prot_F-serratus_M_contig1.22.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_F-serratus_M_contig1.22.1
Unique Name	prot_F-serratus_M_contig1.22.1
Type	polypeptide
Organism	Fucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length	178

Homology

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BLAST of mRNA_F-serratus_M_contig1.22.1 vs. uniprot
Match: A0A6H5KV05_9PHAE (2Fe-2S ferredoxin-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KV05_9PHAE)

HSP 1 Score: 178 bits (452), Expect = 2.690e-54
Identity = 93/151 (61.59%), Postives = 112/151 (74.17%), Query Frame = 0

Query:   29 VALARLSEGFVLRG-----GSPALLTASRARGLARPKRERAVPRPVTDMQMHKVTIEHEGKTRVLEVSESTTILDAALDNGIELPHDCKLGVCLTCPAKVVSGEVDQSDGTLDDSVVEQGFALTCCAYPRSDVVIQSIEEDQLVGAQFSDR 174
            +AL  ++ GFV  G      + A L  SR     R  R+  +    + +QMH+VTIEHEG + VLEV E+TTIL+AALDN I+LPHDCKLGVCLTCP+KVVSGEVDQSDGTL+DSV   G+ALTCC Y RSDV I+S+EED+LVGAQFSDR
Sbjct:   13 LALMGVTRGFVPYGTPAIRSAAATLGGSRTSDSTRRARQETLRPTFSALQMHQVTIEHEGTSTVLEVDENTTILEAALDNDIDLPHDCKLGVCLTCPSKVVSGEVDQSDGTLEDSVTALGYALTCCTYARSDVTIRSVEEDELVGAQFSDR 163

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BLAST of mRNA_F-serratus_M_contig1.22.1 vs. uniprot
Match: A0A7S2V4F7_9STRA (Ferredoxin n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V4F7_9STRA)

HSP 1 Score: 172 bits (436), Expect = 5.100e-52
Identity = 91/151 (60.26%), Postives = 113/151 (74.83%), Query Frame = 0

Query:   25 LAVVVALARLSEGFVLRGGSPALLTASRARGLARPKRERAVPRPVTDMQMHKVTIEHEGKTRVLEVSESTTILDAALDNGIELPHDCKLGVCLTCPAKVVSGEVDQSDGTLDDSVVEQGFALTCCAYPRSDVVIQSIEEDQLVGAQFSDRV 175
            L V+ A+A   EGF      P    +S +  L+R   +R VP+       H+VTI+HEGK  VLEV ESTTIL+AALD GI+LPHDC+LGVCLTCP+++VSGEVDQ  GTLDDSVVEQGFALTC +YPRSD V++S+EED++V AQF+DRV
Sbjct:   11 LGVLAAIAATGEGFATHNLKPVSWRSSPS-SLSR---QRLVPKA------HQVTIQHEGKDTVLEVDESTTILEAALDAGIDLPHDCQLGVCLTCPSRIVSGEVDQGMGTLDDSVVEQGFALTCISYPRSDCVVRSVEEDEMVNAQFADRV 151

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BLAST of mRNA_F-serratus_M_contig1.22.1 vs. uniprot
Match: A0A836CGC2_9STRA (2Fe-2S ferredoxin-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CGC2_9STRA)

HSP 1 Score: 165 bits (418), Expect = 2.930e-49
Identity = 85/155 (54.84%), Postives = 111/155 (71.61%), Query Frame = 0

Query:   20 SLAWALAVVVALARLSEGFVLRGGSPALLTASRARGLARPKRERAVPRPVTDMQMHKVTIEHEGKTRVLEVSESTTILDAALDNGIELPHDCKLGVCLTCPAKVVSGEVDQSDGTLDDSVVEQGFALTCCAYPRSDVVIQSIEEDQLVGAQFSDR 174
            S+A A A    +   + GFV+   S +++   R       ++  +V R    + MH+VTIE  GK+  LEV E T++L+AALD GIELPHDCKLGVCLTCP+K+VSGEVDQ   TLDDSVVEQG+ALTCC++PRSD+VI++I+ED+LVGAQF  R
Sbjct:    7 SMALAGACGAVMVSAAAGFVMPSASRSIVAQQR-------RQTNSVARRPRGLYMHQVTIEVAGKSHTLEVDEKTSVLEAALDAGIELPHDCKLGVCLTCPSKIVSGEVDQDGTTLDDSVVEQGYALTCCSFPRSDLVIRAIDEDELVGAQFEGR 154

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BLAST of mRNA_F-serratus_M_contig1.22.1 vs. uniprot
Match: A0A7S3UW21_HETAK (Ferredoxin n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UW21_HETAK)

HSP 1 Score: 160 bits (405), Expect = 1.830e-47
Identity = 82/117 (70.09%), Postives = 91/117 (77.78%), Query Frame = 0

Query:   58 RPKRERAVPRPVTDMQMHKVTIEHEGKTRVLEVSESTTILDAALDNGIELPHDCKLGVCLTCPAKVVSGEVDQSDGTLDDSVVEQGFALTCCAYPRSDVVIQSIEEDQLVGAQFSDR 174
            R K  R VP+       H+VTIEHEG T VLEV E T+ILDAALD GI+LPHDCKLGVCLTCP+KVVSGEVDQSDGTL+DSV  QG+ALTC  +PRSD  I SI ED+LV AQFS R
Sbjct:   31 RVKSSRIVPKA------HQVTIEHEGTTTVLEVPEYTSILDAALDAGIDLPHDCKLGVCLTCPSKVVSGEVDQSDGTLEDSVTAQGYALTCMTFPRSDCTIMSITEDELVDAQFSGR 141

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BLAST of mRNA_F-serratus_M_contig1.22.1 vs. uniprot
Match: A0A482SDV3_9ARCH (2Fe-2S iron-sulfur cluster binding domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SDV3_9ARCH)

HSP 1 Score: 146 bits (368), Expect = 7.710e-42
Identity = 68/105 (64.76%), Postives = 87/105 (82.86%), Query Frame = 0

Query:   68 PVTDMQMHKVTIEHEGKTRVLEVSESTTILDAALDNGIELPHDCKLGVCLTCPAKVVSGEVDQSDGTLDDSVVEQGFALTCCAYPRSDVVIQSIEEDQLVGAQFS 172
            P    + +KVTI+HEGK  +L+V +  +IL+AALD GI+LPHDCKLGVCLTCP+K+VSG+VDQSDGTL  SV  +G+ALTC ++P SDVV++SIEED+LV AQFS
Sbjct:   36 PSLHAKTYKVTIQHEGKDTILDVQDDCSILNAALDAGIDLPHDCKLGVCLTCPSKIVSGKVDQSDGTLAKSVQAKGYALTCVSFPCSDVVVRSIEEDELVSAQFS 140

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BLAST of mRNA_F-serratus_M_contig1.22.1 vs. uniprot
Match: A0A2T7C2X2_9POAL (Ferredoxin n=6 Tax=Paniceae TaxID=147428 RepID=A0A2T7C2X2_9POAL)

HSP 1 Score: 139 bits (349), Expect = 5.990e-39
Identity = 68/116 (58.62%), Postives = 85/116 (73.28%), Query Frame = 0

Query:   57 ARPKRERAVPRPVTDMQMHKVTIEHEGKTRVLEVSESTTILDAALDNGIELPHDCKLGVCLTCPAKVVSGEVDQSDGTLDDSVVEQGFALTCCAYPRSDVVIQSIEEDQLVGAQFS 172
            ARP+  R  P P    + +KVTIEH G++RV+EV    TIL  ALD G+++PHDCKLGVC+TCPA++VSGEVDQSDG L D VV QG+AL C AYPRSD  I+ I ED+L+  Q +
Sbjct:   29 ARPRGARLAPPP----RAYKVTIEHGGESRVVEVEWDETILSRALDEGLDVPHDCKLGVCMTCPARLVSGEVDQSDGMLSDDVVAQGYALLCAAYPRSDCTIRVIPEDELLQVQLA 140

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BLAST of mRNA_F-serratus_M_contig1.22.1 vs. uniprot
Match: Q850T5_ORYSJ (Ferredoxin n=11 Tax=Oryza TaxID=4527 RepID=Q850T5_ORYSJ)

HSP 1 Score: 137 bits (346), Expect = 1.870e-38
Identity = 66/110 (60.00%), Postives = 83/110 (75.45%), Query Frame = 0

Query:   63 RAVPRPVTDMQMHKVTIEHEGKTRVLEVSESTTILDAALDNGIELPHDCKLGVCLTCPAKVVSGEVDQSDGTLDDSVVEQGFALTCCAYPRSDVVIQSIEEDQLVGAQFS 172
            RA P P    + +KVTIEH G++RV+EV E  TIL  ALD GI++PHDCKLGVC+TCPA++V+GEVDQSDG L D VV QG+AL C +YPRSD  I+ I ED+L+  Q +
Sbjct:   35 RAAPAPPPP-RAYKVTIEHGGESRVVEVEEGETILSRALDEGIDVPHDCKLGVCMTCPARLVAGEVDQSDGMLSDDVVAQGYALLCASYPRSDCTIRVIPEDELLKVQLA 143

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BLAST of mRNA_F-serratus_M_contig1.22.1 vs. uniprot
Match: A0A1E5VA51_9POAL (Ferredoxin n=1 Tax=Dichanthelium oligosanthes TaxID=888268 RepID=A0A1E5VA51_9POAL)

HSP 1 Score: 137 bits (346), Expect = 2.040e-38
Identity = 67/115 (58.26%), Postives = 84/115 (73.04%), Query Frame = 0

Query:   58 RPKRERAVPRPVTDMQMHKVTIEHEGKTRVLEVSESTTILDAALDNGIELPHDCKLGVCLTCPAKVVSGEVDQSDGTLDDSVVEQGFALTCCAYPRSDVVIQSIEEDQLVGAQFS 172
            RP+  R V  P    + +KVTIEH  ++RV+EV E  TIL  ALD G+++PHDCKLGVC+TCPA++VSGEVDQSDG L D VV QG+AL C AYPRSD  I+ I ED+L+  Q +
Sbjct:   33 RPQEARLVAAPAPP-RAYKVTIEHGNESRVVEVEEDETILSRALDEGLDVPHDCKLGVCMTCPARLVSGEVDQSDGMLSDDVVAQGYALLCAAYPRSDCTIRVIPEDELLQVQLA 146

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BLAST of mRNA_F-serratus_M_contig1.22.1 vs. uniprot
Match: A0A833QE95_9POAL (Ferredoxin, root R-B2 n=1 Tax=Carex littledalei TaxID=544730 RepID=A0A833QE95_9POAL)

HSP 1 Score: 137 bits (344), Expect = 3.320e-38
Identity = 67/122 (54.92%), Postives = 87/122 (71.31%), Query Frame = 0

Query:   51 SRARGLARPKRERAVPRPVTDMQMHKVTIEHEGKTRVLEVSESTTILDAALDNGIELPHDCKLGVCLTCPAKVVSGEVDQSDGTLDDSVVEQGFALTCCAYPRSDVVIQSIEEDQLVGAQFS 172
            SR   ++ P R+R  P P      +KVTIEHEG TR+L+V    +IL+ ALD G+ +PHDCKLGVC+TCPA++VSG VDQSDG L D VV+QG+AL C +YPRSD  IQ I E++L+  Q +
Sbjct:   23 SRPLRISLPPRQRGPPPP-----SYKVTIEHEGSTRILDVDPEESILERALDEGMSVPHDCKLGVCMTCPARLVSGVVDQSDGMLSDDVVDQGYALLCASYPRSDCHIQVIPEEELLSLQLA 139

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BLAST of mRNA_F-serratus_M_contig1.22.1 vs. uniprot
Match: UPI001ADA50ED (ferredoxin C 1, chloroplastic n=1 Tax=Oryza brachyantha TaxID=4533 RepID=UPI001ADA50ED)

HSP 1 Score: 135 bits (341), Expect = 9.160e-38
Identity = 64/109 (58.72%), Postives = 83/109 (76.15%), Query Frame = 0

Query:   64 AVPRPVTDMQMHKVTIEHEGKTRVLEVSESTTILDAALDNGIELPHDCKLGVCLTCPAKVVSGEVDQSDGTLDDSVVEQGFALTCCAYPRSDVVIQSIEEDQLVGAQFS 172
            A+P P    + ++VTIEH G++RV+EV E  TIL  ALD GI++PHDCKLGVC+TCPA++V+GEVDQSDG L D VV QG+AL C +YPRSD  I+ I ED+L+  Q +
Sbjct:   34 ALPAP----RAYRVTIEHGGESRVVEVGEDETILSRALDEGIDVPHDCKLGVCMTCPARLVAGEVDQSDGMLSDDVVAQGYALLCASYPRSDCTIRVIPEDELLQVQLA 138

The following BLAST results are available for this feature:

BLAST of mRNA_F-serratus_M_contig1.22.1 vs. uniprot

BLAST of mRNA_F-serratus_M_contig1.22.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5KV05_9PHAE	2.690e-54	61.59	2Fe-2S ferredoxin-type domain-containing protein n...	[more]
A0A7S2V4F7_9STRA	5.100e-52	60.26	Ferredoxin n=1 Tax=Fibrocapsa japonica TaxID=94617...	[more]
A0A836CGC2_9STRA	2.930e-49	54.84	2Fe-2S ferredoxin-type domain-containing protein n...	[more]
A0A7S3UW21_HETAK	1.830e-47	70.09	Ferredoxin n=1 Tax=Heterosigma akashiwo TaxID=2829...	[more]
A0A482SDV3_9ARCH	7.710e-42	64.76	2Fe-2S iron-sulfur cluster binding domain-containi...	[more]
A0A2T7C2X2_9POAL	5.990e-39	58.62	Ferredoxin n=6 Tax=Paniceae TaxID=147428 RepID=A0A...	[more]
Q850T5_ORYSJ	1.870e-38	60.00	Ferredoxin n=11 Tax=Oryza TaxID=4527 RepID=Q850T5_...	[more]
A0A1E5VA51_9POAL	2.040e-38	58.26	Ferredoxin n=1 Tax=Dichanthelium oligosanthes TaxI...	[more]
A0A833QE95_9POAL	3.320e-38	54.92	Ferredoxin, root R-B2 n=1 Tax=Carex littledalei Ta...	[more]
UPI001ADA50ED	9.160e-38	58.72	ferredoxin C 1, chloroplastic n=1 Tax=Oryza brachy...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001041	2Fe-2S ferredoxin-type iron-sulfur binding domain	PFAM	PF00111	Fer2	coord: 80..152 e-value: 9.9E-16 score: 57.5
IPR001041	2Fe-2S ferredoxin-type iron-sulfur binding domain	PROSITE	PS51085	2FE2S_FER_2	coord: 75..164 score: 12.745
IPR010241	Ferredoxin [2Fe-2S], plant	TIGRFAM	TIGR02008	TIGR02008	coord: 75..166 e-value: 7.4E-27 score: 91.0
IPR012675	Beta-grasp domain superfamily	GENE3D	3.10.20.30		coord: 60..169 e-value: 3.2E-27 score: 96.6
None	No IPR available	PANTHER	PTHR43112:SF9	FERREDOXIN C 1, CHLOROPLASTIC	coord: 67..171
None	No IPR available	PANTHER	PTHR43112	FAMILY NOT NAMED	coord: 67..171
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_C_REGION	Signal peptide C-region	coord: 33..37
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_N_REGION	Signal peptide N-region	coord: 1..20
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_H_REGION	Signal peptide H-region	coord: 21..32
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 38..177
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE	Signal Peptide	coord: 1..37
None	No IPR available	TMHMM	TMhelix		coord: 13..32
IPR036010	2Fe-2S ferredoxin-like superfamily	SUPERFAMILY	54292	2Fe-2S ferredoxin-like	coord: 68..164

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
F-serratus_M_contig1	contig	F-serratus_M_contig1:684613..703334 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Fucus serratus MALE	2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90	2022-09-16
OGS1.0 of Fucus serratus male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_F-serratus_M_contig1.22.1	mRNA_F-serratus_M_contig1.22.1	Fucus serratus male	mRNA	F-serratus_M_contig1 684531..703526 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_F-serratus_M_contig1.22.1 ID=prot_F-serratus_M_contig1.22.1|Name=mRNA_F-serratus_M_contig1.22.1|organism=Fucus serratus male|type=polypeptide|length=178bp
MVARASMGWQRKTRIAGAWSLAWALAVVVALARLSEGFVLRGGSPALLTA
SRARGLARPKRERAVPRPVTDMQMHKVTIEHEGKTRVLEVSESTTILDAA
LDNGIELPHDCKLGVCLTCPAKVVSGEVDQSDGTLDDSVVEQGFALTCCA
YPRSDVVIQSIEEDQLVGAQFSDRVTS*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR001041	2Fe-2S_ferredoxin-type
IPR010241	Fd_pln
IPR012675	Beta-grasp_dom_sf
IPR036010	2Fe-2S_ferredoxin-like_sf