mRNA_F-serratus_M_contig1408.2942.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig1408.2942.1
Unique NamemRNA_F-serratus_M_contig1408.2942.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
BLAST of mRNA_F-serratus_M_contig1408.2942.1 vs. uniprot
Match: D8LFP8_ECTSI (Similar to peptide-N(4)-(N-acetyl-beta-glucosaminyl)asparagine amidase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LFP8_ECTSI)

HSP 1 Score: 285 bits (730), Expect = 3.350e-90
Identity = 145/208 (69.71%), Postives = 172/208 (82.69%), Query Frame = 1
Query:    1 MATSTVQERRKRLVNRVGRHLPCNTVLAVSEFGKISDKIVGNILTNPGDVKFRELRVNNKIIQRAVLSCHGGGEFLSLLGFEKIKKHGEFFYFMSEPELDHLTQARDWLKDRVKACEASAEASSGRVCADTVLTIHLTSGQTLDGGFYAHETVSDVYGFLQSSVVSGAVEDLRL-SIMAPARILGEEMLAVSLADAKLVPKASLAVIK 621
            MATS +QERRKRLVNRVGRHLPCNT+  VS+F K++ K+V NIL+NP DVKFRELR NNK IQRAVLSCHGG EFLSLLGFEKI K+GE  YF++EP +DHLTQA+ WL +RVK+CE S  +  GR CAD+VLT+ LTSGQTL+GGFY HET+ DVY FLQSSVV+G  EDLRL +   P   LGE+ML +SLADAKL+P+A+LAV+K
Sbjct:    1 MATSALQERRKRLVNRVGRHLPCNTIQVVSDFAKVATKVVENILSNPADVKFRELRANNKTIQRAVLSCHGGREFLSLLGFEKITKNGEVVYFLAEPHVDHLTQAKGWLAERVKSCEQSEGSVGGRACADSVLTVLLTSGQTLEGGFYKHETIHDVYAFLQSSVVNGG-EDLRLRTTTVPETELGEQMLPMSLADAKLLPRATLAVVK 207          
BLAST of mRNA_F-serratus_M_contig1408.2942.1 vs. uniprot
Match: A0A835ZG04_9STRA (UBX domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZG04_9STRA)

HSP 1 Score: 189 bits (480), Expect = 2.350e-52
Identity = 127/298 (42.62%), Postives = 176/298 (59.06%), Query Frame = 1
Query:    1 MATSTVQERRKRLVNRVGRHLPCNTVLAVSEFGKISDKIVGNILTNPGDVKFRELRVNNKIIQRAVLSCHGGGEFLSLLGFEKIKKHGEFFYFMSEPELDHLTQARDWLKDRVKACEASA--EASSGRVCADTVLTIHLTSGQTLDGGFYAHETVSDVYGFLQSSVVSGAVEDLRLSIMAPAR-ILGEEMLAVSLADAKLVPKASLAVIKSPIATTPTLTPASSSQPS---RKNDSEQDAKEQLRLLKEYSVRKSRDTAAEKEKEDAMAKFRADRVALASK------PQEDNGVEETK 858
            M TS VQE+R+RL+ RVGRH+PCN   AV  F   + K++ NI+  P + K+RELR  N  +   +L  HGG EFL LLGFEKI KHGE  YFM+E +L++LTQA+ WL+ +  A  A A  E    + CA+ V+ + LTSGQTL+GGFYAHETV  VY F++SSVV+    +  L + AP       + L ++L DA L P+A L V+KS     P    A+ +      R    E++A EQLR++KE  +++    A + EK   +++F+ DR   A +         D G EETK
Sbjct:    1 MVTSDVQEKRRRLLVRVGRHIPCNAPEAVRVFLDAASKMLDNIMKAPEEPKYRELRAANAAVSAKLLQPHGGKEFLHLLGFEKIFKHGEAVYFMTEVDLEYLTQAKQWLQQQAAAAMAMAPAEVPGAQACAECVIQVRLTSGQTLEGGFYAHETVRAVYDFVRSSVVNA---EEALLLRAPGHHSFTADKLDMTLQDAGLAPRAVLQVVKSG----PEEGGAAEAMEEARRRARQQEREAHEQLRMIKETKMKEQ--VARDAEKARILSEFKHDREKTAHQGGLMVADTADQGFEETK 289          
BLAST of mRNA_F-serratus_M_contig1408.2942.1 vs. uniprot
Match: A0A2P2KFF2_RHIMU (UBA domain-containing protein n=4 Tax=Rhizophora mucronata TaxID=61149 RepID=A0A2P2KFF2_RHIMU)

HSP 1 Score: 60.8 bits (146), Expect = 3.110e-6
Identity = 30/61 (49.18%), Postives = 42/61 (68.85%), Query Frame = 1
Query:  118 VGNILTNPGDVKFRELRVNNKIIQRAVLSCHGGGEFLSLLGFEKIKKHGEFFYFMSEPELD 300
            +GN+  NPG+ KFR++R+NN+  Q  V S  GG EFL L GFEKI+  G+ F F+S  ++D
Sbjct:  332 IGNVAKNPGEEKFRKIRLNNQAFQDRVGSLKGGIEFLELCGFEKIE--GDEFLFLSRDKVD 390          
BLAST of mRNA_F-serratus_M_contig1408.2942.1 vs. uniprot
Match: A0A7S4M1Z1_9EUKA (Hypothetical protein n=1 Tax=Prymnesium polylepis TaxID=72548 RepID=A0A7S4M1Z1_9EUKA)

HSP 1 Score: 53.5 bits (127), Expect = 2.760e-5
Identity = 30/73 (41.10%), Postives = 40/73 (54.79%), Query Frame = 1
Query:  112 KIVGNILTNPGDVKFRELRVNNKIIQRAVLSCHGGGEFLSLLGFEKIK----KHGEFFYFMSEPELDHLTQAR 318
            K+VGNIL +P + K+R L+V NK I+  VLSC GG   L  +GFE  +       E     ++ EL  L Q R
Sbjct:   20 KVVGNILADPAEPKYRTLKVENKTIKEKVLSCPGGRALLLSVGFEAQQVGEIARPELLVLPADAELSELGQMR 92          
BLAST of mRNA_F-serratus_M_contig1408.2942.1 vs. uniprot
Match: B9IJJ3_POPTR (UBA domain-containing protein n=8 Tax=Saliceae TaxID=238069 RepID=B9IJJ3_POPTR)

HSP 1 Score: 57.8 bits (138), Expect = 2.980e-5
Identity = 28/61 (45.90%), Postives = 41/61 (67.21%), Query Frame = 1
Query:  118 VGNILTNPGDVKFRELRVNNKIIQRAVLSCHGGGEFLSLLGFEKIKKHGEFFYFMSEPELD 300
            VGN+  NPG+ KFR++R+NN+  Q  V S  GG  FL L GFEKI+   + F+F++  ++D
Sbjct:  333 VGNVAKNPGEEKFRKIRLNNQTFQDRVGSLEGGIRFLELCGFEKIES--DEFFFLARDKVD 391          
BLAST of mRNA_F-serratus_M_contig1408.2942.1 vs. uniprot
Match: A0A6M2EL12_9ROSI (UBA domain-containing protein n=4 Tax=Populus TaxID=3689 RepID=A0A6M2EL12_9ROSI)

HSP 1 Score: 57.8 bits (138), Expect = 2.980e-5
Identity = 28/61 (45.90%), Postives = 41/61 (67.21%), Query Frame = 1
Query:  118 VGNILTNPGDVKFRELRVNNKIIQRAVLSCHGGGEFLSLLGFEKIKKHGEFFYFMSEPELD 300
            VGN+  NPG+ KFR++R+NN+  Q  V S  GG  FL L GFEKI+   + F+F++  ++D
Sbjct:  333 VGNVAKNPGEEKFRKIRLNNQTFQDRVGSLEGGIRFLELCGFEKIES--DEFFFLARDKVD 391          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1408.2942.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
D8LFP8_ECTSI3.350e-9069.71Similar to peptide-N(4)-(N-acetyl-beta-glucosaminy... [more]
A0A835ZG04_9STRA2.350e-5242.62UBX domain-containing protein n=1 Tax=Tribonema mi... [more]
A0A2P2KFF2_RHIMU3.110e-649.18UBA domain-containing protein n=4 Tax=Rhizophora m... [more]
A0A7S4M1Z1_9EUKA2.760e-541.10Hypothetical protein n=1 Tax=Prymnesium polylepis ... [more]
B9IJJ3_POPTR2.980e-545.90UBA domain-containing protein n=8 Tax=Saliceae Tax... [more]
A0A6M2EL12_9ROSI2.980e-545.90UBA domain-containing protein n=4 Tax=Populus TaxI... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1408contigF-serratus_M_contig1408:130696..140339 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionUBX domain
Ec32 orthologEc-01_001370.1
Exons9
Model size1611
Cds size873
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1408.2942.1prot_F-serratus_M_contig1408.2942.1Fucus serratus malepolypeptideF-serratus_M_contig1408 131434..140339 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929390.0898378-UTR-F-serratus_M_contig1408:130695..1314331622929390.0898378-UTR-F-serratus_M_contig1408:130695..131433Fucus serratus maleUTRF-serratus_M_contig1408 130696..131433 -
1690962830.3066626-UTR-F-serratus_M_contig1408:130695..1314331690962830.3066626-UTR-F-serratus_M_contig1408:130695..131433Fucus serratus maleUTRF-serratus_M_contig1408 130696..131433 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929390.1033483-CDS-F-serratus_M_contig1408:131433..1314561622929390.1033483-CDS-F-serratus_M_contig1408:131433..131456Fucus serratus maleCDSF-serratus_M_contig1408 131434..131456 -
1690962830.3236172-CDS-F-serratus_M_contig1408:131433..1314561690962830.3236172-CDS-F-serratus_M_contig1408:131433..131456Fucus serratus maleCDSF-serratus_M_contig1408 131434..131456 -
1622929390.1123016-CDS-F-serratus_M_contig1408:131755..1318371622929390.1123016-CDS-F-serratus_M_contig1408:131755..131837Fucus serratus maleCDSF-serratus_M_contig1408 131756..131837 -
1690962830.339037-CDS-F-serratus_M_contig1408:131755..1318371690962830.339037-CDS-F-serratus_M_contig1408:131755..131837Fucus serratus maleCDSF-serratus_M_contig1408 131756..131837 -
1622929390.1212797-CDS-F-serratus_M_contig1408:132286..1323581622929390.1212797-CDS-F-serratus_M_contig1408:132286..132358Fucus serratus maleCDSF-serratus_M_contig1408 132287..132358 -
1690962830.349247-CDS-F-serratus_M_contig1408:132286..1323581690962830.349247-CDS-F-serratus_M_contig1408:132286..132358Fucus serratus maleCDSF-serratus_M_contig1408 132287..132358 -
1622929390.132172-CDS-F-serratus_M_contig1408:132859..1329691622929390.132172-CDS-F-serratus_M_contig1408:132859..132969Fucus serratus maleCDSF-serratus_M_contig1408 132860..132969 -
1690962830.358626-CDS-F-serratus_M_contig1408:132859..1329691690962830.358626-CDS-F-serratus_M_contig1408:132859..132969Fucus serratus maleCDSF-serratus_M_contig1408 132860..132969 -
1622929390.1464355-CDS-F-serratus_M_contig1408:133352..1334351622929390.1464355-CDS-F-serratus_M_contig1408:133352..133435Fucus serratus maleCDSF-serratus_M_contig1408 133353..133435 -
1690962830.3666298-CDS-F-serratus_M_contig1408:133352..1334351690962830.3666298-CDS-F-serratus_M_contig1408:133352..133435Fucus serratus maleCDSF-serratus_M_contig1408 133353..133435 -
1622929390.1580038-CDS-F-serratus_M_contig1408:133720..1338211622929390.1580038-CDS-F-serratus_M_contig1408:133720..133821Fucus serratus maleCDSF-serratus_M_contig1408 133721..133821 -
1690962830.3757207-CDS-F-serratus_M_contig1408:133720..1338211690962830.3757207-CDS-F-serratus_M_contig1408:133720..133821Fucus serratus maleCDSF-serratus_M_contig1408 133721..133821 -
1622929390.1700454-CDS-F-serratus_M_contig1408:134170..1343241622929390.1700454-CDS-F-serratus_M_contig1408:134170..134324Fucus serratus maleCDSF-serratus_M_contig1408 134171..134324 -
1690962830.3839884-CDS-F-serratus_M_contig1408:134170..1343241690962830.3839884-CDS-F-serratus_M_contig1408:134170..134324Fucus serratus maleCDSF-serratus_M_contig1408 134171..134324 -
1622929390.1864905-CDS-F-serratus_M_contig1408:134695..1348291622929390.1864905-CDS-F-serratus_M_contig1408:134695..134829Fucus serratus maleCDSF-serratus_M_contig1408 134696..134829 -
1690962830.3932333-CDS-F-serratus_M_contig1408:134695..1348291690962830.3932333-CDS-F-serratus_M_contig1408:134695..134829Fucus serratus maleCDSF-serratus_M_contig1408 134696..134829 -
1622929390.1956918-CDS-F-serratus_M_contig1408:140225..1403391622929390.1956918-CDS-F-serratus_M_contig1408:140225..140339Fucus serratus maleCDSF-serratus_M_contig1408 140226..140339 -
1690962830.4019217-CDS-F-serratus_M_contig1408:140225..1403391690962830.4019217-CDS-F-serratus_M_contig1408:140225..140339Fucus serratus maleCDSF-serratus_M_contig1408 140226..140339 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig1408.2942.1

>prot_F-serratus_M_contig1408.2942.1 ID=prot_F-serratus_M_contig1408.2942.1|Name=mRNA_F-serratus_M_contig1408.2942.1|organism=Fucus serratus male|type=polypeptide|length=291bp
MATSTVQERRKRLVNRVGRHLPCNTVLAVSEFGKISDKIVGNILTNPGDV
KFRELRVNNKIIQRAVLSCHGGGEFLSLLGFEKIKKHGEFFYFMSEPELD
HLTQARDWLKDRVKACEASAEASSGRVCADTVLTIHLTSGQTLDGGFYAH
ETVSDVYGFLQSSVVSGAVEDLRLSIMAPARILGEEMLAVSLADAKLVPK
ASLAVIKSPIATTPTLTPASSSQPSRKNDSEQDAKEQLRLLKEYSVRKSR
DTAAEKEKEDAMAKFRADRVALASKPQEDNGVEETKGDRR*
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mRNA from alignment at F-serratus_M_contig1408:130696..140339-

Legend: polypeptideCDSUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig1408.2942.1 ID=mRNA_F-serratus_M_contig1408.2942.1|Name=mRNA_F-serratus_M_contig1408.2942.1|organism=Fucus serratus male|type=mRNA|length=9644bp|location=Sequence derived from alignment at F-serratus_M_contig1408:130696..140339- (Fucus serratus male)
ATGGCAACCTCAACAGTTCAGGAAAGAAGAAAGCGTCTGGTCAATCGAGT TGGTCGCCACCTTCCGTGTAACACTGTGCTTGCAGTCTCCGAGTTCGGTA AAATCTCAGACAAGGTGAGGTGCAGTAAAGTATGATTCCCTTTCCCCCCA CGTAGGGTACTCGAGCGTATACCGTACCGCGAGAGCGGGCAGCGACTTTC CAGGATTCCATCTCAAAAGAGGAGGCTGCAGAGTGTTGGTAGAGATACTA TGAAAAAAATATGTAAACATCAGGAACAGGCTTCGTGTGACCAGTTGTTT GGCGTAAGACTATAGCATCTGCCCCTATGCAATGATTGCAGTCGCAGAAA TGGGTACAAGGACTTCGGGGTATCTCAGTTCCACCGCCTCCTCAAGGAGT CACGGCGGTAGGTTGCGATACAGCCACCGTGAGTGTCTTGAACTGTAAGA GGGAATCAATACGGCCGTACGCCTTCTCAATGGCTCGGATCGACGCAGTT TTCAGCTTTAGCTTTGGCCAACCTATGTCCACGGCAATGCTAGCCTCGTT GCCTGGACCAATCTCTGTAAGTCGTGTCTGCAGATCCCGTCTCGTCCATA GGTGCGAGTCTCTCCACTCGCGCGACCAAGTGATTTTCTGCTCTGGAGAG TTACATGACAACTCCCAATACCCACTTACAGCAGTGCTGGAAAGAGTGGC TCCACGAGCTTCCACGACGAGCTCCCCCAGAACGCTTTGAAAGAGAAGGG TCTGTGTAAGCCGTAACACGCTGGCTGGTAAAAACGCATCATGTCACTCA AATGTATGGTCACATATCTAGCAAGAGTATGGATCAACCGGGTAAGGTTG CCAATCCAGCTCGTGGTCAGCTGAACAGGGAAAAATAATATTTCCCTGTC CACGTTCGTGCCTTAGGATTCGTTCTCGCTAAACGGGTTCGGCAGTCCCG TCCCACGTCAGCCTGCTCATCTCCATACTCAGGCTGAATATGGTGCTTAG GCCAACCTTTATGGCAGACAGAAACGACAGTAAAAAAACAAAACAAAAAA TGAAATTTGTGGCGAAAGTTTTGTAAACGGCGCGCTATGGGCCCCAAAAC ACGGAAATTCCTCCCTACAGAAATTGCGAAATTCTGTGGGAGGCTGTTTT TCTCTGCCGAGACCTACAGAATTTTGGCTAAATTCTTTAGGTGGCTCGAC AACTTTACTTTGCCACAGAAATGATTCACGCCTCCCCAAGCACGATTGGG AGGTCGGGACTGTAGCATCCCTCCTATCAGAAATCGGTAAAGAAGAGCTC GGCTTTTATGGGATGGGTGCCGAGCAGCAGTAGTTGTGCGATGATCGCCG GAGCAGCAGATTTGGAGGAAATTTATAGAAGCTGTTGAGGTGATGGGTCT GGACAAGCAGATTTGGGGGAAAATTTTAGAAGCTGTTGAGGTGATGGGTC TGGACAAGCTGATTGCCGGCGGCGGGAGCGATTGAAGGGGTGGCGCCGGA GATCAAGCAGAGACGGACTGCGTGTACGAGCGTCCGACGGCTCACCATCG AAACGATGTCGCTCTGCGCACTCTATATTTGCGATATACTCGTAATTAAT ACTAAACGACCCTGTCTCGCCAGACCATTTTCTCAGGCGCAAACGAAGAG AGGGAAATATTATTTTTCCCTGTTCGGTTGACCACGAGCAGGACTGGCAA CCTTACCCGGTTGATCCATACTCTGCTATGTGTACATACCTGCAGCTGTC TTCATGCGGTGATGGGTGGCAGAAAACGCCGGGGTCGACCCGCTATATTC CCCGCAATTTGTTGTGTGTTTTTCTCCATCCCATAAAGGGTCACCTACAA TTTTTCTCCACGGATTTTTCGGCCACATAATTTCCACATTTCTGTAGTTG TTTTTCTTGTTTTGCCGTCTCCCATAAAGGTTGGCCTTACTTACGGGATT CCTCCCAAGTTCTGCGGCAGCGTCCATTTATTCATTTAAAACCGCCATAC CTGTACGCCATCGGGTCAGTCCCGAGTTTATCGGGTCGCGCAATTGCGTA CCGATGGCGTTCACTGCCGAGAGTCCGCCGACACAGGGCCAGTAAACCCA AAGGTAGTTCCGAACGAGTGCTGCCTTGGCAGGTCACCATGGACCAATTA ATATGCGCCTCTCTTTCCCACACCCACTATTGGTATGAAGTGGTCATATT GAAAGTACCGGCCATGCAGACCGTTGATGCCACGTGCCGCCCGCGATGCA GTAAACGCCTCCTTCATACCCAATCCGTTTACTACCTGCAGTATTACTAT TAACAGTACTATACCGCCGGTGGGATATATCGTGAAATTTACTTACACTG CACTGTGCTACACCTGTGCGTTCTTTTTCGTTGAAGCTCCCGCATTTTGA GAGCTCCGGCGGAAGCACTCAATGATGACGCATTCGTGAGCTTGAAAGAA CGAACCACAGAAAACTTGAACGCTCGCCAGGCGGACGGTTCAGCATAGAC AGTTGTCCCCGTTGATGGGGACTCAAGCGCAGTGATTGGGGGGGGGGTGG AATCGATACATCAATAGCGCTCCTTTCGCAGCTGGCGTCACAGGGCAGCA CTAGCTCAAGTCTCTCGACTTTTGTCCATCTACTCTCAGCTCAGCAGTGC CGATCCGCTTGTGAACTCCACGTCCTGTTGGCGCAAACTTTGGAAACGTC AATATTGATAGCAGAGGGACAGGAGAGTGGAGCGGGATCAATTAGGCTGA ACGAAAACCACCTCGTGCGAATGTCTTGTGAATATGGATGTATGGATGGT CATCACATATAGCAAGAGTATGGATCAACCGGGTAAGGTTGCCAACCCTG CTCGTGGTCAGCTGAACAGGGAAAATGAATATTCCCCTGTCCCCGTGCTT GCCTGAGAATTTAGTCTCGCGAGACGGGTTCAGCCGTCCCGTCCCGCGTC AGCCTGCTCATCTTCGTACTCAGGCTGAATATGGTGCTTCCTTACGGGAT TCCTCCCGATTTCTGCGGCGGCGTCCATTTATTTATCCGAAACCGCCATA CGCGATCGGGCCAGTCCCGAGTTTATCGGGTCACGCGATTGCGTACCGAT GGCGTGTATCACTGCCAAGAGTTCGCTGGCACAGCGCCAGTAAACCTCAA GGTAGTTCCAAACGGGTGCTGCCCTTGGAGCCAGGTCACCATGGACCAAT TGATACGCGCCTCTCTTTCTCACACACACTATTGGTATTAAATGGACATG CTGAAAGGTGAAACAATGACGCAAAATGTGCATTAATGTAATGACTATTA ATACCAGTACTGCTGTAGAGCCTATAATTGTTTAAAGAAAAGTATCCACC CAATCAGGGGGAGGGGGGGGAGGTGATCAAAACGTTTAGATTCACGCATT TAGCGTATTGTCCTTGCAACTGAAGAAACTACGGTGACACAACAAGTCAG CCATAGGCCAGTTGTGCTCGTGGTCACAAAGAGGTACGAAGGTCAACGGA TCACATCATGGGGACAATCCGCTACTCAAACCAACAGGGATGCAAATCAC GACACAGTCCTTGCCTGGTCCAACCACCCTATTAATACTATTAAGATTAA GAGAAGGAGGGAAAAATATCGGCGTCAAGACGATGTTGTTCGGGCACGAA CTAGAGCCATCACTGTCTGGAGTGCTGCCAGTATTTCAGAATCTGATTTG ATAAGCTACAGGGATGACCGTTTGAACGTGCTGCCCATCTGCCGAAGTAT CAAAAGTGACTCCCCAAAGTTTTTGTAGCTTCCGGGGGGGTTACACGGAG ACAAGCTATGCGACACTTTACAAGCGCTGGCACCGACCAATGGCAAAACG GTTCATCAAACCTCCGTACTAGATATCGAGAGCAACCCCGATTGACTTGA ATTCTTGGCGCCTGCCCGTGGCCAGCGTTCCCAGCAACAGAGCGGACGAA TCACGCTCCAATCAGTTTTGGTCAACAAGCCCAAGTTTCTCAACGTCACG TCATGCAGAATAAGAAGGAAAGTTGTTGAACAGTCCATGGCGGTGGAGGC CTTGAGCTGGTGAAGCCAGCGTGCGAGCCAGCATCCAGCCATCCAAACCC CTGTGCATCCCTGAAAAACGCCCTAGGAATTTTGCCGTTCCCCGCTCCTT GCTGGCCCTCATTGGAAGAAAACAGACCGTGGTCGGAGATCAGCTTTCCC CCCAGAAATCCCCGGTTAGCGACTTTGCTTCTCGCGCACAAGGCTTCAGC ACTCCCCTGGCTCGTCGACGATCGACCTCCCTCCGCCCGCGCCGAATCTG GTGTTTTTTCACCCGATAGAGCGTGGCACGGTACGCTTGCGTGTGCTGCA ACGTCCTACCAGGCTTTCCGCGACAGGGCCCCCTGCATCTCGCGTACCAC CATTAATACCTCCCGAAGGGTACCAAATTGGAGCTAGGAAGAGGCGCACC GGGTGAATACCATCCTAGCCAGCCAAACCTCCGCCGCGTCTCAACCGACC GGCTGAATCCCGTAGACAACCAGTTGGTTACATCCCTTGAGGGTGAATCC AGCTCTGTACCCACCCACCATAGAGACCCTCCCACACTCACACAGCAGTG GACCCGATTTTATACCGACCGAATATTGACCAACTGGATTGTATGCCGGT ATGATTGGCTCCGCACCAACTCCCCTGGGTTTTGTGTCGGTTTTGCTATT GCGTCGCCAAACCGGCACAAAATCGGGCCAACAGGGCCAACACTCACGCG CAAGAGTTTGATTCAAACCATCATTCATGCGTCATGCTCGGTCTGTAGTA CGGTAGACTGTGGTGTCTGTAAAGGAATAGGGTACTGTGGAAGGTGTACT GTACAGCGTCTTTAAAGGTACACACTATCTGTAAGGTAAGGGGAATGCCC TGCGTAGCGGGTGAACGCTGCAAGCTCAAGGGCCGAACACTAAGCCCTCC CAATTACACCAGCCATAAATGCCGCGGGCACCTCCACGATATATGCGGGG GCCTGACCATGTGTCTAATCAAGATAAAAACGATTTTTTGCTTTTATATT TAATGCCGGTGATTTTCGCCTCACACTACCCGGAATACAATTGAGTCATT GAGTCCACTACTGCACCCGACAACTAGGTTCAGGAGGGAGGGCACGAGAT ATTTAGCACCCTAATATGATATACAGTATGCCTGGTTGGATAGGGACCTG AAGCGGGATTGACCACACTACTGTTCGGCAACCAAAACGTTGAAAGTGTC TTCCAACAACACGACTACGGGGCAGACAGTAGCATCTTTCTTGGAGCAGT GCCGCCTCCTCTTTGGGAATATCACGGTGTACAGCGGTAATTATATTAAT AGTATTTTGTTGGGGGGGGGCGCTACTCTTGTAACGGCGTTACAAGGCCC TTGTTTCCCGAAACGCGACTGCTTGCACGCCTTACCCTCGGAATCTCGCG CGTCTTTCTGAGCATCTTCCTGAAATACTCTTTTTTTTCTTCTTCTCTGT TTTATCTCAGATTGTCGGGAACATCTTGACCAATCCCGGCGACGTAAAGT TTAGAGAGCTTCGGGTGAACAACAAGATCATCCAGCGGGCGGTACTGAGC TGCCACGGCGGCGGGGAGTTCCTATCCCTTCTTGGGTTCGAAAAGTGAGC TTCTTTCGCTGCCCGAGAAAGCCGTCGGTTGTGTCTTACCCTTGTATCCA CAGTATTATGCTGCACTCCGAAGCGACAGTTAGTTGGAACGCCCTTGCGC CTATGTGTGGTGCTCCTCTTTATGAGAAATATCCACAATATTTAACATTG CGCTCTTTGTGGAGACCGTTCCCGTGTTTGCTCCACGCGGAGAACTCAAT CTGCGCTGCTTTCTGCTGCCCGCGAGAACTTCAGCTAACGACGAGTCCTC TCAGCGAAATGTGACACGAGTTTCTACCCTCCCCTGCCCACCCGTCGCTT CCTCCCGTGGCCTCTCCACGATACACCTCTCTCCTTCCATCGCCCGCGGA CCACTGTTATACTAGAATCAAGAAGCATGGCGAATTTTTCTATTTCATGT CGGAGCCCGAGCTGGATCATCTGACTCAGGCGAGGGACTGGCTCAAGGAT CGAGTAAAGGCCTGCGAGGCGTCTGCGGAGGCGTCGAGCGGCCGGGTGTG CGCGGACACGGTTTTGACGGTGAGGACGGTTCGCTTCTCGCTTTATTCTC CCGCAAGCCGTGCCTGGAAAGTCTTCGGGGTCGATCGGGTCTCTCGTGGT TAAGCCAACGCCGCAAACAGTGTTTTTCAAGAAGCTCCATGCTTGTTTCC ACGCCTCGAGACGTTCTTGACTATAGTAAAGTACTATGTTTTCGCGGTAG CAATAGTCAACGGCAGACAGGCTTGCTCGACCCGGGGCGGATCTCTAGAG GATGCAAGAGTAGCGTGGTCAAACCTTTCTCGCGCCTCCACCACATCGCC GCCGATGTTTTGAGGCTTCGTTTTCTCAATATCTCGGATTTCTGCTCCAA ACCGCGTCGTGTTTTCAGATCCACCTTACGAGCGGGCAGACACTGGACGG CGGGTTCTACGCGCACGAGACGGTGTCGGATGTGTACGGCTTTTTGCAGT CCTCCGTCGTCAGTGGCGCGTGAGGGGTTTCGACACGAATTTTGCGTGTA TTTTTTTGTGTATCCGTGGAGAGGCCGGGAACGAACAATACGGGGCGAGG CAGGGGAAGGTTTTTTATCTCTCTTTTTTTTTGTTGTTGTGCGGATGGAT TATGTTCTACTAAGCGTCGCGTAGAGTCGCAGCCCCGATATAATGTTGCC TTGCGTCCGACCCAGCAGTTTTGATTGATTTCTTACGGGGGTTTGTCGTA CCTCTCGCCTGCCCTTGTCGCTCTTCGCCGGTGGACTGGCTGATTCGTGC GCAGGGTAGAGGATTTGCGGTTGAGCATCATGGCACCGGCAAGGATTTTG GGGGAGGAAATGCTCGCCGTCAGCCTCGCAGACGCTAGTGAGTTCCTCCA GATCCTTTTCACCGCACCATTTCTTTCAGCCTGCGAGGCGTCTAAGATAT AAATATTACTGCATGAAGAATTGGCCACGCCGAGCGTTGAGAGCCCCCTT AATATATATATCTATGTATCCCTGCACCCATGCACACGCCTTCTCAGGCT CTCTACGTACCCTGTCCACCCACGCCTCCGTCCCTTCGAGAGGCTTGGGG GTGGGTGCACCAAAGCAACCTAATTTTCTGCTCAATAAATTGGCTGTTCT TGAGCAGGAAGTACTGTAATCTAGAGATATGACTTCGGGTTTGAGGATTT TCATTGTTTTCAAATGACCCGCTTTCTGCCGCTCGGTCCACACGCGTGGC CGCTTACATGCCTCCGCCAGAGCTTGTGCCCAAAGCTAGCCTCGCCGTGA TCAAGTCGCCAATTGCGACAACGCCTACGCTGACGCCGGCATCGTCATCG CAACCCAGTAGAAAGAACGACTCCGAGCAGGTCAGAGAGGCCGCCGAGGC TTTCTGTGCGCCGTGCGGCTGCCCCACCGAGTTGTGTGGTGTCTATGCTA AATCTCTATAAACGATACGGTACTATAATAGTAGTGTCCTACAAGCTGCA TTTGGCCCGGCTCACGCCTTTGGTGTCTTGATGCGGTTGAGGTAAAATAT CCAAAGGTACAGAAAAAAATCTGTATACGAGCACATGCATTATTGTTAGT CTTTTGGGAGAACAAAACACTCCCACCAAAACGGAACAATACTGTAAACA GTATAGTAATAGGTCGTACTCGTACCAATGGCAGGAAGAGCACGCACGTG CTGCCCTGCCCTGCTCTGCTCTGCTCTGCTCTGCTCTGCTCTGCTCTCGT TACGATTTCTTCCTTCTCCTTTTTTTCCGTTTCTTTTCGTCTGTATTTCT TTGTCTTGCCGTCTCATTACACATTCCTGCTGACTCTGGCGTGGTTTTTG AATTCACCGATCACCGATGGCTCTGGCGCAGGACGCGAAGGAACAGCTAC GATTGCTTAAGGAGTATAGCGTGAGGAAGAGCAGGGACACCGCGGCCGAG AAGGTTTGGTGCAGCACCCGGAACGCACCGTATTTGCGACGCACTGTGCC TGAGCAACTAGATACGGCTGTTGCGCGCCCGGAGCTGATACCACTACTTG TTAGGTCTTGAGGGGGGTACCTCTATTTGTTAGATGTTGAAGGGGGTTGT GATACAGTGGCTGTGATACGGTGGTCGGCCCACGTCAAGCCTGTTTTTCT GGGCATTGTGTTCCTGTCTCGTGTCGATTCAGCAGATGGGGTACGATGTT GTTACGATGTCGAGGTTGGATCGATGGGAAAATTTTGAAGGAGAGCTGCG CGCGAGCTTGCGATGGAACGGGGGTTTGGTGATTCGATTAAACATGCGAT TGTGGTTCTGATGCCTTCCCCTCGCTTACCCGTCGCGTGTGGATGTTGGT TGTGGGTATCGTTGTGTATATCATGATGGATGATGGATATCATCTGCCCC AGGAGAAGGAAGATGCGATGGCGAAGTTTAGGGCAGATCGAGTCGCGCTC GCGTCAAAACCGCAAGAAGATAACGGAGTGGAAGGCAAGGAAAACTCACG ACATGTTGGGTTTGGTTCTCTGTTTCTTTTTGGTGGGGCTGTAATGGGCC ACTCTGCTTTTCTGAGGGTAAGACCGCGATCAGCGTGATTTCCCTCTGTC CATTCTGTCAAGACGCCTCTCCACGCGTTTTCTAATATCGCTCATGTCAA AACGTTTTGTTTGCAGTACCCTGGTGTGGTCTGCTCGATCACTCCGTCCA GTTTATAACTATTAATAGCAGCAGTAATCACTCTTGTGCCCGCCTGTTGC TTTGCTCCCTTTCGCCGTTCTGAACTGCATCAGAGACGAAGGGCGATCGG CGGTGAGACGACCAAGGACGGGCAGCATGTCGTCACCTCGAATCTCGCCA AGGAATGTTGACGTCACGATTTAGAGAGAGATATGTACCCGCTGTGTTGT AAACCCGTTTTTGCTAAAGATTGTGTCTTCCTCTTTTTTTCTTGTCGACG ATAGACTGTCACTGTCTGTCTCTTGACGATATGATGCCAACTCAAGGCAT CCCCCTATCAAACAGTAGCAGTGCCCGGTGCCGCAACAGCACAGCAGTGT TCCGACTTAGGTGTTATAGGTAGTACTCCGGTTGGTCGTTCCTTGAAATA ATGGCTAGAGCTGTAGGGGACACAACTTCTCTAGACCTGTAGTAGGAGTT TACATCGATCTGGTTTTTGACTGGAGTGTTTTGATTTTCGTTTTGTTTTT TCAGATACTAAAAGATCTTGCCTAACGGTTCGTGAATTTCGTGCCGTGTG TCATCCACGCTCTCGAACCCTCGTGCCACAAAAGCGGTGCCATCCCCTTG CGAGACTGTACCCCATGAAAAATCTAAAACTCTATTTTTCTGGAGAATCG CTGAATCAGATGAGGCTCCTTGAGTCTTACGTTACTCCGTACCAGTCTAA TTCTCTCATTAAGAATATTTATCAACACTTTTTATGTTAGCTCTTACTAC GGTAGTATATGTAGTATTAATAGCCATTGTATTATATCTGACCATGCGAG AGGATTTCGCTGATCGCGATGCCCGTGGCAATACTAAAACCAGC
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Coding sequence (CDS) from alignment at F-serratus_M_contig1408:130696..140339-

>mRNA_F-serratus_M_contig1408.2942.1 ID=mRNA_F-serratus_M_contig1408.2942.1|Name=mRNA_F-serratus_M_contig1408.2942.1|organism=Fucus serratus male|type=CDS|length=1746bp|location=Sequence derived from alignment at F-serratus_M_contig1408:130696..140339- (Fucus serratus male)
ATGGCAACCTCAACAGTTCAGGAAAGAAGAAAGCGTCTGGTCAATCGAGT
TGGTCGCCACCTTCCGTGTAACACTGTGCTTGCAGTCTCCGAGTTCGGTA
AAATCTCAGACAAGATGGCAACCTCAACAGTTCAGGAAAGAAGAAAGCGT
CTGGTCAATCGAGTTGGTCGCCACCTTCCGTGTAACACTGTGCTTGCAGT
CTCCGAGTTCGGTAAAATCTCAGACAAGATTGTCGGGAACATCTTGACCA
ATCCCGGCGACGTAAAGTTTAGAGAGCTTCGGGTGAACAACAAGATCATC
CAGCGGGCGGTACTGAGCTGCCACGGCGGCGGGGAGTTCCTATCCCTTCT
TGGGTTCGAAAAATTGTCGGGAACATCTTGACCAATCCCGGCGACGTAAA
GTTTAGAGAGCTTCGGGTGAACAACAAGATCATCCAGCGGGCGGTACTGA
GCTGCCACGGCGGCGGGGAGTTCCTATCCCTTCTTGGGTTCGAAAAAATC
AAGAAGCATGGCGAATTTTTCTATTTCATGTCGGAGCCCGAGCTGGATCA
TCTGACTCAGGCGAGGGACTGGCTCAAGGATCGAGTAAAGGCCTGCGAGG
CGTCTGCGGAGGCGTCGAGCGGCCGGGTGTGCGCGGACACGGTTTTGACG
AATCAAGAAGCATGGCGAATTTTTCTATTTCATGTCGGAGCCCGAGCTGG
ATCATCTGACTCAGGCGAGGGACTGGCTCAAGGATCGAGTAAAGGCCTGC
GAGGCGTCTGCGGAGGCGTCGAGCGGCCGGGTGTGCGCGGACACGGTTTT
GACGATCCACCTTACGAGCGGGCAGACACTGGACGGCGGGTTCTACGCGC
ACGAGACGGTGTCGGATGTGTACGGCTTTTTGCAGTCCTCCGTCGTCAGT
GGCGCATCCACCTTACGAGCGGGCAGACACTGGACGGCGGGTTCTACGCG
CACGAGACGGTGTCGGATGTGTACGGCTTTTTGCAGTCCTCCGTCGTCAG
TGGCGCGGTAGAGGATTTGCGGTTGAGCATCATGGCACCGGCAAGGATTT
TGGGGGAGGAAATGCTCGCCGTCAGCCTCGCAGACGCTAGGTAGAGGATT
TGCGGTTGAGCATCATGGCACCGGCAAGGATTTTGGGGGAGGAAATGCTC
GCCGTCAGCCTCGCAGACGCTAAGCTTGTGCCCAAAGCTAGCCTCGCCGT
GATCAAGTCGCCAATTGCGACAACGCCTACGCTGACGCCGGCATCGTCAT
CGCAACCCAGTAGAAAGAACGACTCCGAGCAGAGCTTGTGCCCAAAGCTA
GCCTCGCCGTGATCAAGTCGCCAATTGCGACAACGCCTACGCTGACGCCG
GCATCGTCATCGCAACCCAGTAGAAAGAACGACTCCGAGCAGGACGCGAA
GGAACAGCTACGATTGCTTAAGGAGTATAGCGTGAGGAAGAGCAGGGACA
CCGCGGCCGAGAAGGACGCGAAGGAACAGCTACGATTGCTTAAGGAGTAT
AGCGTGAGGAAGAGCAGGGACACCGCGGCCGAGAAGGAGAAGGAAGATGC
GATGGCGAAGTTTAGGGCAGATCGAGTCGCGCTCGCGTCAAAACCGCAAG
AAGATAACGGAGTGGAAGGAGAAGGAAGATGCGATGGCGAAGTTTAGGGC
AGATCGAGTCGCGCTCGCGTCAAAACCGCAAGAAGATAACGGAGTGGAAG
AGACGAAGGGCGATCGGCGGTGAAGACGAAGGGCGATCGGCGGTGA
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