mRNA_F-serratus_M_contig14.2880.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig14.2880.1 vs. uniprot
Match: D8LCI4_ECTSI (Rhodanese domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCI4_ECTSI) HSP 1 Score: 241 bits (615), Expect = 4.620e-77 Identity = 128/194 (65.98%), Postives = 152/194 (78.35%), Query Frame = 1
Query: 1 SQVKTGRTVDTLTFVTTRQQLRRQDEPFFRLSPWDLSELLMEYEQASDLSRDRQEGVQDFRDHIDPDHHGPKVVEHEPDAVPSYERPYLILDVRELADFRRCHITQAYSLLALQARSFEAMSLKQDRMTPELYRFKNKEGGLVIVYSKDDKTASSAATILTQKGFNNVFVLSGGVVDFAKR-FQSFVEGDITAL 579
S+V+TG TVD +TFVTTRQ LRR++EP+FRL+P L+ELL EYEQ D+QEGVQDFRDHIDPDHHGPKVVE+EPDA PSY+RPYL+LDVR +F+RC I +QARSFEA L QDRMTPELY +KN+EGGLVI+YS DD A AA L +GF+N+FVLSGG+V FA+ FQSFVEGD+ AL
Sbjct: 32 SKVQTGMTVDKVTFVTTRQHLRRREEPYFRLTPSQLNELLSEYEQ------DQQEGVQDFRDHIDPDHHGPKVVEYEPDAKPSYDRPYLVLDVRSPEEFKRCRI--------VQARSFEAKLLNQDRMTPELYMYKNREGGLVILYSNDDADAGHAARTLIHRGFDNIFVLSGGLVAFAREGFQSFVEGDVEAL 211
BLAST of mRNA_F-serratus_M_contig14.2880.1 vs. uniprot
Match: A0A6H5JFI4_9PHAE (Rhodanese domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFI4_9PHAE) HSP 1 Score: 231 bits (590), Expect = 1.090e-71 Identity = 123/189 (65.08%), Postives = 146/189 (77.25%), Query Frame = 1
Query: 22 TVDTLTFVTTRQQLRRQDEPFFRLSPWDLSELLMEYEQASDLSRDRQEGVQDFRDHIDPDHHGPKVVEHEPDAVPSYERPYLILDVRELADFRRCHITQAYSLLALQARSFEAMSLKQDRMTPELYRFKNKEGGLVIVYSKDDKTASSAATILTQKGFNNVFVLSGGVVDFAKR-FQSFVEGDITALSP 585
TVD +TFVTTRQ LRR++EP+FRL+P L+ELL EYEQ D+QEGV DFRDHIDPDHHGPKVVE+EPDA PSY+RPYL+LDVR +F+RC I +QARSFEA L QDRMTPELY +KN+EGGLVI+YS DD A AA L +GF+N+FVLSGG+V FA+ FQSFVEG++ AL P
Sbjct: 2 TVDKVTFVTTRQHLRRREEPYFRLTPSQLNELLSEYEQ------DQQEGVHDFRDHIDPDHHGPKVVEYEPDAKPSYDRPYLVLDVRTPEEFKRCRI--------VQARSFEAKLLNQDRMTPELYMYKNREGGLVILYSNDDADACHAARTLIHRGFDNIFVLSGGLVAFAREGFQSFVEGNVEALPP 176
BLAST of mRNA_F-serratus_M_contig14.2880.1 vs. uniprot
Match: A0A835ZB11_9STRA (Rhodanese-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZB11_9STRA) HSP 1 Score: 153 bits (386), Expect = 5.390e-42 Identity = 85/188 (45.21%), Postives = 120/188 (63.83%), Query Frame = 1
Query: 1 SQVKTGRTVDTLTFVTTRQQLRRQDEPFFRLSPWDLSELLMEYEQASDLSRDRQEGVQDFRDHIDPDHHGPKVVEHEPDAVPSYERPYLILDVRELADFRRCHITQAYSLLALQARSFEAMSLKQDRMTPELYRFKNKEGGLVIVYSKDDKTASSAATILTQKGFNNVFVLSGGVVDFAKRFQSFVEG 564
S++ TG TVD + +VT ++ LRR+DEP++R++P L +LL EYEQ D QEGVQD DPD HGP VV + +A +Y+RPYLILD+R ++ + QA RSF + L QDRMT EL++FKN+EG L+++Y +++ A AA L +GF+NV+VLSGG+ F F+EG
Sbjct: 16 SRLDTGLTVDKVKYVTAKEFLRRRDEPYYRVTPGQLFDLLSEYEQ------DLQEGVQDMASKQDPDSHGPVVVTYTEEAEAAYDRPYLILDLRTPEEYTVHRVAQA--------RSFPIVMLNQDRMTAELFKFKNREGTLIVLYEDEERLACQAAQTLLHRGFDNVYVLSGGLQAFTHLHPDFIEG 189
BLAST of mRNA_F-serratus_M_contig14.2880.1 vs. uniprot
Match: A0A7S2V7G5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V7G5_9STRA) HSP 1 Score: 130 bits (326), Expect = 7.420e-34 Identity = 73/188 (38.83%), Postives = 113/188 (60.11%), Query Frame = 1
Query: 1 SQVKTGRTVDTLTFVTTRQQLRRQDEPFFRLSPWDLSELLMEYEQASDLSRDRQEGVQDFRDHIDPDHHGPKVVEHEPDAVPSYERPYLILDVRELADFRRCHITQAYSLLALQARSFEAMSLKQDRMTPELYRFKNKEGGLVIVYSKDDKTASSAATILTQKGFNNVFVLSGGVVDFAKRFQSFVEG 564
S++ TG TVD + +++T + L+R++E FFRLS L L EYE + + + G D GP+VV E D PSY+RPYL+LD+R ++ +CHI +QARSF L QD+M +LY++KNKEG L+++Y ++ +S A L +GF+N+F+L+GG+ F++ +VEG
Sbjct: 27 SRIDTGMTVDKVKYISTSEYLKRRNELFFRLSSNQLHALFAEYEADHEDVEENKGGGFD----------GPRVVTIEADEKPSYQRPYLLLDLRTQQEYTQCHI--------MQARSFPMQMLNQDKMIADLYQYKNKEGQLIVLYCDNEAISSQAGHTLVTRGFDNIFLLTGGLFTFSELHPLYVEG 196
BLAST of mRNA_F-serratus_M_contig14.2880.1 vs. uniprot
Match: A0A482S3N9_9ARCH (Rhodanese-like domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482S3N9_9ARCH) HSP 1 Score: 128 bits (322), Expect = 1.400e-32 Identity = 78/205 (38.05%), Postives = 118/205 (57.56%), Query Frame = 1
Query: 13 TGRTVDTLTFVTTRQQLRRQDEPFFRLSPWDLSELLMEYEQASDLSRDRQEGVQDFRDHIDPDHHGPKVVEHEPDAVPSYERPYLILDVRELADFRRCHITQAYSLLALQARSFEAMSLKQDRMTPELYRFKNKEGGLVIVYSKDDKTASSAATILTQKGFNNVFVLSGGVVDFAKRFQSFVEGDIT-----ALSPIAPLGRRPG 612
TG TV+ + VT R+ +R+DE FFR++ L EL EYEQ D E + + +D P+VV + + P Y +PYLILD+R+ D+ CH+ LQARSF L++D+ PE+YRF+NKE L+I+Y D+K + AA ++ +G +N+++LSGG+ FA + +FVEG++ +P GRR G
Sbjct: 20 TGVTVNKVKHVTAREYAKRRDEIFFRITRHQLYELYSEYEQ------DEYETISETHA-VDSK---PRVVTYHEEDKPVYTKPYLILDMRDTNDYNTCHL--------LQARSFPDTLLRRDQYHPEIYRFRNKEEHLIILYCNDEKISQEAAAVMVTRGIDNIYLLSGGLAQFAADYSAFVEGEVPRELVPVSTPSKATGRRLG 206
BLAST of mRNA_F-serratus_M_contig14.2880.1 vs. uniprot
Match: A0A7S3HNL5_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HNL5_9STRA) HSP 1 Score: 124 bits (310), Expect = 2.410e-30 Identity = 75/198 (37.88%), Postives = 112/198 (56.57%), Query Frame = 1
Query: 13 TGRTVDTLTFVTTRQQLRRQDEPFFRLSPWDLSELLMEYEQASDLSRDRQEGVQDFRDHIDPDHHGPKVVEHEPDAVPSYERPYLILDVRELADFRRCHITQAYSLLALQARSFEAMSLKQDRMTPELYRFKNKEGGLVIVYSKDDKTASSAATILTQKGFNNVFVLSGGVVDFAKRFQSFVEGDITALSPIAPLGRR 606
TG TV+ + F+T R+ +R+DE F+R++ L ELL EYE V ++ + ++ K+V + A P YE+PYLILDVREL F HI LQARSF L++D+M E+YRFKNK L+I+ D+K + +A ++ +G +NV++L+GG+ +FA + F+EG A A G R
Sbjct: 32 TGLTVEKVKFITAREYSKRRDEIFYRINKNQLFELLNEYE------------VDEYESIAETTNNSLKIVSYSETAGPVYEKPYLILDVRELDYFNEYHI--------LQARSFPYQMLRRDQMHSEVYRFKNKPETLIIICCDDEKISHESAKVMVDRGVDNVYLLTGGIHEFAYEYPQFIEGRPPAPPKAATRGPR 209
BLAST of mRNA_F-serratus_M_contig14.2880.1 vs. uniprot
Match: A0A662Y6U1_9STRA (Rhodanese domain-containing protein (Fragment) n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662Y6U1_9STRA) HSP 1 Score: 122 bits (305), Expect = 9.930e-30 Identity = 74/212 (34.91%), Postives = 115/212 (54.25%), Query Frame = 1
Query: 1 SQVKTGRTVDTLTFVTTRQQLRRQDEPFFRLSPWDLSELLMEYEQASDLSRDRQ--------------EGVQDFRDHIDPDHHGPKVVEHEPDAVPSYERPYLILDVRELADFRRCHITQAYSLLALQARSFEAMSLKQDRMTPELYRFKNKEGGLVIVYSKDDKTASSAATILTQKGFNNVFVLSGGVVDFAKRFQSFVEGDITALSPIAP 594
S+V +G TV+ + ++ ++ L+R+DE F R++ L+EL EYE SR E V D+ + GP++V ++ + Y+ PYL+LD R ++ I +A +SF A L +D + PE+++FKN E L+I+Y +DDKTA A IL Q+GF+NV+VLSGG+VD+A F +EG P+ P
Sbjct: 56 SKVDSGSTVNKVRLISHKEFLKRRDETFRRVTCRCLAELFNEYEDTGSASRPEMVARMVKGANGEFTMERVPASEDNNSEESCGPRIVSYDAEEKEDYDPPYLVLDTRTKEEYAANRIHRA--------KSFPASYLNRDVLLPEMHQFKNNEAKLIIIYDQDDKTAGQTAHILVQRGFDNVYVLSGGLVDYADEFPDHIEGTPLPRKPVDP 259
BLAST of mRNA_F-serratus_M_contig14.2880.1 vs. uniprot
Match: A0A485LDA1_9STRA (Aste57867_19479 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LDA1_9STRA) HSP 1 Score: 119 bits (298), Expect = 1.030e-28 Identity = 71/201 (35.32%), Postives = 118/201 (58.71%), Query Frame = 1
Query: 1 SQVKTGRTVDTLTFVTTRQQLRRQDEPFFRLSPWDLSELLMEYEQASD------------LSRDRQEGVQDFRDHID-PDHHGPKVVEHEPDAVPSYERPYLILDVRELADFRRCHITQAYSLLALQARSFEAMSLKQDRMTPELYRFKNKEGGLVIVYSKDDKTASSAATILTQKGFNNVFVLSGGVVDFAKRFQSFVEG 564
S++ TG TV+ + +++++ L+R+DE F R++P L++L EYE + + DR E V + + D +H GP++V +E + +Y+ PYLILD R DF I +A +SF L +D+ PE+++FKN E L+I+Y D+K + +AT+L QKGF+N++VLSGG+ ++A + + VEG
Sbjct: 33 SKLNTGNTVNNVRLISSKEFLKRRDETFRRVTPRCLADLFTEYEDTGNGDSNGPEMVARMVKNDRGEFVMERQMSEDNQEHAGPRIVSYEAEEGETYDAPYLILDTRPREDFTENRIHRA--------KSFPTAFLCRDQFLPEMHKFKNHESKLIILYCLDEKLSIQSATLLAQKGFDNIYVLSGGLAEYAALYPNHVEG 225
BLAST of mRNA_F-serratus_M_contig14.2880.1 vs. uniprot
Match: A0A7S3XJW4_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XJW4_HETAK) HSP 1 Score: 111 bits (277), Expect = 1.910e-27 Identity = 53/133 (39.85%), Postives = 85/133 (63.91%), Query Frame = 1
Query: 208 GPKVVEHEPDAVPSYERPYLILDVRELADFRRCHITQAYSLLALQARSFEAMSLKQDRMTPELYRFKNKEGGLVIVYSKDDKTASSAATILTQKGFNNVFVLSGGVVDFAKRFQSFVEGDITALSPIAPLGRR 606
GP++V E D P Y+RPY+I D+RE+ ++R+CHI LQAR+ L QD+M+ E+Y+FKNK+G L+I+Y D AA ++ +GF+N+++LSGG+ F++R +VEG + P+ P ++
Sbjct: 23 GPRMVTIEADEKPQYQRPYIIFDLREIDEYRQCHI--------LQARNHPFRLLNQDKMSAEMYQFKNKDGHLIILYDNDTSIVQQAAHVMCTRGFDNIYILSGGLYAFSERHPQYVEG----VPPVRPASQQ 143
BLAST of mRNA_F-serratus_M_contig14.2880.1 vs. uniprot
Match: A0A6G0XY95_9STRA (Rhodanese domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XY95_9STRA) HSP 1 Score: 115 bits (287), Expect = 2.070e-27 Identity = 70/203 (34.48%), Postives = 116/203 (57.14%), Query Frame = 1
Query: 1 SQVKTGRTVDTLTFVTTRQQLRRQDEPFFRLSPWDLSELLMEYEQASDLSRDRQEGV-------------QDFRDHIDPDHHGPKVVEHEPDAVPSYERPYLILDVRELADF--RRCHITQAYSLLALQARSFEAMSLKQDRMTPELYRFKNKEGGLVIVYSKDDKTASSAATILTQKGFNNVFVLSGGVVDFAKRFQSFVEG 564
S++ TG TV+ + +++++ L+R+DE F R++P +++L EYE + E V Q + DH GP++V ++ + +Y+ PYLILD R DF R H +A+SF L +D+ PE+ +FKN+E L+I+Y D+K +S +AT+L QKGF+N++VLSGG++++A + VEG
Sbjct: 16 SKLNTGNTVNNVRLISSKEFLKRRDETFRRVTPRCVADLFREYEDTGKGDANAPEMVARMVKDGDGNYVMQREASENNQDHTGPRIVSYDAEEGENYDVPYLILDTRPREDFVENRIH----------RAKSFPTAYLCRDQFLPEMLQFKNQESKLIILYCMDEKLSSQSATLLGQKGFDNIYVLSGGLMEYAALYPDHVEG 208 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig14.2880.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig14.2880.1 >prot_F-serratus_M_contig14.2880.1 ID=prot_F-serratus_M_contig14.2880.1|Name=mRNA_F-serratus_M_contig14.2880.1|organism=Fucus serratus male|type=polypeptide|length=221bp SQVKTGRTVDTLTFVTTRQQLRRQDEPFFRLSPWDLSELLMEYEQASDLSback to top mRNA from alignment at F-serratus_M_contig14:224752..226784- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig14.2880.1 ID=mRNA_F-serratus_M_contig14.2880.1|Name=mRNA_F-serratus_M_contig14.2880.1|organism=Fucus serratus male|type=mRNA|length=2033bp|location=Sequence derived from alignment at F-serratus_M_contig14:224752..226784- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig14:224752..226784- >mRNA_F-serratus_M_contig14.2880.1 ID=mRNA_F-serratus_M_contig14.2880.1|Name=mRNA_F-serratus_M_contig14.2880.1|organism=Fucus serratus male|type=CDS|length=1326bp|location=Sequence derived from alignment at F-serratus_M_contig14:224752..226784- (Fucus serratus male)back to top |