mRNA_F-serratus_M_contig1021.291.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig1021.291.1
Unique NamemRNA_F-serratus_M_contig1021.291.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
BLAST of mRNA_F-serratus_M_contig1021.291.1 vs. uniprot
Match: A0A6H5KQR3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQR3_9PHAE)

HSP 1 Score: 129 bits (323), Expect = 4.270e-30
Identity = 80/199 (40.20%), Postives = 103/199 (51.76%), Query Frame = 1
Query:  286 LPGSSVVRHKVRRQLFSEASEARPMVFCPFCGDGVLASGRLREHLEACYVFARSRGSQTHFEVEAAVRAVSGKGKKPALRAKGSCDEDPCEVAGTYSAEDKIAFHKASI--------REVASSATVPGDGNKSATDTTLEARGEKHEESFISDDREPSFVSLVQNSLADAKISGDGREMERCEGCGRTFAPGRLHSHAK 858
            LPGSSV+RH+VRRQLFSE SEARP+VFCPFCG+GV+ +  LR+HL+ CYV  R RGS+TH +VE A++AVS + +                  G++     +  H  S           V + A    +        T   RG    E           VS V + ++       G + ERCE CGRTFAPGRL SHAK
Sbjct:   98 LPGSSVLRHRVRRQLFSEDSEARPLVFCPFCGEGVVRARGLRDHLQECYVLDRCRGSETHKQVEVAIKAVSVENQMHTSATNTHGRRASSLNDGSFQDSSTLLQHALSPFVSKGNDPENVLAPAVASENSELGRVVATGGLRGTAGGE-----------VSGVSSEVSSGGGGAGGAKFERCEDCGRTFAPGRLRSHAK 285          
BLAST of mRNA_F-serratus_M_contig1021.291.1 vs. uniprot
Match: D8LFQ9_ECTSI (WW domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFQ9_ECTSI)

HSP 1 Score: 129 bits (323), Expect = 8.610e-30
Identity = 90/213 (42.25%), Postives = 108/213 (50.70%), Query Frame = 1
Query:  286 LPGSSVVRHKVRRQLFSEASEARPMVFCPFCGDGVLASGRLREHLEACYVFARSRGSQTHFEVEAAVRAVS-------------GKGKKPALRAKGSCDED---------PCEVAGTYSAEDKIAFHKASIREVASSATVPGDGNKSATDTTLEARGEKHEESFISDDREPSFVSLVQNSLADAKISGDGREMERCEGCGRTFAPGRLHSHAK 858
            LPGSSV+RH+VRRQLFSE SEARP+VFCPFCG+GV+ +G LR+HL+ CYV  R RGS+TH +VE A+RAVS             GKG   A    G   +D         P  V+     E+ +A   AS           G G  +A        GE               VS V   ++       G E ERC  CGRTFAPGRL SHAK
Sbjct:  896 LPGSSVLRHRVRRQLFSEDSEARPLVFCPFCGEGVVRAGGLRDHLQECYVLDRCRGSETHKQVEVAIRAVSVEHQMHTSATNTHGKG---ASSLNGGSFQDSSTLLQHALPPFVSKGNGPENVLAPAVASENSELGGVVATGGGRGAAA-------GE---------------VSGVGLEVSLGGGGAGGAEEERCGDCGRTFAPGRLRSHAK 1083          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1021.291.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KQR3_9PHAE4.270e-3040.20Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LFQ9_ECTSI8.610e-3042.25WW domain-containing protein n=1 Tax=Ectocarpus si... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1021contigF-serratus_M_contig1021:235262..243814 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Exons6
Model size861
Cds size858
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1021.291.1prot_F-serratus_M_contig1021.291.1Fucus serratus malepolypeptideF-serratus_M_contig1021 235264..243814 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928825.4854467-CDS-F-serratus_M_contig1021:235263..2355561622928825.4854467-CDS-F-serratus_M_contig1021:235263..235556Fucus serratus maleCDSF-serratus_M_contig1021 235264..235556 -
1690962589.76849-CDS-F-serratus_M_contig1021:235263..2355561690962589.76849-CDS-F-serratus_M_contig1021:235263..235556Fucus serratus maleCDSF-serratus_M_contig1021 235264..235556 -
1622928825.5056658-CDS-F-serratus_M_contig1021:237279..2373731622928825.5056658-CDS-F-serratus_M_contig1021:237279..237373Fucus serratus maleCDSF-serratus_M_contig1021 237280..237373 -
1690962589.7782743-CDS-F-serratus_M_contig1021:237279..2373731690962589.7782743-CDS-F-serratus_M_contig1021:237279..237373Fucus serratus maleCDSF-serratus_M_contig1021 237280..237373 -
1622928825.5209115-CDS-F-serratus_M_contig1021:240563..2406111622928825.5209115-CDS-F-serratus_M_contig1021:240563..240611Fucus serratus maleCDSF-serratus_M_contig1021 240564..240611 -
1690962589.7878044-CDS-F-serratus_M_contig1021:240563..2406111690962589.7878044-CDS-F-serratus_M_contig1021:240563..240611Fucus serratus maleCDSF-serratus_M_contig1021 240564..240611 -
1622928825.5351424-CDS-F-serratus_M_contig1021:241687..2417951622928825.5351424-CDS-F-serratus_M_contig1021:241687..241795Fucus serratus maleCDSF-serratus_M_contig1021 241688..241795 -
1690962589.7994-CDS-F-serratus_M_contig1021:241687..2417951690962589.7994-CDS-F-serratus_M_contig1021:241687..241795Fucus serratus maleCDSF-serratus_M_contig1021 241688..241795 -
1622928825.5475874-CDS-F-serratus_M_contig1021:242999..2432701622928825.5475874-CDS-F-serratus_M_contig1021:242999..243270Fucus serratus maleCDSF-serratus_M_contig1021 243000..243270 -
1690962589.8083508-CDS-F-serratus_M_contig1021:242999..2432701690962589.8083508-CDS-F-serratus_M_contig1021:242999..243270Fucus serratus maleCDSF-serratus_M_contig1021 243000..243270 -
1622928825.567215-CDS-F-serratus_M_contig1021:243770..2438141622928825.567215-CDS-F-serratus_M_contig1021:243770..243814Fucus serratus maleCDSF-serratus_M_contig1021 243771..243814 -
1690962589.8178627-CDS-F-serratus_M_contig1021:243770..2438141690962589.8178627-CDS-F-serratus_M_contig1021:243770..243814Fucus serratus maleCDSF-serratus_M_contig1021 243771..243814 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig1021.291.1

>prot_F-serratus_M_contig1021.291.1 ID=prot_F-serratus_M_contig1021.291.1|Name=mRNA_F-serratus_M_contig1021.291.1|organism=Fucus serratus male|type=polypeptide|length=286bp
KAVRNESGINCGTLRNEEDGIASTLPRSVAAKAPGTPPTAILTISRDGDM
GATESELATRSTSRFAAAQSQAKENRIELRTGNGGHDGDLEVEEGLPGSS
VVRHKVRRQLFSEASEARPMVFCPFCGDGVLASGRLREHLEACYVFARSR
GSQTHFEVEAAVRAVSGKGKKPALRAKGSCDEDPCEVAGTYSAEDKIAFH
KASIREVASSATVPGDGNKSATDTTLEARGEKHEESFISDDREPSFVSLV
QNSLADAKISGDGREMERCEGCGRTFAPGRLHSHAK
back to top

mRNA from alignment at F-serratus_M_contig1021:235262..243814-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig1021.291.1 ID=mRNA_F-serratus_M_contig1021.291.1|Name=mRNA_F-serratus_M_contig1021.291.1|organism=Fucus serratus male|type=mRNA|length=8553bp|location=Sequence derived from alignment at F-serratus_M_contig1021:235262..243814- (Fucus serratus male)
AAAGCTGTGCGCAATGAAAGCGGCATCAATTGTGGAACTCTACGGTATGT CATGTGTTTCATTGTTTCTAGATAGTTACGAAAAACAAGCACCCATACGG TTTTGGCCGAAGCCTTTAAACCTGGTCATAAATTTATTTGTAGGCAGGGT TTCATTTTCTGTTGCGTCCTTGCACATTAGGTTTGGTGCTTGCTATGTTC TAGATGGTTCCATAACTTCCACACTTCTAAAAATGCGTTTGTAAGTTTTG CCTCTTCGTTTTCCCCAGCTTCTAAAGCACGCATTTCAGGTTAAACACTG TGTACTTGATCTGTAAGATGCCATCGCCATATCTTCGAAACAAAGAAAAA AACGAATGCTTGCGTATTTTCCCTGTGCCTTTGAATTCATGTGCGTATTT TTACCATGTTGTTTCATTCTATCTCATGCAGTTTCGACCTGGAAGTGGCT TGTAGCTTCAATGTCCAATCACAAATGAAATGGAAAAGTGAGGTCTAGTC TGTTTTCGCCCGTTTCAATGTTTTCTCCTGTCTTCTCAATACAGCAACGA AGAAGATGGCATTGCGTCCACTCTTCCTCGAAGTGTCGCTGCAAAAGCCC CTGGAACCCCGCCCACAGCGATCCTCACCATTTCTAGAGATGGGGACATG GGTGCAACAGAATCGGAACTAGCGACCCGGAGCACTTCCCGTTTTGCGGC AGCACAATCACAGGCAAAGGAAAACCGTATAGAGTTGAGGACAGGGAACG GTGGACATGATGGCGATCTTGAGGTAGAAGAGGGTTTGCCAGGGTCATCG GTGGTGCGGCACAAGGTGGGGAAGGGAACTAACTTACACCTTTCCCAGCG GTAATAATGTTTTCGTTTGCATCTAGAAATCGAAGTCGTTTCTCACTACA CATCGTAAAAAAAAAGAATACATGCGGGCTTGGGGTTTCCCTGCTTTGGA GGCCTGGGGTTTCCCTGCTTGAAAGTCTGGGTATGATGAGAATAATTGAC ATCACAAACCTTGTTTATGGCCACGACTACTACAGTAGTTTGCGAAATGC TTGAATGTAGGCAATACCAGATATGTTCGTCAGCACGTGTTTTCCCCCCA TTTTATCGTTACTCTGTTTCCTAAAATAACAGTGTGTAATACAACTATGA CGGTATCAAAAAGAAATTCCTCTCGCGTTCTTTTAGTAATGTAGAGTTTA CCGCCACCTTGACGCCAACATGCGTACGTAAACATAGATCTGTACCGCAC CAAAAAAATAAAAGAAGCCTTTTCCCACTTTTTCTTGTCGGTCTTGATTG CTAAACTACACTATATATTAGTTGATACAACTTTAACTGTTGAATGCATT ATCGTTAGAGATCTCGCTAAGAACTATCGAAAATTGGGAAATATTTAGTT ATCTGAATGAAGGTCCAGATGAAGTAAAGGTTCGGTTCTTTTTCGCCGTC GAAAGAGATTTGAATCCGGCTTTGGGAGGCGAATAATCATACCCGATAAT AGAGCACTTTCTGTCTTTTAAAGAAAAAAATGAACGCATCTGAGCTTGGG AACATGGGCTGCAAGGACAAAATCTCTTGTTTAGATCCAAACGGGTTCCG GAATGTTAGTATCATAGGGTCAACATTATAAGATCGGGAAGTGTTTCACC AATGCCAGTGTACGTATGGTTTATGTGTTGCGTCCAGGCCTATGTGTCTG CACATGTTTTATCCACGAGTCTGGCGTTTTTGCTTCAGTTTGTTACTTTT ATCGCGGAAAAGGTGCCCTCAAGTCCAGTAGCCCTGGTGGCCTTCGGTAG GGGAGATTTGCCTCCATCGAAGCAACACACGATGAAAATCTTATGAGGCA ACTGTCACTGTTGTTGTGGTCGAAGCCAGAAATGTGCGAAAATTTCTATT CACACATGCTCACGTGAAGATTTCTATCTCAAGACTCGGAAGCAGTACGC TATGTGATAGTTTACAAAACTGTGAACAGGTTGGCGTCACATGCTACCGT GAAACGTGACATCCCTCAGGTACGAAGGCAACTCTTCAGTGAGGCATCCG AGGCACGGCCTATGGTGTTTTGCCCCTTCTGCGGAGACGGGGTTCTGGCC TCGGGAAGGCTGAGGGAACACCTCGAGGTGAATCGGTAGTAGAACACCGT TATCAATTTGTCGTGAGCTGTTTCTTTCGTTCCAGAATAGTCGTTGACGA GACATTTCGCAATATGATGTTGGGTAGAGAAAAGAGTCTTCGTGGTGTCG GTTGGGTCTAAACGCTGACAGTTGAACGGTCATAAAGAGTTCCTTAGACA CCCTGCTATTGAGCTGACATGCCGAGAAAAGCCTTTGGTGCACCTCGAGC TCTCGAGCAGGTCGGTCCACAATCTAAAATCACGAACGTCGTAGATTAGA GCTACTCACAATGTATTATTAATAGCACCTCTTGATTGGCTTATTGCGGC AAGGACTTGCTCGCGTATATTTCCCTTTAACCAAGTGTACGTGTGTGATT TTCGTAGTATACAGAGTGTGAGAGAATATCATTCCGGGCGAGGAAGTATT TTCCTGACACATTTAATTTGTTAGGGCGATGCGAGCGTGCGTCTTCTGCG ATGAGAAACTTGTATCATGAAAAAAGAAGGGGGGTAATCAGAATTCGCGT AGTATCATTCAATCATATGGGGTGGTAATCAGACGTGAAGCTTGTTCCTA TTAATAGCTGTAGATAGCTGGCCCCCACCGATATCATGATATCGACACAA AATATTTCAGGAACACAACCACTGTACTATTGCCAGTCGTACCGTATTAG TTTTGGTACAAACGTGCTAGAGGTATAGTACGAAGTGTGAAATGTTCGTC GAAAAACTACAATGCGGTATAGGTAGCAAGTAACCTCAAACGTTTGTTAC ATGTTCCTGTCAGACCTTACCTTGCGCAATTAGAAGAAGACGGTAGCTCG GGATGGATGATATTTCATCCTTTTTCAAAATATAACCTGAGTGTTAACAA AACAATACTTCGTATTTAGTTGTGGTGTTTGGAATCGAGGACCTCCCAAA ACTTATCGCCTGGACGAGATGACAAATTATACTTCCTAAAGCATACCAGT TACAAATATCATTCTTCTCCTCTCCCGTGCTGTCTTTGCCCCCTTCTTAT TTTGTAAATCTATTGCAAAAAATATACCACACTCCACCTGGTCTACGTTT TAGGCGTGCTACGTCTTTGCCCGCTCCAGGGGAAGCCAGACACACTTTGA GGTGAGCCATTGTAACCCACGGCTCACAGGCTGCTGATCGGCTTATTCTA GTAGGCGGGTATAGAGCATCCTAAGCACGGAGGGTACTGGATTCTCGCGA CACAGTTGGTTTTATTTTTGGTTCTCGCATTCAGCCTATTGGTTGCCAAC CCGAAAAACTACTTTACACGACGGCCAATCCCGCTCGTGGTCTGCTGAAC AAGTAGATGAGAAGAAAAAAAAAAGTATGGCAGCCACCCCACCCCCCCCT CCCCACAAAGCTGGTCGTTCGGAGAAAATAAAATCGAAGCCACGTGACGC ATCTACATGCCCTAGGTGCTACGCATTTCTCGGTCCGTCTCGCACCCGTG CAGGATTCCTCGTCGACTAGGACAGTAGATTTCGCTCCACAATATTCTAC GCTCCCGTTTGCGATAACATCCTGTCAATATCTAGCCGAGTCCACCTCTT CTTTCCTCCACGCGGCCATGAACCTGCTCCCGCCCTTCGCGACCGTCTCA ACCCACCTCAGTCTCCAACGCCGTTGCTTCCCAATCCCCCGCTATGCCAA AGCCCGGATGTTGCACTGTACGCAATCGACCCACTCTTTTTCCCTCCTAC CCCGTCCTCTCCGCAATGCACCCTCAAGATTCCCGGACACAGTTCGCTTA TGTAGCCACGTGCCGCTCAGATTTGGATGAGTGCCCCCGCCCACTAACGT TTTCTCGTGCGCAACGCTGTCTCAATGCTCTCACCGGGTTATATCAAGGG CACGCTTATACGAGGTCGTTCGATGGTCTGGTTTTTTGCGCTGCGGCCCG ATTAGACCCGGTGGTGTACAATGCGGAGTTTGGCGTAGTGTTCCTGTCGA AGGGTCCACGTACTGTATCCCTACACGAGGGCCTCGAATGCCTCGGCCTT TACCTTTCGCCCTACTTTCTGTTGGTCGTAAAGCTCACATAGGGACCGGC CTGATGCGCATCCAGCATGCGCGGGTTCGCCAGGCGATTTCAACGGGCAT GTCCGCGATTCGGTCACAGATGAAGGATTGCACCTGTTTGTTCATTTGCC CGGCCGCTTCGACTCGCACCATCGTCCGCGGTTTACGCGATGGAGGCATG TACATGGTCTATGTCTTCTTCGCCTACACGGTCAAAGCGAAGGCTCGGCA AACCCTATATGATGACTTCATCATCTTAGCGAGCCTCTGTGGCGATTGTG AACTATGTAAGCGTCATTCGCATACAGCATGCCCCACCGCACGACGAACG CAGTCCACAGCCGGCTCCGGTCCCATTGACGTCGGCGGTTCCTTTAGGCG CACCACGTCGGCGAGGGTGACCATATCCTCGCTGAATCTTCGGATGACAA CGGTCAGCACGGCTGCGAAGACGTCGAACAACGGCGGGGATAATACATGT CCTTGCTGTAGTCCTTGCTCCACAATAAACCAATCCGAATATACGCCGTC ATCAGGTCGCATACAAGCTCTCATACCCGTCGTGGAACTGTTAGATGACT GTGAATATCGTGTATTTCCTGCGTTTGGTGTAAATTGAGTGAAGCTTTTT GCCTTGTGTTTTTTCCGCCTTTTTCCGCTATCTCAGTTTCAAGGTTGTTT GCCGACTTTTCGGTAATTTTTTAATTTCCAGAAGTGCAAACCAAAGCACC ATGCTTTGGATGATAGCTGTATAGTATGAAAACGTTGAGCGCGTTCAGGG TCAGAATTCTTACTGTTATCCACCCATGCTTTCAGCGAAGACACTGTTGG CGTTTCCAAGTAGTTTTTTGACAGGGATTCTTTCTGGGTACGCCACACTT AATACAGACCATAGTATACAGTATTATAAATAGTACAGAAAGTATTTCCT CAAGCCGCACGGCGGTAAAAATATTTCCCATGCTATTTGCAATTTTTAAG ATTCGTCGTGGGTTCCCGAAATTCCTTTGACCGGTAACCACTAGGCTCTG TTGGTTGGTGGCCACCTCAAAATTCACGCAGGGACCAACCCAAAAATGTA ATAACGCGAGGGCTGGCAGTTGAGTTTCTTGAGGTTGTTAACTGCGGTAT CATCCGAGTCTAGATATATATCTATTTCTCGTGGGACGTGGATCACTTTT CCTGCTGCACAACCTCCACTGGTGATCTGTAAAGGCCCCATTGCCCAAAG CAAGGCTTGCCTAGCCTTTGCTGTGGCAGTTGGTATAAAGCTCGAGGGTC GGGCGTTAGATCTGAGCCCGATTTAGACACACGTTACCGGAGTACATCAC TGAAAACTCGAGTGGATGGCACAAACCTGGCCAACAAAAGCCTGTATATT TTCCAGCAATAAAGTACGTGACCAATGTTTCATAGGCCTCATGTTTGACA ACCTGATGTACATCCGTCATCCCCATGACGCAGATAATAATTATTCCTGA GATTGAAAAAGTAATTCGTCCAAAAATCCCGTGGATTTTCCTGCCAGAGG ACTTTTGCGAAAGAAGGGAGCTTTTCATTAACATGAAGATACGACGGATT GTCTGTTTTATGACCACTATATATCTGACTATTAATAATGAAACAAGACT GAGAGCTTTTTCCCAGTGATACCGATCTTCTGCTCCATCTTCGTGCCTAG ATGGAAGTTTTGCCTCCAACGATGTCCAGGCTGAACGGAGACGTGGGAGT CTTTGACGCACTGCACTATTTCGAGCTCGTTTGTACTATCCATGGTGGTG ATGCTACTATAATGGCGTTGTATGTCATGGTCAGTTAAATACGACCTTCT GATTAATGACTCCTCTGTATCTTAATATAAATATTTGGACGCCGCCGCGG AACCCGGGAGGAATCCCGTAAGTAAGCACGAGATTCAGCCTGAGTATGGA GATGATCAGGCTGACGCGGGACAGGACTGCCGAAGCCGTCTCGCGAGACG AAATTCTCAGGCACGAACGCGGACAGGGAATATTTTTTTCCCTGTTCAGA TGACCACGAGCAGGATTGGCAACCTTACCAGATTGATCCATACTCTTGCT ATATATATGTTAGACCATACATCTTAGAATGCCCCCCTCCACACACTTAG GTAAAATCCCCTACAAAGTTATTATTTTGGTTATTTATTATTCCTGAAAC TTGTTTGTCCCTAGCAACACCTGTCAGCAACAATACTTTAAAAAGCACTG AATGGTTGCGACGTCCTGTGTGTTGCGCATGTTGTCTTCAGGTGGAGGCT GCCGTAAGGGCGGTCTCGGGCAAGGGGAAAAAACCTGCGCTGCGTGCGAA GGGAAGCTGCGACGAGGACCCTTGCGAAGTAGCAGGCGAGCCATTTTTTT TTGTTACGGGAAATATCTACGTTACAGAGAGCCACCACTAGCAGTATTTG TTTTCTCATTTTCCCGTATAATTTGGCAATTTTTTTAGGCTCCGGGACAC AGAGTTTTGGATGTCTAATTACGAGGGCGAAGCCCGCGATTATTGAAACA GGTATTGTGAGGGTTGCTGGTTGGTTGGTATTTGGTTGTCTTTTCTTTTG TATTGATGTGATTGATGGTGCACAGCAGTGCAGTGTTTTGCAAGCGATAA GCGGTGATATTGATGGTATCATCCACAGGCACTCCTGCTGCGTGGGGTTC GGGTGTTTCTTCTTTCCGTTCTTCTCGTGTTACGTGGGCTGCTATATCAA GTGATGAGGTTTTCACAACGAGCGGTATACACCTATTACTCCCTACACAT TTTTACTGACAAAAAATACTGTGTAACATATATTTGTCGGTAATACTCTG ATTGACAATACTAGATTTGAACATGCTTAGTATGACGACCAAGAAGTCGA ATGCCTATGCTGCCCGATCATGCCAGCCCTGAGTACCGTGTAGGTTGCTA TCGTTTCACTAGCCATCCCACTTGCGACAAAGGAGAATTTTCAACCTCTC TTCGAGAATTGACAGAGAGTCTAGAGACAAACAACACCTGAGAATAGTTG TGCCCCTTGCCAGGCCTAAATGGCGGAACTCTCTTATAATAGAACGATGG TGTATTCCCAATCACGTAGACTAGTCCAGAGTAGATCCTGTACGAGAGCA GTAAAGCGGCTAAAGATGAGCGTATCACTACCGTTTAGACATGCAGTATT ATACTTACAGATGTTCGAAGGGGTGTCGCAATGCACAGATGGACGCAGTT TCATCTCAGTCGAAGTCGAACTGTTTTGCTTGTTGTACCCTCTGTACAAG TAATTTCCTCACGTATTCTAGCTTTTCTACTGTACTCTAGTATTACATCG AGCGTATAAAGTTTGGTGGCTATGTCTAAAACACTGTACTTTAGTATTAC ATCGAGCGCATGAAGTTGTTTGGTGGCTATGCCTAAAACAACCTGTAGTT GGTTCGCGCTATGTAAACAACGGCTTCTGATTTGCCCGCGCTGTGTCTAT TACGCCCCGTAGCCTAAAACACTTGCCTATACTTTATGGAGCACTTAAAC ACGGCGGACGGTGCGCGCACTCGAGTTTAATGAGCACGCGAAAACGAGAT TCAAAAGGCAACAAAAAATGATACTGCGAGCGAAAGCTTTTGACGGCCCG CTCGTGACAAGTCTTGCTGTGTATGGTACACCAGTTTACGCAGTACATGC CAACAGGAAAACGGTTGATCACATGTTTTGACGTATTTTTCCTGGACCCT CCGACCAACTTTTTTCTGGAGGAAAAATGACGAGTGCCGCCATTCGACAG CTTGTACGTTACAACTCACCTCTAAACGGGTTCATCACGTAGGGGTGTAC CTTATTTTGTCACTTAGGGCCCGGAACTTTTATATTGATAGTGAGTTAAG ACACCGAAGAAGGGGGGAGGCTAAAACTGTTTCTTCGCATATCTTGTAGA TTTTTGGCAACAGCTGTCCGCCGATGGTGGAACCAAGAACTTCCGTACAG CACTCGTACGGTGTAGCATGTTCGGGAGATTATGCTCTTAACGTATCACA ATGAGTCTCCGTTCGTCCTTCCGTATGATAAAAACCGCCTGACTTTTCTT TTCGGTAGGAACCTACTCTGCGGAAGACAAAATTGCGTTCCACAAAGCTT CCATAAGAGAAGTCGCTTCCTCTGCTACCGTCCCTGGTGATGGCAACAAA AGCGCTACTGATACGACGTTGGAAGCCCGGGGGGAAAAGCACGAGGAAAG TTTCATTTCCGACGACCGTGAGCCTTCTTTCGTCTCACTCGTTCAAAATT CTTTGGCGGATGCAAAAATATCTGGTGACGGGAGGGAGATGGAGCGCTGC GAGGGGTGCGGAAGAACCTTCGCTCCAGGAAGGCTGCATTCGCACGCGAA GGC
back to top

Coding sequence (CDS) from alignment at F-serratus_M_contig1021:235262..243814-

>mRNA_F-serratus_M_contig1021.291.1 ID=mRNA_F-serratus_M_contig1021.291.1|Name=mRNA_F-serratus_M_contig1021.291.1|organism=Fucus serratus male|type=CDS|length=1716bp|location=Sequence derived from alignment at F-serratus_M_contig1021:235262..243814- (Fucus serratus male)
AAAGCTGTGCGCAATGAAAGCGGCATCAATTGTGGAACTCTACGAAAGCT
GTGCGCAATGAAAGCGGCATCAATTGTGGAACTCTACGCAACGAAGAAGA
TGGCATTGCGTCCACTCTTCCTCGAAGTGTCGCTGCAAAAGCCCCTGGAA
CCCCGCCCACAGCGATCCTCACCATTTCTAGAGATGGGGACATGGGTGCA
ACAGAATCGGAACTAGCGACCCGGAGCACTTCCCGTTTTGCGGCAGCACA
ATCACAGGCAAAGGAAAACCGTATAGAGTTGAGGACAGGGAACGGTGGAC
ATGATGGCGATCTTGAGGTAGAAGAGGGTTTGCCAGGGTCATCGGTGGTG
CGGCACAAGCAACGAAGAAGATGGCATTGCGTCCACTCTTCCTCGAAGTG
TCGCTGCAAAAGCCCCTGGAACCCCGCCCACAGCGATCCTCACCATTTCT
AGAGATGGGGACATGGGTGCAACAGAATCGGAACTAGCGACCCGGAGCAC
TTCCCGTTTTGCGGCAGCACAATCACAGGCAAAGGAAAACCGTATAGAGT
TGAGGACAGGGAACGGTGGACATGATGGCGATCTTGAGGTAGAAGAGGGT
TTGCCAGGGTCATCGGTGGTGCGGCACAAGGTACGAAGGCAACTCTTCAG
TGAGGCATCCGAGGCACGGCCTATGGTGTTTTGCCCCTTCTGCGGAGACG
GGGTTCTGGCCTCGGGAAGGCTGAGGGAACACCTCGAGGTACGAAGGCAA
CTCTTCAGTGAGGCATCCGAGGCACGGCCTATGGTGTTTTGCCCCTTCTG
CGGAGACGGGGTTCTGGCCTCGGGAAGGCTGAGGGAACACCTCGAGGCGT
GCTACGTCTTTGCCCGCTCCAGGGGAAGCCAGACACACTTTGAGGCGTGC
TACGTCTTTGCCCGCTCCAGGGGAAGCCAGACACACTTTGAGGTGGAGGC
TGCCGTAAGGGCGGTCTCGGGCAAGGGGAAAAAACCTGCGCTGCGTGCGA
AGGGAAGCTGCGACGAGGACCCTTGCGAAGTAGCAGGTGGAGGCTGCCGT
AAGGGCGGTCTCGGGCAAGGGGAAAAAACCTGCGCTGCGTGCGAAGGGAA
GCTGCGACGAGGACCCTTGCGAAGTAGCAGGAACCTACTCTGCGGAAGAC
AAAATTGCGTTCCACAAAGCTTCCATAAGAGAAGTCGCTTCCTCTGCTAC
CGTCCCTGGTGATGGCAACAAAAGCGCTACTGATACGACGTTGGAAGCCC
GGGGGGAAAAGCACGAGGAAAGTTTCATTTCCGACGACCGTGAGCCTTCT
TTCGTCTCACTCGTTCAAAATTCTTTGGCGGATGCAAAAATATCTGGTGA
CGGGAGGGAGATGGAGCGCTGCGAGGGGTGCGGAAGAACCTTCGCTCCAG
GAAGGCTGCATTCGCACGCGAAGGAACCTACTCTGCGGAAGACAAAATTG
CGTTCCACAAAGCTTCCATAAGAGAAGTCGCTTCCTCTGCTACCGTCCCT
GGTGATGGCAACAAAAGCGCTACTGATACGACGTTGGAAGCCCGGGGGGA
AAAGCACGAGGAAAGTTTCATTTCCGACGACCGTGAGCCTTCTTTCGTCT
CACTCGTTCAAAATTCTTTGGCGGATGCAAAAATATCTGGTGACGGGAGG
GAGATGGAGCGCTGCGAGGGGTGCGGAAGAACCTTCGCTCCAGGAAGGCT
GCATTCGCACGCGAAG
back to top