prot_F-serratus_M_contig1395.2844.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_F-serratus_M_contig1395.2844.1
Unique Name	prot_F-serratus_M_contig1395.2844.1
Type	polypeptide
Organism	Fucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length	97

Homology

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BLAST of mRNA_F-serratus_M_contig1395.2844.1 vs. uniprot
Match: D7G033_ECTSI (Ribosomal protein L35 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G033_ECTSI)

HSP 1 Score: 183 bits (465), Expect = 9.110e-58
Identity = 86/91 (94.51%), Postives = 90/91 (98.90%), Query Frame = 0

Query:    1 MLGFKRGLRNTYHHTSLIKIQGVEDKEASDFYLGKRVAYIYKAKVLKNGSKYRVVWGKVCRGHGTNGVVRAKFRTNLPPKAIGSPVRVMLY 91
            MLGFKRGLRNTYHHTSLIKIQGVEDKEAS+FYLGKR+AYIYKAK LKNG+KYRVVWGKVCRGHGTNGVVRAKFRTNLPPKAIG+PVRVMLY
Sbjct:   62 MLGFKRGLRNTYHHTSLIKIQGVEDKEASNFYLGKRIAYIYKAKTLKNGTKYRVVWGKVCRGHGTNGVVRAKFRTNLPPKAIGAPVRVMLY 152

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BLAST of mRNA_F-serratus_M_contig1395.2844.1 vs. uniprot
Match: A0A836CIX4_9STRA (Ribosomal protein L35Ae-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CIX4_9STRA)

HSP 1 Score: 163 bits (413), Expect = 2.430e-50
Identity = 74/91 (81.32%), Postives = 85/91 (93.41%), Query Frame = 0

Query:    1 MLGFKRGLRNTYHHTSLIKIQGVEDKEASDFYLGKRVAYIYKAKVLKNGSKYRVVWGKVCRGHGTNGVVRAKFRTNLPPKAIGSPVRVMLY 91
            +LG+KRGLRN Y+HTSLIKIQGVED  A++FYLGKR+AYIYKAK LKN SK+RV+WG+VCR HGTNGV+RAKFRTNLPPKAIG+PVRVMLY
Sbjct:   26 VLGYKRGLRNQYNHTSLIKIQGVEDTAATEFYLGKRIAYIYKAKALKNNSKFRVIWGRVCRAHGTNGVIRAKFRTNLPPKAIGAPVRVMLY 116

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BLAST of mRNA_F-serratus_M_contig1395.2844.1 vs. uniprot
Match: A0A7S2SN13_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SN13_9STRA)

HSP 1 Score: 152 bits (384), Expect = 6.190e-46
Identity = 73/91 (80.22%), Postives = 78/91 (85.71%), Query Frame = 0

Query:    1 MLGFKRGLRNTYHHTSLIKIQGVEDKEASDFYLGKRVAYIYKAKVLKNGSKYRVVWGKVCRGHGTNGVVRAKFRTNLPPKAIGSPVRVMLY 91
            +LG+KRGLRN Y HTSLIKIQGV+D +  DFYLGKRVAYIYKA    NGSKYRV+WGKVCR HGT GVVR KFRTNLPPKAIG PVRVMLY
Sbjct:   25 VLGYKRGLRNQYCHTSLIKIQGVDDCKDVDFYLGKRVAYIYKASNKVNGSKYRVIWGKVCRAHGTTGVVRCKFRTNLPPKAIGGPVRVMLY 115

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BLAST of mRNA_F-serratus_M_contig1395.2844.1 vs. uniprot
Match: A0A4D9CXD4_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CXD4_9STRA)

HSP 1 Score: 148 bits (374), Expect = 1.670e-44
Identity = 69/94 (73.40%), Postives = 80/94 (85.11%), Query Frame = 0

Query:    1 MLGFKRGLRNTYHHTSLIKIQGVEDKEASDFYLGKRVAYIYKAKVLKNGSKYRVVWGKVCRGHGTNGVVRAKFRTNLPPKAIGSPVRVMLYRPT 94
            +LG+KRGLR   +HTSLIKI G+++K++ DFYLGKR+AYIYKAK LKN +KYR +WGKV R HGTNGVVRAKFR NLPPKAIG PVRVMLY  T
Sbjct:   18 VLGYKRGLRQQTNHTSLIKIDGLDEKKSVDFYLGKRIAYIYKAKTLKNNTKYRAIWGKVTRAHGTNGVVRAKFRRNLPPKAIGGPVRVMLYPST 111

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BLAST of mRNA_F-serratus_M_contig1395.2844.1 vs. uniprot
Match: A0A7S1XMC8_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XMC8_9STRA)

HSP 1 Score: 145 bits (365), Expect = 5.170e-43
Identity = 69/92 (75.00%), Postives = 79/92 (85.87%), Query Frame = 0

Query:    1 MLGFKRGLRNTYHHTSLIKIQGVEDKEASDFYLGKRVAYIYKAKVL-KNGSKYRVVWGKVCRGHGTNGVVRAKFRTNLPPKAIGSPVRVMLY 91
            +LG+KRGLRN  +HTSLIKIQGVEDK+ + FYLGKR+AYIYKA    K GSK+RV+WGKVCR HG+NGVVRAKFR NLPP  IG+PVRVMLY
Sbjct:   26 VLGYKRGLRNQINHTSLIKIQGVEDKKETTFYLGKRIAYIYKAHTPNKEGSKFRVIWGKVCRAHGSNGVVRAKFRKNLPPSCIGAPVRVMLY 117

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BLAST of mRNA_F-serratus_M_contig1395.2844.1 vs. uniprot
Match: A0A812S7Z5_SYMMI (RPL35AC protein (Fragment) n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812S7Z5_SYMMI)

HSP 1 Score: 143 bits (361), Expect = 1.250e-42
Identity = 67/91 (73.63%), Postives = 77/91 (84.62%), Query Frame = 0

Query:    1 MLGFKRGLRNTYHHTSLIKIQGVEDKEASDFYLGKRVAYIYKAKVLKNGSKYRVVWGKVCRGHGTNGVVRAKFRTNLPPKAIGSPVRVMLY 91
            +LGFKRG RNTYHHT+L+KI+G  DK A D+YLGK+VAYIY+A+  K GSK+RVVWGKV R HG+NGVVRAKF TNL P  IGSPVRVMLY
Sbjct:   10 ILGFKRGRRNTYHHTNLLKIEGCNDKAAVDYYLGKKVAYIYRAQAAKAGSKFRVVWGKVTRPHGSNGVVRAKFTTNLSPTTIGSPVRVMLY 100

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BLAST of mRNA_F-serratus_M_contig1395.2844.1 vs. uniprot
Match: A0A7S1TVH1_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TVH1_9STRA)

HSP 1 Score: 145 bits (365), Expect = 2.100e-42
Identity = 69/92 (75.00%), Postives = 79/92 (85.87%), Query Frame = 0

Query:    1 MLGFKRGLRNTYHHTSLIKIQGVEDKEASDFYLGKRVAYIYKAKVL-KNGSKYRVVWGKVCRGHGTNGVVRAKFRTNLPPKAIGSPVRVMLY 91
            +LG+KRGLRN  +HTSLIKIQGVEDK+ + FYLGKR+AYIYKA    K GSK+RV+WGKVCR HG+NGVVRAKFR NLPP  IG+PVRVMLY
Sbjct:   72 VLGYKRGLRNQINHTSLIKIQGVEDKKETTFYLGKRIAYIYKAHTPNKEGSKFRVIWGKVCRAHGSNGVVRAKFRKNLPPSCIGAPVRVMLY 163

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BLAST of mRNA_F-serratus_M_contig1395.2844.1 vs. uniprot
Match: A0A7S2XUS1_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XUS1_9STRA)

HSP 1 Score: 142 bits (359), Expect = 3.870e-42
Identity = 66/91 (72.53%), Postives = 78/91 (85.71%), Query Frame = 0

Query:    1 MLGFKRGLRNTYHHTSLIKIQGVEDKEASDFYLGKRVAYIYKAKVLKNGSKYRVVWGKVCRGHGTNGVVRAKFRTNLPPKAIGSPVRVMLY 91
            M+G+K GLR  + HT+L KIQGV+DK+++ FYLGK++AYIYKA  LK  SKYRVVWGKV R HG+NGVVRAKFRTNLPPKAIG P+RVMLY
Sbjct:   24 MVGYKGGLRTQHCHTALAKIQGVDDKKSAGFYLGKKIAYIYKAHTLKKNSKYRVVWGKVTRAHGSNGVVRAKFRTNLPPKAIGGPLRVMLY 114

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BLAST of mRNA_F-serratus_M_contig1395.2844.1 vs. uniprot
Match: A0A7R9U9P7_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U9P7_9STRA)

HSP 1 Score: 141 bits (355), Expect = 1.350e-41
Identity = 65/92 (70.65%), Postives = 79/92 (85.87%), Query Frame = 0

Query:    1 MLGFKRGLRNTYHHTSLIKIQGVEDKEASDFYLGKRVAYIYKAKVL-KNGSKYRVVWGKVCRGHGTNGVVRAKFRTNLPPKAIGSPVRVMLY 91
            +LG+KRG RN Y+HTSL+KIQGV++K+ + FYLGKR+AYIYKA    K GSK+RV+WGKVCR HG+NGVVR KFR NLPP +IG+PVRVMLY
Sbjct:   18 VLGYKRGQRNQYNHTSLVKIQGVDEKKETTFYLGKRIAYIYKAHTPNKEGSKFRVIWGKVCRAHGSNGVVRCKFRKNLPPTSIGAPVRVMLY 109

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BLAST of mRNA_F-serratus_M_contig1395.2844.1 vs. uniprot
Match: F0Y7P3_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y7P3_AURAN)

HSP 1 Score: 139 bits (349), Expect = 1.010e-40
Identity = 63/91 (69.23%), Postives = 78/91 (85.71%), Query Frame = 0

Query:    1 MLGFKRGLRNTYHHTSLIKIQGVEDKEASDFYLGKRVAYIYKAKVLKNGSKYRVVWGKVCRGHGTNGVVRAKFRTNLPPKAIGSPVRVMLY 91
            +LG+KRGLRN Y  TSLIK++GV+D+ A+ FYLGKR+AYIYKA   K G+K+RV+WG+V R HG++GVVRAKFR NLPP+AIG PVRVMLY
Sbjct:   16 VLGYKRGLRNQYVSTSLIKVEGVQDQNAAQFYLGKRIAYIYKAHTEKKGTKFRVIWGRVMRAHGSSGVVRAKFRRNLPPQAIGGPVRVMLY 106

The following BLAST results are available for this feature:

BLAST of mRNA_F-serratus_M_contig1395.2844.1 vs. uniprot

BLAST of mRNA_F-serratus_M_contig1395.2844.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7G033_ECTSI	9.110e-58	94.51	Ribosomal protein L35 n=1 Tax=Ectocarpus siliculos...	[more]
A0A836CIX4_9STRA	2.430e-50	81.32	Ribosomal protein L35Ae-domain-containing protein ...	[more]
A0A7S2SN13_9STRA	6.190e-46	80.22	Hypothetical protein n=1 Tax=Rhizochromulina marin...	[more]
A0A4D9CXD4_9STRA	1.670e-44	73.40	Uncharacterized protein n=1 Tax=Nannochloropsis sa...	[more]
A0A7S1XMC8_9STRA	5.170e-43	75.00	Hypothetical protein n=1 Tax=Phaeomonas parva TaxI...	[more]
A0A812S7Z5_SYMMI	1.250e-42	73.63	RPL35AC protein (Fragment) n=1 Tax=Symbiodinium mi...	[more]
A0A7S1TVH1_9STRA	2.100e-42	75.00	Hypothetical protein n=1 Tax=Phaeomonas parva TaxI...	[more]
A0A7S2XUS1_9STRA	3.870e-42	72.53	Hypothetical protein n=1 Tax=Fibrocapsa japonica T...	[more]
A0A7R9U9P7_9STRA	1.350e-41	70.65	Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi...	[more]
F0Y7P3_AURAN	1.010e-40	69.23	Uncharacterized protein n=1 Tax=Aureococcus anopha...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR038661	Ribosomal protein L35A superfamily	GENE3D	2.40.10.190		coord: 1..95 e-value: 1.5E-41 score: 142.5
IPR001780	Ribosomal protein L35A	PFAM	PF01247	Ribosomal_L35Ae	coord: 1..89 e-value: 3.2E-39 score: 133.0
IPR001780	Ribosomal protein L35A	PANTHER	PTHR10902	60S RIBOSOMAL PROTEIN L35A	coord: 1..92
IPR001780	Ribosomal protein L35A	HAMAP	MF_00573	Ribosomal_L35Ae	coord: 1..89 score: 20.585
None	No IPR available	PANTHER	PTHR10902:SF0	RIBOSOMAL PROTEIN L35A	coord: 1..92
None	No IPR available	PRODOM	PD012670		coord: 1..88 e-value: 7.0E-26 score: 285.0
IPR018266	Ribosomal protein L35Ae, conserved site	PROSITE	PS01105	RIBOSOMAL_L35AE	coord: 57..78
IPR009000	Translation protein, beta-barrel domain superfamily	SUPERFAMILY	50447	Translation proteins	coord: 2..89

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
F-serratus_M_contig1395	contig	F-serratus_M_contig1395:86609..89092 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Fucus serratus MALE	2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90	2022-09-16
OGS1.0 of Fucus serratus male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_F-serratus_M_contig1395.2844.1	mRNA_F-serratus_M_contig1395.2844.1	Fucus serratus male	mRNA	F-serratus_M_contig1395 86609..89122 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_F-serratus_M_contig1395.2844.1 ID=prot_F-serratus_M_contig1395.2844.1|Name=mRNA_F-serratus_M_contig1395.2844.1|organism=Fucus serratus male|type=polypeptide|length=97bp
MLGFKRGLRNTYHHTSLIKIQGVEDKEASDFYLGKRVAYIYKAKVLKNGS
KYRVVWGKVCRGHGTNGVVRAKFRTNLPPKAIGSPVRVMLYRPTSN*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR038661	L35A_sf
IPR001780	Ribosomal_L35A
IPR018266	Ribosomal_L35Ae_CS
IPR009000	Transl_B-barrel_sf