mRNA_F-serratus_M_contig1020.285.1 (mRNA) Fucus serratus male
Overview
Homology
BLAST of mRNA_F-serratus_M_contig1020.285.1 vs. uniprot
Match: A0A6H5JBJ1_9PHAE (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBJ1_9PHAE) HSP 1 Score: 162 bits (409), Expect = 3.070e-38 Identity = 123/421 (29.22%), Postives = 190/421 (45.13%), Query Frame = 2 Query: 2 PAIGLVGTTENSLLGAYFECMDFIPLARQSTVREGMVRILTACRTP---------------TAIASRTGETARNILQPDPSLSSFWFAVAMGGLVQGRPKEAVETYVWRAKAAVEACSDVSKPDLARAWLQVAMMHALSGDRDGFREYSERAHNVVEDLKAQGSLAQIQPGLVDVAIHLQTIRLLMENYTSQEELQSFINADLGPSPQVGDAVTLEQMSRF------CFHALRRQGQAFYADTSKPRDYHVDVLPDDANMDTPPMGESSRQIEHELEPT--------YERLEDAIERSSIGLGVGGLAINVPLSMIRIARQDWSGAADRASRGAEVLLRYPGLMRFEM-GMHSCHLFLTILFVLKSS---QLFEKLRIAYNDHRSLGP-EVPPMEEWRGVQSYCSNQFCRVGRQTILERSL 1162 PA GLVG EN+ L +F C+ F+PL S +R MVR++T P AI + G T + L PS +FW AV +G LV G P E V Y A+ A+ A + ++A+AW + + GD F+EY + + + D +GS + G ++ H QT+++ N + F+ A PQ A T + R+ F L + + T +P + DD +P + + T +E L++A++RS+I G+GGL IN+ L++ + + D GA +R EV RYPG+ R M H H L L + S +L+++LR YN RS PP+EEWRG+ ++C + CR I ++L Sbjct: 105 PATGLVGMQENAFLSDFFGCVGFLPLTTPSHIRGEMVRMMTLSTAPHQLGASYDSPEQCQFDAILTEDGITTGSQLSTGPSACTFWCAVGVGALVNGSPVELVGNYSGLARDALNAYTGPVNAEVAKAWAILGYFYGFMGDTTTFQEYLGLSDSFLTDSIERGSTDILPAGFAEIIRHKQTVKVYAGNLDAA--YIDFLGARRRDPPQANPAATELDVFRYVTQSHTAFEQLVFEKVCENSATIRPLS-DDEPCEDDGGCGSPHGNPPQAEEVSDAMVTGLRDGLIDFEHLQEAVDRSNIRQGIGGLLINMNLALQKAGKGDAGGALERLRHCVEVFERYPGVCRCMMLWCHVSHSILGALAAINDSRARELYDRLRNVYNPSRSSDSLPAPPLEEWRGMSAFCDDFQCRCFEGIIASQAL 522
BLAST of mRNA_F-serratus_M_contig1020.285.1 vs. uniprot
Match: D7FTE0_ECTSI (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTE0_ECTSI) HSP 1 Score: 127 bits (319), Expect = 1.120e-26 Identity = 114/450 (25.33%), Postives = 174/450 (38.67%), Query Frame = 2 Query: 2 PAIGLVGTTENSLLGAYFECMDFIPLARQSTVREGMVRILTACRTPTAIASRTGE-------------------TARNILQPDPSLSSFWFAVAMGGLVQGRPKEAVETYVWRAKAAVEACSDVSKPDLARAWLQVAMMHALSGDRDGFREYSERAHNVVEDLKAQG-----------------SLAQIQPG-----LVDVAIHLQTIR---------------LLMENYTSQEELQSFINADLGPSPQVGDAVTLEQMSRFCFHALRRQGQAFYADTSKPRDYHVDVLPDDANM--------DTPPMGESSRQIEHELEPTYERLEDAIERSSIGLGVGGLAINVPLSMIRIARQDWSGAADRASRGAEVLLRYPGLMRFEMGMHSCHLFLTILFVLKSSQLFEKLRIAYNDHRSLG-PEVPPMEEWRGVQSYCSNQFCRVGRQTILER 1156 PA GLVG EN L +F C +PL +STVR MV ++ A + G R+ L P+ W A+A+G L++G E V YV A ++ C D + ARA+L ++ +H + GD D Y A N+V L+ + S QPG D A+ L +R L+ + SQ + +A P+ G A E+ + R G + + V DD + D PP G + ++ E P L +E S GVGG+ + ++ +R D + + +V+LRYPGL+RF H H L +++ +R YN +G P++PP EEWR ++ C + CR L+R Sbjct: 171 PATGLVGMPENGFLCDFFGCFGILPLTTESTVRNAMVEVMMRQCGGQAYSGTGGSGMEGLAEDEEKDWHGGGALARRHTLPDHPAKCMMWCAIALGALMRGISVEHVMGYVQLAWKSLTECFDGRSVEHARAYLIMSFLHRVIGDEDKNERYMSFAVNIVSKLRPEDVPKELGLMLMTTDKLRVSACNPQPGDDLSTSCDEALELPQVREAQHPLTPTDVTNVFLVADGLLSQAFIADMTSAGAIPASGGGAAPHEEKGEPVLGESYRELGGGGVMEEGGKQVRSAGVACDDEELANRSHREPDVPPTGPAMKRFAREALPEMTSLAKTLESSDTCSGVGGVLYHGNVAYMRAIAGDLDKSFESLQACVDVVLRYPGLVRFRS--HLIHCMLAASHFFNRRDMYDAMRGVYNSVGPMGYPQIPPYEEWRTIRQVCPHVMCRSMEAERLQR 618
BLAST of mRNA_F-serratus_M_contig1020.285.1 vs. uniprot
Match: A0A6H5L0K0_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0K0_9PHAE) HSP 1 Score: 108 bits (270), Expect = 1.100e-20 Identity = 117/468 (25.00%), Postives = 177/468 (37.82%), Query Frame = 2 Query: 2 PAIGLVGTTENSLLGAYFECMDFIPLARQSTVREGMVRILTACRTPTAIASRTGETA--------------------RNILQPDPSLSSFWFAVAMGGLVQGRPKEAVETYVWRAKAAVEACSDVSKPDLARAWLQVAMMHALSGDRDGFREYSERAHNVVEDLKAQG-----------------SLAQIQPG-----LVDVAIHLQTIRLLMENYTSQEELQSFINADLGPSPQVGDAVTLEQMSRFCFHALRRQGQAFYADTSKPR---DYH-----------------VDVLPDDANM--------DTPPMGESSRQIEHELEP-------TYERLEDAIERSSIGLGVGGLAINVPLSMIRIARQDWSGAADRASRGAEVLLRYPGLMRFEMGMHSCHLFLTILFVLKSSQLFEKLRIAYNDHRSLG-PEVPPMEEWRGVQSYCSNQFCRVGRQTILERSLVNV 1171 PA GLVG EN L +F C+ +PL +STVR MV ++ + + S TG + R+ L P+ W A+A+G L++G P E V YV A+ ++ C D + ARA+L V+ +H +R Y A N+ L+ + S QPG D A+ L +R T + F+ AD + A + S A R G A + + +P Y V DD + D PP G + ++ E P T ER R+S+ + G + + +R + A + +V+LRYPGL+RF H H L +++ +R YN +G P+VPP EEWR ++ C + C R +L NV Sbjct: 172 PATGLVGMPENGFLCDFFGCLGILPLTTESTVRNAMVEVMMR-QCGGQVYSGTGGSGMEGLAEDEEKGWRGGGALARRHTLPDHPAKCMMWCAIALGALMRGVPVERVTGYVQLARESLADCFDGRSVEHARAYLIVSFLHRGKNER-----YMSLAVNIASKLRPEDVPKELWLMLMTTDNLRVSACNPQPGDDLSTSCDEALELPQVREAQHPLTPTDVSNVFLAAD----SLLSQAFVADMTSAGAITASGR-GAAPHEENGEPALGDSYRELGGGGVMEEGGKQVRSAGVACDDEELANRLHREPDVPPTGPAMKRFAREALPEMTSLAKTLERFVPTRARASVVFSITGDNV----AYMRAVAGELVKAFESLEACVDVVLRYPGLVRFRRTSHLIHCMLAASHFFNRRDMYDAMRGVYNSVGPMGYPQVPPYEEWRTIRQVCPHILCSF-RTDLLPPRCSNV 623
BLAST of mRNA_F-serratus_M_contig1020.285.1 vs. uniprot
Match: D7FTD9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTD9_ECTSI) HSP 1 Score: 97.1 bits (240), Expect = 2.880e-17 Identity = 102/414 (24.64%), Postives = 165/414 (39.86%), Query Frame = 2 Query: 29 ENSLLGAYFECMDFIPLARQSTVREGMVRIL-----------TACRTPTAIA-------SRTGETARNILQPD-PSLSSFWFAVAMGGLVQGRPKE--AVETYVWRAKAAVEACSDVSKPDLARAW---------LQVAMMHALSGDRDGFREYSERAHNVVEDLKAQGSLAQIQPGLVDVAIHLQTIRLLMENYTSQEELQSFINADLGPSPQVGDAVTLEQMSRFCFHALRRQGQAFYADTSKPRDYHVDVLPDDANM--------DTPPMGESSRQIEHELEPTYERLEDAIERSSIGLGVGGLAINVPLSMIRIARQDWSGAADRASRGAEVLLRYPGLMRFEMGMHSCHLFLTILFVLKSSQLFEKLRIAYNDHRSLG-PEVPPMEEWRGVQSYCSNQFCRVGRQTILE 1153 EN LG +F C+ +PL +STVR MV ++ T +A S G AR PD P+ W A+A+G L++G P E E Y+ AV S + D+ + L+V+ + GD + S VE + + + + P V A L ++ ++ + ++A P+ G A E + R G + + R ++ DV +D + D PP G + + + E P L +E S G GG+ + ++ +R D A + +V+LRYPGL+RF H H L +++ +R YN +G P++PP EEWR ++ C + CR IL+ Sbjct: 3 ENGFLGDFFGCLGVLPLTTESTVRNAMVEVMMRQCGGQAYSGTGGSGMEGLAEDEEKGWSGGGALARRHTLPDHPAKCMMWCAIALGALMRGIPVEHDKNERYL---SFAVNIVSKLRPEDVPKELGLMLMTTDKLRVSPCNQPPGD-----DLSTSCGEAVELPRVREAQHLLTPTDVSNAF------LAADSLITRAFVADMMSAGAIPASGGGAAPHEENGEPVLGKSYRELGGGGVMEEGRKRMWNADVAWEDEELGNQVHREPDVPPAGSAMKLLIREALPEMASLAKTLESSDTCSGAGGVLYHGNVAYMRAIAGDLDKAFESLQACVDVVLRYPGLVRFRS--HLIHCMLAASHFFNRRDMYDAMRGVYNSVGPMGYPQIPPYEEWRTIRQVCPHVLCRSMEAEILQ 400
BLAST of mRNA_F-serratus_M_contig1020.285.1 vs. uniprot
Match: A0A6H5L0W7_9PHAE (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0W7_9PHAE) HSP 1 Score: 96.3 bits (238), Expect = 7.770e-17 Identity = 95/394 (24.11%), Postives = 155/394 (39.34%), Query Frame = 2 Query: 161 GETARNILQPD-PSLSSFWFAVAMGGLVQGRPKEAVETYVWRAKAAVEACSDVSKPDLARAWLQVAMMHALSGDR---DGFREYSERAHNVVEDLKAQGSLAQI-----------------QPG-----LVDVAIHLQTIRLLMENYTSQEELQSFINADLGPSPQVGDAVTLEQMSRFCFHA-------------------LRRQGQAFYADTSKPRDYHVDVLPDDANM--------DTPPMGESSRQIEHELEPTYERLEDAIERSSIGLGVGGLAINVPLSMIRIARQDWSGAADRASRGAEVLLRYPGLMRFEMGMHSCHLFLTILFVLKSSQLFEKLRIAYNDHRSLG-PEVPPMEEWRGVQSYCSNQFCR---VGRQTILERSLVNV 1171 G AR PD P+ W A+A+G L++G P E V YV A+ ++ C D + ARA+L ++ +H++ D+ D Y A N+V L+ + ++ QPG D A+ L +R T + +F+ AD + A + MS A R G + R+++ V + + D PP G + + + E P L +E S GVGG+ + ++ +R + A + +V+LRYPGL+RF+ H H L +++ ++ YN +G P+ PP EEWR ++ C + CR V L+ LV Sbjct: 242 GALARRHTLPDHPAKCMMWCAIALGALMRGVPVERVTGYVQLARESLADCFDGRSVEHARAYLIMSFLHSIIHDKAIDDKNERYLSFAVNIVSKLRPEDVPKELGLMLVTTNKLRVCPCNPQPGDDLSTSCDEAVELPRVREAQHPLTPTDVSNAFLAAD----SLITRAFVADMMSAGAITASGGGAAPHEENGEPVLGGSYRELGGGGVMEEGGKREWNAGVTWEGEELANRVHREPDVPPAGPAMKLLIQEALPEMTSLAKTLESSDTCSGVGGVLYHGNVAYMRAVAGELVKAFESLEACVDVVLRYPGLVRFKS--HLIHCMLAASHFFNRRDMYDAMKRVYNSVGPMGYPQAPPYEEWRTIRQVCPHILCRSLEVELHQHLDEGLVQA 629
BLAST of mRNA_F-serratus_M_contig1020.285.1 vs. uniprot
Match: A0A6H5KED9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KED9_9PHAE) HSP 1 Score: 89.0 bits (219), Expect = 5.230e-16 Identity = 45/126 (35.71%), Postives = 72/126 (57.14%), Query Frame = 2 Query: 776 YERLEDAIERSSIGLGVGGLAINVPLSMIRIARQDWSGAADRASRGAEVLLRYPGLMRFEMGMHSCHLFLTILFVL---KSSQLFEKLRIAYNDHRSLGPE-VPPMEEWRGVQSYCSNQFCRVGRQ 1141 +E LE+A++R S+ G+G L +N L + A+ D GA R R E+ RYPGL R +G H H+ L L + ++ + ++LR +YN G +PP+EEWRG+ ++C + +CR G + Sbjct: 117 FEPLEEAVDRPSVRGGIGSLQVNSTLVFKKAAKGDLHGALKRIGRCVEIFERYPGLCRSMIGCHLAHMMLVSLAAIGTPRAQAMHDRLRESYNSCCPSGSRLIPPLEEWRGLDAFCDDLYCRHGNR 242
BLAST of mRNA_F-serratus_M_contig1020.285.1 vs. uniprot
Match: D7FTD6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTD6_ECTSI) HSP 1 Score: 79.0 bits (193), Expect = 1.150e-11 Identity = 47/148 (31.76%), Postives = 71/148 (47.97%), Query Frame = 2 Query: 689 VDVLPDDANMDTPPMGESSRQIEHELEPTYERLEDAIERSSIGLGVGGLAINVPLSMIRIARQDWSGAADRASRGAEVLLRYPGLMRFEMGMHSCHLFLTILFVLKSSQLFEKLRIAYNDHRSLGP-EVPPMEEWRGVQSYCSNQFCR 1129 VD L D+ + PP G + ++ E P RL +ERS++ GVGGL + ++ ++ D A+++LRYPG++RF H H L + K +++ + YN R G PP EEWR + C N FCR Sbjct: 142 VDSLHDEPEV--PPSGAAMKRFVQETLPEMTRLTKTLERSNVCSGVGGLFYHSNVAYMKTVNGDVEDLIKCLQASADIVLRYPGIVRFRP--HFIHCTLAVSHFSKRRDMYDAMNGVYNSIRPPGCWRAPPYEEWRTITQICDNMFCR 285
BLAST of mRNA_F-serratus_M_contig1020.285.1 vs. uniprot
Match: A0A836CD00_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CD00_9STRA) HSP 1 Score: 54.7 bits (130), Expect = 4.320e-5 Identity = 41/135 (30.37%), Postives = 64/135 (47.41%), Query Frame = 2 Query: 5 AIGLVGTTENSLLGAYFECMDFIPLARQSTVREGMVRILTACRTP--TAIASRTGETARNILQPDPSLSSFWFAVAMGGLVQG-RPKEAVETYVWRAKAAVEACSDVSKPDLARAWLQVAMMHALSGDRDGFREY 400 A GL+G EN+ L Y C I ++ + ++ A + P TA AS + L S W AVA G ++QG E +E ++ RA+ ++ C D + P + RA+L +A +HA D F+ Y Sbjct: 12 ATGLLGLQENTYLQMYCSCYAGIAWFTYEEIQRAVADVM-AFQDPLGTAKASAHDGGGEHALAKAADRSLLWVAVACGMMMQGVTDLERLEPFLTRARECIKECYDDASPQVLRAYLFLANVHATLEDYGRFQRY 145 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1020.285.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 8
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig1020.285.1 >prot_F-serratus_M_contig1020.285.1 ID=prot_F-serratus_M_contig1020.285.1|Name=mRNA_F-serratus_M_contig1020.285.1|organism=Fucus serratus male|type=polypeptide|length=478bp MDFIPLARQSTVREGMVRILTACRTPTAIASRTGETARNILQPDPSLSSFback to top mRNA from alignment at F-serratus_M_contig1020:172246..182757- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig1020.285.1 ID=mRNA_F-serratus_M_contig1020.285.1|Name=mRNA_F-serratus_M_contig1020.285.1|organism=Fucus serratus male|type=mRNA|length=10512bp|location=Sequence derived from alignment at F-serratus_M_contig1020:172246..182757- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig1020:172246..182757- >mRNA_F-serratus_M_contig1020.285.1 ID=mRNA_F-serratus_M_contig1020.285.1|Name=mRNA_F-serratus_M_contig1020.285.1|organism=Fucus serratus male|type=CDS|length=2868bp|location=Sequence derived from alignment at F-serratus_M_contig1020:172246..182757- (Fucus serratus male)back to top |