prot_F-serratus_M_contig1408.2942.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig1408.2942.1
Unique Nameprot_F-serratus_M_contig1408.2942.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length291
Homology
BLAST of mRNA_F-serratus_M_contig1408.2942.1 vs. uniprot
Match: D8LFP8_ECTSI (Similar to peptide-N(4)-(N-acetyl-beta-glucosaminyl)asparagine amidase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LFP8_ECTSI)

HSP 1 Score: 285 bits (730), Expect = 1.170e-93
Identity = 145/208 (69.71%), Postives = 172/208 (82.69%), Query Frame = 0
Query:    1 MATSTVQERRKRLVNRVGRHLPCNTVLAVSEFGKISDKIVGNILTNPGDVKFRELRVNNKIIQRAVLSCHGGGEFLSLLGFEKIKKHGEFFYFMSEPELDHLTQARDWLKDRVKACEASAEASSGRVCADTVLTIHLTSGQTLDGGFYAHETVSDVYGFLQSSVVSGAVEDLRL-SIMAPARILGEEMLAVSLADAKLVPKASLAVIK 207
            MATS +QERRKRLVNRVGRHLPCNT+  VS+F K++ K+V NIL+NP DVKFRELR NNK IQRAVLSCHGG EFLSLLGFEKI K+GE  YF++EP +DHLTQA+ WL +RVK+CE S  +  GR CAD+VLT+ LTSGQTL+GGFY HET+ DVY FLQSSVV+G  EDLRL +   P   LGE+ML +SLADAKL+P+A+LAV+K
Sbjct:    1 MATSALQERRKRLVNRVGRHLPCNTIQVVSDFAKVATKVVENILSNPADVKFRELRANNKTIQRAVLSCHGGREFLSLLGFEKITKNGEVVYFLAEPHVDHLTQAKGWLAERVKSCEQSEGSVGGRACADSVLTVLLTSGQTLEGGFYKHETIHDVYAFLQSSVVNGG-EDLRLRTTTVPETELGEQMLPMSLADAKLLPRATLAVVK 207          
BLAST of mRNA_F-serratus_M_contig1408.2942.1 vs. uniprot
Match: A0A835ZG04_9STRA (UBX domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZG04_9STRA)

HSP 1 Score: 189 bits (480), Expect = 3.840e-55
Identity = 127/298 (42.62%), Postives = 176/298 (59.06%), Query Frame = 0
Query:    1 MATSTVQERRKRLVNRVGRHLPCNTVLAVSEFGKISDKIVGNILTNPGDVKFRELRVNNKIIQRAVLSCHGGGEFLSLLGFEKIKKHGEFFYFMSEPELDHLTQARDWLKDRVKACEASA--EASSGRVCADTVLTIHLTSGQTLDGGFYAHETVSDVYGFLQSSVVSGAVEDLRLSIMAPAR-ILGEEMLAVSLADAKLVPKASLAVIKSPIATTPTLTPASSSQPS---RKNDSEQDAKEQLRLLKEYSVRKSRDTAAEKEKEDAMAKFRADRVALASK------PQEDNGVEETK 286
            M TS VQE+R+RL+ RVGRH+PCN   AV  F   + K++ NI+  P + K+RELR  N  +   +L  HGG EFL LLGFEKI KHGE  YFM+E +L++LTQA+ WL+ +  A  A A  E    + CA+ V+ + LTSGQTL+GGFYAHETV  VY F++SSVV+    +  L + AP       + L ++L DA L P+A L V+KS     P    A+ +      R    E++A EQLR++KE  +++    A + EK   +++F+ DR   A +         D G EETK
Sbjct:    1 MVTSDVQEKRRRLLVRVGRHIPCNAPEAVRVFLDAASKMLDNIMKAPEEPKYRELRAANAAVSAKLLQPHGGKEFLHLLGFEKIFKHGEAVYFMTEVDLEYLTQAKQWLQQQAAAAMAMAPAEVPGAQACAECVIQVRLTSGQTLEGGFYAHETVRAVYDFVRSSVVNA---EEALLLRAPGHHSFTADKLDMTLQDAGLAPRAVLQVVKSG----PEEGGAAEAMEEARRRARQQEREAHEQLRMIKETKMKEQ--VARDAEKARILSEFKHDREKTAHQGGLMVADTADQGFEETK 289          
BLAST of mRNA_F-serratus_M_contig1408.2942.1 vs. uniprot
Match: A0A2P2KFF2_RHIMU (UBA domain-containing protein n=4 Tax=Rhizophora mucronata TaxID=61149 RepID=A0A2P2KFF2_RHIMU)

HSP 1 Score: 60.8 bits (146), Expect = 7.490e-7
Identity = 30/61 (49.18%), Postives = 42/61 (68.85%), Query Frame = 0
Query:   40 VGNILTNPGDVKFRELRVNNKIIQRAVLSCHGGGEFLSLLGFEKIKKHGEFFYFMSEPELD 100
            +GN+  NPG+ KFR++R+NN+  Q  V S  GG EFL L GFEKI+  G+ F F+S  ++D
Sbjct:  332 IGNVAKNPGEEKFRKIRLNNQAFQDRVGSLKGGIEFLELCGFEKIE--GDEFLFLSRDKVD 390          
BLAST of mRNA_F-serratus_M_contig1408.2942.1 vs. uniprot
Match: B9IJJ3_POPTR (UBA domain-containing protein n=8 Tax=Saliceae TaxID=238069 RepID=B9IJJ3_POPTR)

HSP 1 Score: 57.8 bits (138), Expect = 7.800e-6
Identity = 28/61 (45.90%), Postives = 41/61 (67.21%), Query Frame = 0
Query:   40 VGNILTNPGDVKFRELRVNNKIIQRAVLSCHGGGEFLSLLGFEKIKKHGEFFYFMSEPELD 100
            VGN+  NPG+ KFR++R+NN+  Q  V S  GG  FL L GFEKI+   + F+F++  ++D
Sbjct:  333 VGNVAKNPGEEKFRKIRLNNQTFQDRVGSLEGGIRFLELCGFEKIES--DEFFFLARDKVD 391          
BLAST of mRNA_F-serratus_M_contig1408.2942.1 vs. uniprot
Match: A0A6M2EL12_9ROSI (UBA domain-containing protein n=4 Tax=Populus TaxID=3689 RepID=A0A6M2EL12_9ROSI)

HSP 1 Score: 57.8 bits (138), Expect = 7.800e-6
Identity = 28/61 (45.90%), Postives = 41/61 (67.21%), Query Frame = 0
Query:   40 VGNILTNPGDVKFRELRVNNKIIQRAVLSCHGGGEFLSLLGFEKIKKHGEFFYFMSEPELD 100
            VGN+  NPG+ KFR++R+NN+  Q  V S  GG  FL L GFEKI+   + F+F++  ++D
Sbjct:  333 VGNVAKNPGEEKFRKIRLNNQTFQDRVGSLEGGIRFLELCGFEKIES--DEFFFLARDKVD 391          
BLAST of mRNA_F-serratus_M_contig1408.2942.1 vs. uniprot
Match: A0A7S4M1Z1_9EUKA (Hypothetical protein n=1 Tax=Prymnesium polylepis TaxID=72548 RepID=A0A7S4M1Z1_9EUKA)

HSP 1 Score: 53.5 bits (127), Expect = 1.270e-5
Identity = 30/73 (41.10%), Postives = 40/73 (54.79%), Query Frame = 0
Query:   38 KIVGNILTNPGDVKFRELRVNNKIIQRAVLSCHGGGEFLSLLGFEKIK----KHGEFFYFMSEPELDHLTQAR 106
            K+VGNIL +P + K+R L+V NK I+  VLSC GG   L  +GFE  +       E     ++ EL  L Q R
Sbjct:   20 KVVGNILADPAEPKYRTLKVENKTIKEKVLSCPGGRALLLSVGFEAQQVGEIARPELLVLPADAELSELGQMR 92          
BLAST of mRNA_F-serratus_M_contig1408.2942.1 vs. uniprot
Match: A0A1S3DHW4_DIACI (UBX domain-containing protein 6-like n=1 Tax=Diaphorina citri TaxID=121845 RepID=A0A1S3DHW4_DIACI)

HSP 1 Score: 55.1 bits (131), Expect = 5.290e-5
Identity = 33/96 (34.38%), Postives = 52/96 (54.17%), Query Frame = 0
Query:   38 KIVGNILTNPGDVKFRELRVNNKIIQRAVLSCHGGGEFLSLLGFEKIKKHGEFFYFMSEPELDHLTQARDWLKDRVKACEASAEA--SSGRVCADT 131
            K + NIL NPG+ K+R++R++N+I Q  V    G  EFL   GF++++  GE +   SE   +      + L D + +CE  A +   + RV A T
Sbjct:  191 KYLKNILQNPGEEKYRKIRLSNRIFQERVACMEGALEFLRACGFQELELDGEAYLVFSEENREGAMDL-EVLMDALHSCEPLALSVDRNARVLAST 285          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1408.2942.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
D8LFP8_ECTSI1.170e-9369.71Similar to peptide-N(4)-(N-acetyl-beta-glucosaminy... [more]
A0A835ZG04_9STRA3.840e-5542.62UBX domain-containing protein n=1 Tax=Tribonema mi... [more]
A0A2P2KFF2_RHIMU7.490e-749.18UBA domain-containing protein n=4 Tax=Rhizophora m... [more]
B9IJJ3_POPTR7.800e-645.90UBA domain-containing protein n=8 Tax=Saliceae Tax... [more]
A0A6M2EL12_9ROSI7.800e-645.90UBA domain-containing protein n=4 Tax=Populus TaxI... [more]
A0A7S4M1Z1_9EUKA1.270e-541.10Hypothetical protein n=1 Tax=Prymnesium polylepis ... [more]
A0A1S3DHW4_DIACI5.290e-534.38UBX domain-containing protein 6-like n=1 Tax=Diaph... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR018997PUB domainSMARTSM00580PGNneucoord: 33..96
e-value: 1.2E-4
score: 31.5
IPR018997PUB domainPFAMPF09409PUBcoord: 37..105
e-value: 7.9E-16
score: 57.8
IPR001012UBX domainPFAMPF00789UBXcoord: 130..205
e-value: 4.3E-5
score: 23.6
IPR001012UBX domainPROSITEPS50033UBXcoord: 131..205
score: 9.986
NoneNo IPR availableGENE3D3.10.20.90coord: 125..207
e-value: 1.6E-9
score: 39.7
NoneNo IPR availableGENE3D1.20.58.2190coord: 21..112
e-value: 2.7E-17
score: 64.2
NoneNo IPR availablePANTHERPTHR23153UBX-RELATEDcoord: 37..110
IPR036339PUB-like domain superfamilySUPERFAMILY143503PUG domain-likecoord: 23..112
IPR029071Ubiquitin-like domain superfamilySUPERFAMILY54236Ubiquitin-likecoord: 129..206

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1408contigF-serratus_M_contig1408:131434..140339 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1408.2942.1mRNA_F-serratus_M_contig1408.2942.1Fucus serratus malemRNAF-serratus_M_contig1408 130696..140339 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig1408.2942.1 ID=prot_F-serratus_M_contig1408.2942.1|Name=mRNA_F-serratus_M_contig1408.2942.1|organism=Fucus serratus male|type=polypeptide|length=291bp
MATSTVQERRKRLVNRVGRHLPCNTVLAVSEFGKISDKIVGNILTNPGDV
KFRELRVNNKIIQRAVLSCHGGGEFLSLLGFEKIKKHGEFFYFMSEPELD
HLTQARDWLKDRVKACEASAEASSGRVCADTVLTIHLTSGQTLDGGFYAH
ETVSDVYGFLQSSVVSGAVEDLRLSIMAPARILGEEMLAVSLADAKLVPK
ASLAVIKSPIATTPTLTPASSSQPSRKNDSEQDAKEQLRLLKEYSVRKSR
DTAAEKEKEDAMAKFRADRVALASKPQEDNGVEETKGDRR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR018997PUB_domain
IPR001012UBX_dom
IPR036339PUB-like_dom_sf
IPR029071Ubiquitin-like_domsf