEFGLTVSEKKTETLLMRAKDKPTTTSQ-PAPP-PPLTIEAAGQKYAQTTEFRYLGGLVNEHGDLTREINYRSRGAWACLRRYGRELFDRPQAPFRLKIRLLRAEAMEALLYGCMTWSPLSGHYQTLRSIHH 437
BLAST of mRNA_F-serratus_M_contig1409.2952.1 vs. uniprot
Match: A0A6H5L6A1_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6A1_9PHAE) HSP 1 Score: 194 bits (492), Expect = 6.520e-55 Identity = 110/194 (56.70%), Postives = 128/194 (65.98%), Query Frame = -1
Query: 221 CLGFAGIHKDGPGETLLDRVRRAVWEMLYADDAGIVSRSPAGLARMRTVIVEIFGAFGLAVLEK*TETRLMRAPEKAQQPEETPTPPLPALGIAAAGQKYHQVHQFVYLGGIITEDADITRDINRRTKVARGCFRKFFTELFDRPSAPLRLKARLLKAEVMEALLYGCMTAVVASGAIRVARPPSHPKTWVLRG 802
CL G ET LDRVRRAVW +LYADDAG+VSRS GLARM T+IVE+FG FGL V EK TET LMRA +K + P PP P L I AAGQKY Q +F YLGG++ E D+TR+IN R++ A C R++ ELFDRP AP RLK RLL+AE MEALLYGCM SG + R H +LRG
Sbjct: 200 CLEEGKTEAGGGEETPLDRVRRAVWGVLYADDAGVVSRSAEGLARMMTIIVEVFGEFGLTVSEKKTETLLMRAKDKPTTTSQ-PIPP-PPLTIEAAGQKYAQTTEFRYLGGLVNEHGDLTREINYRSRGAWACLRRYGRELFDRPQAPFRLKIRLLQAEAMEALLYGCMAWSPLSGHYQTLRSIHH--RLLLRG 389
BLAST of mRNA_F-serratus_M_contig1409.2952.1 vs. uniprot
Match: A0A6H5K8C3_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8C3_9PHAE) HSP 1 Score: 197 bits (500), Expect = 3.270e-54 Identity = 109/186 (58.60%), Postives = 125/186 (67.20%), Query Frame = -1
Query: 245 CLGFAGIHKDGPGETLLDRVRRAVWEMLYADDAGIVSRSPAGLARMRTVIVEIFGAFGLAVLEK*TETRLMRAPEKAQQPEETPTPPLPALGIAAAGQKYHQVHQFVYLGGIITEDADITRDINRRTKVARGCFRKFFTELFDRPSAPLRLKARLLKAEVMEALLYGCMTAVVASGAIRVARPPSH 802
CL G ET LDRVRRAVW MLYADDAG+VSRS GLARM T+IVE+FG FGL V EK TET LMRA +K + P PP P L I AAGQKY Q +F YLGG++ E D+TR+IN R++ A C R++ ELFDRP AP RLK RLL+AE MEALLYGCMT SG + R H
Sbjct: 377 CLEEGKTEGGGGEETPLDRVRRAVWGMLYADDAGVVSRSAEGLARMMTIIVEVFGEFGLTVSEKKTETLLMRAKDKPTTTSQ-PAPP-PPLTIEAAGQKYAQTTEFRYLGGLVNEHGDLTREINYRSRGAWACLRRYGRELFDRPQAPFRLKIRLLQAEAMEALLYGCMTWSPLSGHYQTLRSIHH 560
BLAST of mRNA_F-serratus_M_contig1409.2952.1 vs. uniprot
Match: A0A6H5JBT6_9PHAE (Reverse transcriptase domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBT6_9PHAE) HSP 1 Score: 190 bits (482), Expect = 5.820e-54 Identity = 106/186 (56.99%), Postives = 122/186 (65.59%), Query Frame = -1
Query: 245 CLGFAGIHKDGPGETLLDRVRRAVWEMLYADDAGIVSRSPAGLARMRTVIVEIFGAFGLAVLEK*TETRLMRAPEKAQQPEETPTPPLPALGIAAAGQKYHQVHQFVYLGGIITEDADITRDINRRTKVARGCFRKFFTELFDRPSAPLRLKARLLKAEVMEALLYGCMTAVVASGAIRVARPPSH 802
CL G ET LDRV+RAVW MLYADDAG+VSRS GLARM T+IVE+FG FGL V EK TET LMR K Q P PP P L I AAGQKY Q +F YLGG++ E D+TR+ N R++ A C R++ ELFDRP AP RLK RLL+AE M+ALLYGCMT SG + R H
Sbjct: 121 CLEEGKTEAGGGEETPLDRVQRAVWGMLYADDAGVVSRSAEGLARMMTIIVEVFGEFGLTVSEKKTETLLMR---KGQADTSQPAPP-PPLTIEAAGQKYAQKTEFRYLGGLVNEHGDLTRENNYRSRGAWACLRRYGRELFDRPQAPFRLKIRLLQAEAMDALLYGCMTWSPLSGHYQTLRSIHH 302
BLAST of mRNA_F-serratus_M_contig1409.2952.1 vs. uniprot
Match: A0A6H5K2V9_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2V9_9PHAE) HSP 1 Score: 192 bits (487), Expect = 1.270e-53 Identity = 104/174 (59.77%), Postives = 120/174 (68.97%), Query Frame = -1
Query: 281 CLGFAGIHKDGPGETLLDRVRRAVWEMLYADDAGIVSRSPAGLARMRTVIVEIFGAFGLAVLEK*TETRLMRAPEKAQQPEETPTPPLPALGIAAAGQKYHQVHQFVYLGGIITEDADITRDINRRTKVARGCFRKFFTELFDRPSAPLRLKARLLKAEVMEALLYGCMTAVVA 802
CL G GET LDRVRRAVW MLYADDAG+VSRS GLARM T+IVE+FG FGL V EK TET LMRA +K + P PP P L I AAGQKY Q +F YLGG++ E D+TR+IN R++ A C R++ E FDRP APLRLK RLL+AE MEALLYG +A
Sbjct: 122 CLEEGKTEAGGGGETPLDRVRRAVWGMLYADDAGVVSRSAEGLARMMTIIVEVFGEFGLTVSEKKTETLLMRAKDKPTTTSQ-PAPP-PPLTIEAAGQKYAQTTEFRYLGGLVNEHGDLTREINYRSRGAWACLRRYGREFFDRPQAPLRLKIRLLQAEAMEALLYGLFAGALA 293
BLAST of mRNA_F-serratus_M_contig1409.2952.1 vs. uniprot
Match: A0A6H5JFG6_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFG6_9PHAE) HSP 1 Score: 187 bits (476), Expect = 4.970e-53 Identity = 102/167 (61.08%), Postives = 117/167 (70.06%), Query Frame = -1
Query: 302 CLGFAGIHKDGPGETLLDRVRRAVWEMLYADDAGIVSRSPAGLARMRTVIVEIFGAFGLAVLEK*TETRLMRAPEKAQQPEETPTPPLPALGIAAAGQKYHQVHQFVYLGGIITEDADITRDINRRTKVARGCFRKFFTELFDRPSAPLRLKARLLKAEVMEALLYG 802
CL G ET LDRVRRAVW MLYADDAG+VSRS GLARM T+IVE+FG FGL V EK TET LMRA +K + P PP P L I AAGQKY Q +F YLGG++ E D+TR+IN R++ A C R++ ELFDRP AP RLK RLL+AE MEALLYG
Sbjct: 229 CLEEGKTEAGGGEETPLDRVRRAVWGMLYADDAGVVSRSAEGLARMMTIIVEVFGEFGLTVSEKKTETLLMRAKDKPTTTSQ-PAPP-PPLTIEAAGQKYAQTTEFRYLGGLVNEHGDLTREINYRSRGAWACLRRYGRELFDRPQAPFRLKIRLLQAEAMEALLYG 393
BLAST of mRNA_F-serratus_M_contig1409.2952.1 vs. uniprot
Match: A0A6H5JLT1_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLT1_9PHAE) HSP 1 Score: 191 bits (484), Expect = 1.040e-52 Identity = 104/186 (55.91%), Postives = 123/186 (66.13%), Query Frame = -1
Query: 245 CLGFAGIHKDGPGETLLDRVRRAVWEMLYADDAGIVSRSPAGLARMRTVIVEIFGAFGLAVLEK*TETRLMRAPEKAQQPEETPTPPLPALGIAAAGQKYHQVHQFVYLGGIITEDADITRDINRRTKVARGCFRKFFTELFDRPSAPLRLKARLLKAEVMEALLYGCMTAVVASGAIRVARPPSH 802
CL G ET LDRVRRAVW MLYADDAG+VSRS GLARM T+IVE+FG FGL V EK TET LMRA +K + +PP L I AAGQ+Y Q +F Y GG++ + D+TR+IN R++ A C R++ ELFDRP AP RLK RLL+AE MEALLYGCMT SG + R H
Sbjct: 238 CLEEGKTEAGGGEETPLDRVRRAVWGMLYADDAGVVSRSAEGLARMMTIIVEVFGEFGLTVSEKKTETLLMRAKDKPATTSQPASPP--PLTIEAAGQEYAQTTEFQYPGGLVNDHGDLTREINCRSRGAWACLRRYGRELFDRPKAPFRLKIRLLQAEAMEALLYGCMTWSPLSGHYQTLRSIHH 421
BLAST of mRNA_F-serratus_M_contig1409.2952.1 vs. uniprot
Match: A0A6H5KS82_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KS82_9PHAE) HSP 1 Score: 191 bits (486), Expect = 6.030e-52 Identity = 103/170 (60.59%), Postives = 118/170 (69.41%), Query Frame = -1
Query: 293 CLGFAGIHKDGPGETLLDRVRRAVWEMLYADDAGIVSRSPAGLARMRTVIVEIFGAFGLAVLEK*TETRLMRAPEKAQQPEETPTPPLPALGIAAAGQKYHQVHQFVYLGGIITEDADITRDINRRTKVARGCFRKFFTELFDRPSAPLRLKARLLKAEVMEALLYGCMT 802
CL G ET LDRVRRAVW M YADDAG+VSRS GLARM T+IVE+FG FGL V EK TET LMRA +K +T PP L I AAGQKY Q +F YLGG++ E D+TR+IN R++ A C R++ ELFDRP AP RLK RLL+AE MEALLYGCMT
Sbjct: 327 CLEEGKTEAGGGEETPLDRVRRAVWGMSYADDAGVVSRSAEGLARMMTIIVEVFGEFGLTVSEKKTETLLMRAKDKPTTISQTAPPP--PLTIKAAGQKYAQTTEFRYLGGLVNEHGDLTREINYRSRGAWACLRRYGRELFDRPQAPSRLKIRLLQAEAMEALLYGCMT 494
BLAST of mRNA_F-serratus_M_contig1409.2952.1 vs. uniprot
Match: A0A6H5K7X5_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7X5_9PHAE) HSP 1 Score: 186 bits (471), Expect = 7.600e-52 Identity = 96/162 (59.26%), Postives = 117/162 (72.22%), Query Frame = -1
Query: 293 KDGPGETLLDRVRRAVWEMLYADDAGIVSRSPAGLARMRTVIVEIFGAFGLAVLEK*TETRLMRAPEKAQQPEETPTPPLPALGIAAAGQKYHQVHQFVYLGGIITEDADITRDINRRTKVARGCFRKFFTELFDRPSAPLRLKARLLKAEVMEALLYGCMT 778
++G G TLLDRVRRAVW MLYADDAGIVS+S GLARM T+IVE+F FGL V E+ TET +MR E+ + L I AAGQ+Y Q +F YLGG++ E D+TR+IN R+K A C +++ TELFDRP AP RLKARLL+AE +EALLYGCMT
Sbjct: 239 EEGGGRTLLDRVRRAVWGMLYADDAGIVSKSADGLARMMTIIVEVFREFGLTVSERKTETLVMRVKERQRXXXXXXX----VLTIEAAGQRYAQTTEFRYLGGLVNEQGDLTREINHRSKAAWACIKRYATELFDRPGAPFRLKARLLQAEAVEALLYGCMT 396 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1409.2952.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig1409.2952.1 >prot_F-serratus_M_contig1409.2952.1 ID=prot_F-serratus_M_contig1409.2952.1|Name=mRNA_F-serratus_M_contig1409.2952.1|organism=Fucus serratus male|type=polypeptide|length=216bp MPGSSLSGFSPTIPGKHPLNTQVLGCEGGRATRMAPDATTAVMHPYSRASback to top mRNA from alignment at F-serratus_M_contig1409:148835..149786+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig1409.2952.1 ID=mRNA_F-serratus_M_contig1409.2952.1|Name=mRNA_F-serratus_M_contig1409.2952.1|organism=Fucus serratus male|type=mRNA|length=952bp|location=Sequence derived from alignment at F-serratus_M_contig1409:148835..149786+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig1409:148835..149786+ >mRNA_F-serratus_M_contig1409.2952.1 ID=mRNA_F-serratus_M_contig1409.2952.1|Name=mRNA_F-serratus_M_contig1409.2952.1|organism=Fucus serratus male|type=CDS|length=1296bp|location=Sequence derived from alignment at F-serratus_M_contig1409:148835..149786+ (Fucus serratus male)back to top |