prot_F-serratus_M_contig1408.2944.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_F-serratus_M_contig1408.2944.1
Unique Name	prot_F-serratus_M_contig1408.2944.1
Type	polypeptide
Organism	Fucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length	76

Homology

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BLAST of mRNA_F-serratus_M_contig1408.2944.1 vs. uniprot
Match: D6MQM8_9PHAE (Cytochrome c oxidase subunit 1 (Fragment) n=28 Tax=Phaeophyceae TaxID=2870 RepID=D6MQM8_9PHAE)

HSP 1 Score: 146 bits (368), Expect = 7.300e-43
Identity = 72/76 (94.74%), Postives = 74/76 (97.37%), Query Frame = 0

Query:    1 ILILPGFGIVSHILGTFSRKPIFGYLGMVYAMLSIGILGFIVWAHHMFTVGLDIDTRAYFTAATMIIAVPTGIEFF 76
            ILILPGFGIVSHIL TFSRKP+FGYLGMVYAMLSIGILGFIVWAHHMFTVGLDIDTRAYFTAATMIIAVPTGI+ F
Sbjct:    8 ILILPGFGIVSHILATFSRKPVFGYLGMVYAMLSIGILGFIVWAHHMFTVGLDIDTRAYFTAATMIIAVPTGIKIF 83

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BLAST of mRNA_F-serratus_M_contig1408.2944.1 vs. uniprot
Match: A0A060DDA6_9RHOD (Cytochrome c oxidase subunit 1 n=1 Tax=Pyropia fucicola TaxID=144551 RepID=A0A060DDA6_9RHOD)

HSP 1 Score: 141 bits (356), Expect = 6.730e-42
Identity = 66/76 (86.84%), Postives = 74/76 (97.37%), Query Frame = 0

Query:    1 ILILPGFGIVSHILGTFSRKPIFGYLGMVYAMLSIGILGFIVWAHHMFTVGLDIDTRAYFTAATMIIAVPTGIEFF 76
            +LILPGFGIVSHI+ TFSRKP+FGY+GM+YAMLSIGILGFIVWAHHM+TVGLD+DTRAYFTAATMIIAVPTGI+ F
Sbjct:   16 LLILPGFGIVSHIVSTFSRKPVFGYIGMIYAMLSIGILGFIVWAHHMYTVGLDVDTRAYFTAATMIIAVPTGIKIF 91

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BLAST of mRNA_F-serratus_M_contig1408.2944.1 vs. uniprot
Match: B7XCR5_CHAMQ (Cytochrome c oxidase subunit 1 (Fragment) n=7 Tax=Chattonella marina TaxID=90936 RepID=B7XCR5_CHAMQ)

HSP 1 Score: 141 bits (356), Expect = 1.780e-41
Identity = 67/76 (88.16%), Postives = 74/76 (97.37%), Query Frame = 0

Query:    1 ILILPGFGIVSHILGTFSRKPIFGYLGMVYAMLSIGILGFIVWAHHMFTVGLDIDTRAYFTAATMIIAVPTGIEFF 76
            ILILPGFGIVSHI+ TFS+KP+FGYLGMVYAM+SIG+LGFIVWAHHM+TVGLDIDTRAYFTAATMIIAVPTGI+ F
Sbjct:   13 ILILPGFGIVSHIVSTFSKKPVFGYLGMVYAMMSIGVLGFIVWAHHMYTVGLDIDTRAYFTAATMIIAVPTGIKIF 88

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BLAST of mRNA_F-serratus_M_contig1408.2944.1 vs. uniprot
Match: M1EYI5_9PHAE (Cytochrome c oxidase subunit 1 (Fragment) n=7 Tax=Fucales TaxID=3009 RepID=M1EYI5_9PHAE)

HSP 1 Score: 146 bits (368), Expect = 3.070e-41
Identity = 72/76 (94.74%), Postives = 74/76 (97.37%), Query Frame = 0

Query:    1 ILILPGFGIVSHILGTFSRKPIFGYLGMVYAMLSIGILGFIVWAHHMFTVGLDIDTRAYFTAATMIIAVPTGIEFF 76
            ILILPGFGIVSHIL TFSRKP+FGYLGMVYAMLSIGILGFIVWAHHMFTVGLDIDTRAYFTAATMIIAVPTGI+ F
Sbjct:  216 ILILPGFGIVSHILATFSRKPVFGYLGMVYAMLSIGILGFIVWAHHMFTVGLDIDTRAYFTAATMIIAVPTGIKIF 291

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BLAST of mRNA_F-serratus_M_contig1408.2944.1 vs. uniprot
Match: A0A060IEN7_9PHAE (Cytochrome c oxidase subunit 1 (Fragment) n=1 Tax=Halopteris filicina TaxID=117521 RepID=A0A060IEN7_9PHAE)

HSP 1 Score: 141 bits (355), Expect = 4.300e-41
Identity = 69/76 (90.79%), Postives = 73/76 (96.05%), Query Frame = 0

Query:    1 ILILPGFGIVSHILGTFSRKPIFGYLGMVYAMLSIGILGFIVWAHHMFTVGLDIDTRAYFTAATMIIAVPTGIEFF 76
            ILILPGFGIVSHIL  +S+KP+FGYLGMVYAMLSIGILGFIVWAHHMFTVGLDIDTRAYFTAATMIIAVPTGI+ F
Sbjct:    8 ILILPGFGIVSHILSHYSKKPVFGYLGMVYAMLSIGILGFIVWAHHMFTVGLDIDTRAYFTAATMIIAVPTGIKIF 83

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BLAST of mRNA_F-serratus_M_contig1408.2944.1 vs. uniprot
Match: A0A8J5WG91_ZIZPA (Uncharacterized protein n=1 Tax=Zizania palustris TaxID=103762 RepID=A0A8J5WG91_ZIZPA)

HSP 1 Score: 142 bits (358), Expect = 4.480e-41
Identity = 66/76 (86.84%), Postives = 74/76 (97.37%), Query Frame = 0

Query:    1 ILILPGFGIVSHILGTFSRKPIFGYLGMVYAMLSIGILGFIVWAHHMFTVGLDIDTRAYFTAATMIIAVPTGIEFF 76
            ILILPGFGI+SHI+ TFSRKP+FGYLGMVYAM+SIG+LGF+VWAHHMFTVGLD+DTRAYFTAATMIIAVPTGI+ F
Sbjct:   41 ILILPGFGIISHIVSTFSRKPVFGYLGMVYAMISIGVLGFLVWAHHMFTVGLDVDTRAYFTAATMIIAVPTGIKIF 116

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BLAST of mRNA_F-serratus_M_contig1408.2944.1 vs. uniprot
Match: A0A6M3TIB1_9FLOR (Cytochrome c oxidase subunit 1 (Fragment) n=1 Tax=Sebdenia monnardiana TaxID=2651872 RepID=A0A6M3TIB1_9FLOR)

HSP 1 Score: 140 bits (352), Expect = 4.870e-41
Identity = 64/76 (84.21%), Postives = 74/76 (97.37%), Query Frame = 0

Query:    1 ILILPGFGIVSHILGTFSRKPIFGYLGMVYAMLSIGILGFIVWAHHMFTVGLDIDTRAYFTAATMIIAVPTGIEFF 76
            IL+LPGFG++SHI+ TFSRKP+FGY+GMVYAM+SIGILGFIVWAHHM+TVGLD+DTRAYFTAATMIIAVPTGI+ F
Sbjct:    7 ILVLPGFGMISHIVSTFSRKPVFGYIGMVYAMISIGILGFIVWAHHMYTVGLDVDTRAYFTAATMIIAVPTGIKIF 82

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BLAST of mRNA_F-serratus_M_contig1408.2944.1 vs. uniprot
Match: A0A7G1K7S9_9PHAE (Cytochrome c oxidase subunit 1 (Fragment) n=2 Tax=Mutimo cylindricus TaxID=1948892 RepID=A0A7G1K7S9_9PHAE)

HSP 1 Score: 140 bits (353), Expect = 5.720e-41
Identity = 68/72 (94.44%), Postives = 71/72 (98.61%), Query Frame = 0

Query:    1 ILILPGFGIVSHILGTFSRKPIFGYLGMVYAMLSIGILGFIVWAHHMFTVGLDIDTRAYFTAATMIIAVPTG 72
            I+ILPGFGIVSHIL TFSRKP+FGYLGMVYAMLSIGILGFIVWAHHMFTVGLDIDTRAYFT+ATMIIAVPTG
Sbjct:   95 IIILPGFGIVSHILSTFSRKPVFGYLGMVYAMLSIGILGFIVWAHHMFTVGLDIDTRAYFTSATMIIAVPTG 166

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BLAST of mRNA_F-serratus_M_contig1408.2944.1 vs. uniprot
Match: M1F017_SARFS (Cytochrome c oxidase subunit 1 (Fragment) n=4 Tax=Fucales TaxID=3009 RepID=M1F017_SARFS)

HSP 1 Score: 146 bits (368), Expect = 7.570e-41
Identity = 72/76 (94.74%), Postives = 74/76 (97.37%), Query Frame = 0

Query:    1 ILILPGFGIVSHILGTFSRKPIFGYLGMVYAMLSIGILGFIVWAHHMFTVGLDIDTRAYFTAATMIIAVPTGIEFF 76
            ILILPGFGIVSHIL TFSRKP+FGYLGMVYAMLSIGILGFIVWAHHMFTVGLDIDTRAYFTAATMIIAVPTGI+ F
Sbjct:  216 ILILPGFGIVSHILATFSRKPVFGYLGMVYAMLSIGILGFIVWAHHMFTVGLDIDTRAYFTAATMIIAVPTGIKIF 291

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BLAST of mRNA_F-serratus_M_contig1408.2944.1 vs. uniprot
Match: G4Y942_9SOLA (Cytochrome c oxidase subunit 1 (Fragment) n=1 Tax=Mandragora sp. Kew23330 TaxID=1035553 RepID=G4Y942_9SOLA)

HSP 1 Score: 139 bits (351), Expect = 8.040e-41
Identity = 65/76 (85.53%), Postives = 73/76 (96.05%), Query Frame = 0

Query:    1 ILILPGFGIVSHILGTFSRKPIFGYLGMVYAMLSIGILGFIVWAHHMFTVGLDIDTRAYFTAATMIIAVPTGIEFF 76
            ILILPGFGI+SHI+ TFS KP+FGYLGMVYAM+SIG+LGF+VWAHHMFTVGLD+DTRAYFTAATMIIAVPTGI+ F
Sbjct:    6 ILILPGFGIISHIVSTFSGKPVFGYLGMVYAMISIGVLGFLVWAHHMFTVGLDVDTRAYFTAATMIIAVPTGIKIF 81

The following BLAST results are available for this feature:

BLAST of mRNA_F-serratus_M_contig1408.2944.1 vs. uniprot

BLAST of mRNA_F-serratus_M_contig1408.2944.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D6MQM8_9PHAE	7.300e-43	94.74	Cytochrome c oxidase subunit 1 (Fragment) n=28 Tax...	[more]
A0A060DDA6_9RHOD	6.730e-42	86.84	Cytochrome c oxidase subunit 1 n=1 Tax=Pyropia fuc...	[more]
B7XCR5_CHAMQ	1.780e-41	88.16	Cytochrome c oxidase subunit 1 (Fragment) n=7 Tax=...	[more]
M1EYI5_9PHAE	3.070e-41	94.74	Cytochrome c oxidase subunit 1 (Fragment) n=7 Tax=...	[more]
A0A060IEN7_9PHAE	4.300e-41	90.79	Cytochrome c oxidase subunit 1 (Fragment) n=1 Tax=...	[more]
A0A8J5WG91_ZIZPA	4.480e-41	86.84	Uncharacterized protein n=1 Tax=Zizania palustris ...	[more]
A0A6M3TIB1_9FLOR	4.870e-41	84.21	Cytochrome c oxidase subunit 1 (Fragment) n=1 Tax=...	[more]
A0A7G1K7S9_9PHAE	5.720e-41	94.44	Cytochrome c oxidase subunit 1 (Fragment) n=2 Tax=...	[more]
M1F017_SARFS	7.570e-41	94.74	Cytochrome c oxidase subunit 1 (Fragment) n=4 Tax=...	[more]
G4Y942_9SOLA	8.040e-41	85.53	Cytochrome c oxidase subunit 1 (Fragment) n=1 Tax=...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000883	Cytochrome c oxidase subunit I	PRINTS	PR01165	CYCOXIDASEI	coord: 60..76 score: 57.24 coord: 36..51 score: 84.78
IPR000883	Cytochrome c oxidase subunit I	PFAM	PF00115	COX1	coord: 1..76 e-value: 6.3E-23 score: 81.3
IPR000883	Cytochrome c oxidase subunit I	PANTHER	PTHR10422	CYTOCHROME C OXIDASE SUBUNIT 1	coord: 1..76
IPR036927	Cytochrome c oxidase-like, subunit I superfamily	GENE3D	1.20.210.10		coord: 1..76 e-value: 9.4E-33 score: 115.3
IPR036927	Cytochrome c oxidase-like, subunit I superfamily	SUPERFAMILY	81442	Cytochrome c oxidase subunit I-like	coord: 1..76
None	No IPR available	PANTHER	PTHR10422:SF18	CYTOCHROME C OXIDASE SUBUNIT 1	coord: 1..76
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 45..55
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 74..76
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..21
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 56..73
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 22..44
None	No IPR available	TMHMM	TMhelix		coord: 58..75
None	No IPR available	TMHMM	TMhelix		coord: 21..43
IPR023616	Cytochrome c oxidase-like, subunit I domain	PROSITE	PS50855	COX1	coord: 1..76 score: 22.045

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
F-serratus_M_contig1408	contig	F-serratus_M_contig1408:194182..194409 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Fucus serratus MALE	2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90	2022-09-16
OGS1.0 of Fucus serratus male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_F-serratus_M_contig1408.2944.1	mRNA_F-serratus_M_contig1408.2944.1	Fucus serratus male	mRNA	F-serratus_M_contig1408 194182..194409 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_F-serratus_M_contig1408.2944.1 ID=prot_F-serratus_M_contig1408.2944.1|Name=mRNA_F-serratus_M_contig1408.2944.1|organism=Fucus serratus male|type=polypeptide|length=76bp
ILILPGFGIVSHILGTFSRKPIFGYLGMVYAMLSIGILGFIVWAHHMFTV
GLDIDTRAYFTAATMIIAVPTGIEFF

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR000883	Cyt_C_Oxase_1
IPR036927	Cyt_c_oxase-like_su1_sf
IPR023616	Cyt_c_oxase-like_su1_dom