mRNA_F-serratus_M_contig1395.2844.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig1395.2844.1 vs. uniprot
Match: D7G033_ECTSI (Ribosomal protein L35 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G033_ECTSI) HSP 1 Score: 198 bits (504), Expect = 1.580e-63 Identity = 94/101 (93.07%), Postives = 98/101 (97.03%), Query Frame = 1
Query: 1 QTTRLYVKGVMLGFKRGLRNTYHHTSLIKIQGVEDKEASDFYLGKRVAYIYKAKVLKNGSKYRVVWGKVCRGHGTNGVVRAKFRTNLPPKAIGSPVRVMLY 303
Q RLYVKGVMLGFKRGLRNTYHHTSLIKIQGVEDKEAS+FYLGKR+AYIYKAK LKNG+KYRVVWGKVCRGHGTNGVVRAKFRTNLPPKAIG+PVRVMLY
Sbjct: 52 QPVRLYVKGVMLGFKRGLRNTYHHTSLIKIQGVEDKEASNFYLGKRIAYIYKAKTLKNGTKYRVVWGKVCRGHGTNGVVRAKFRTNLPPKAIGAPVRVMLY 152
BLAST of mRNA_F-serratus_M_contig1395.2844.1 vs. uniprot
Match: A0A836CIX4_9STRA (Ribosomal protein L35Ae-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CIX4_9STRA) HSP 1 Score: 178 bits (452), Expect = 4.160e-56 Identity = 82/101 (81.19%), Postives = 93/101 (92.08%), Query Frame = 1
Query: 1 QTTRLYVKGVMLGFKRGLRNTYHHTSLIKIQGVEDKEASDFYLGKRVAYIYKAKVLKNGSKYRVVWGKVCRGHGTNGVVRAKFRTNLPPKAIGSPVRVMLY 303
Q RLYVKGV+LG+KRGLRN Y+HTSLIKIQGVED A++FYLGKR+AYIYKAK LKN SK+RV+WG+VCR HGTNGV+RAKFRTNLPPKAIG+PVRVMLY
Sbjct: 16 QPVRLYVKGVVLGYKRGLRNQYNHTSLIKIQGVEDTAATEFYLGKRIAYIYKAKALKNNSKFRVIWGRVCRAHGTNGVIRAKFRTNLPPKAIGAPVRVMLY 116
BLAST of mRNA_F-serratus_M_contig1395.2844.1 vs. uniprot
Match: A0A7S2SN13_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SN13_9STRA) HSP 1 Score: 167 bits (423), Expect = 1.060e-51 Identity = 81/101 (80.20%), Postives = 86/101 (85.15%), Query Frame = 1
Query: 1 QTTRLYVKGVMLGFKRGLRNTYHHTSLIKIQGVEDKEASDFYLGKRVAYIYKAKVLKNGSKYRVVWGKVCRGHGTNGVVRAKFRTNLPPKAIGSPVRVMLY 303
Q RLYVKGV+LG+KRGLRN Y HTSLIKIQGV+D + DFYLGKRVAYIYKA NGSKYRV+WGKVCR HGT GVVR KFRTNLPPKAIG PVRVMLY
Sbjct: 15 QPVRLYVKGVVLGYKRGLRNQYCHTSLIKIQGVDDCKDVDFYLGKRVAYIYKASNKVNGSKYRVIWGKVCRAHGTTGVVRCKFRTNLPPKAIGGPVRVMLY 115
BLAST of mRNA_F-serratus_M_contig1395.2844.1 vs. uniprot
Match: A0A4D9CXD4_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CXD4_9STRA) HSP 1 Score: 162 bits (410), Expect = 8.150e-50 Identity = 76/104 (73.08%), Postives = 88/104 (84.62%), Query Frame = 1
Query: 1 QTTRLYVKGVMLGFKRGLRNTYHHTSLIKIQGVEDKEASDFYLGKRVAYIYKAKVLKNGSKYRVVWGKVCRGHGTNGVVRAKFRTNLPPKAIGSPVRVMLYRPT 312
+ RLYVKGV+LG+KRGLR +HTSLIKI G+++K++ DFYLGKR+AYIYKAK LKN +KYR +WGKV R HGTNGVVRAKFR NLPPKAIG PVRVMLY T
Sbjct: 8 EPVRLYVKGVVLGYKRGLRQQTNHTSLIKIDGLDEKKSVDFYLGKRIAYIYKAKTLKNNTKYRAIWGKVTRAHGTNGVVRAKFRRNLPPKAIGGPVRVMLYPST 111
BLAST of mRNA_F-serratus_M_contig1395.2844.1 vs. uniprot
Match: A0A7S1XMC8_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XMC8_9STRA) HSP 1 Score: 158 bits (400), Expect = 3.610e-48 Identity = 76/102 (74.51%), Postives = 86/102 (84.31%), Query Frame = 1
Query: 1 QTTRLYVKGVMLGFKRGLRNTYHHTSLIKIQGVEDKEASDFYLGKRVAYIYKAKVL-KNGSKYRVVWGKVCRGHGTNGVVRAKFRTNLPPKAIGSPVRVMLY 303
Q RLY KGV+LG+KRGLRN +HTSLIKIQGVEDK+ + FYLGKR+AYIYKA K GSK+RV+WGKVCR HG+NGVVRAKFR NLPP IG+PVRVMLY
Sbjct: 16 QPVRLYTKGVVLGYKRGLRNQINHTSLIKIQGVEDKKETTFYLGKRIAYIYKAHTPNKEGSKFRVIWGKVCRAHGSNGVVRAKFRKNLPPSCIGAPVRVMLY 117
BLAST of mRNA_F-serratus_M_contig1395.2844.1 vs. uniprot
Match: A0A7S1TVH1_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TVH1_9STRA) HSP 1 Score: 158 bits (400), Expect = 1.510e-47 Identity = 76/102 (74.51%), Postives = 86/102 (84.31%), Query Frame = 1
Query: 1 QTTRLYVKGVMLGFKRGLRNTYHHTSLIKIQGVEDKEASDFYLGKRVAYIYKAKVL-KNGSKYRVVWGKVCRGHGTNGVVRAKFRTNLPPKAIGSPVRVMLY 303
Q RLY KGV+LG+KRGLRN +HTSLIKIQGVEDK+ + FYLGKR+AYIYKA K GSK+RV+WGKVCR HG+NGVVRAKFR NLPP IG+PVRVMLY
Sbjct: 62 QPVRLYTKGVVLGYKRGLRNQINHTSLIKIQGVEDKKETTFYLGKRIAYIYKAHTPNKEGSKFRVIWGKVCRAHGSNGVVRAKFRKNLPPSCIGAPVRVMLY 163
BLAST of mRNA_F-serratus_M_contig1395.2844.1 vs. uniprot
Match: A0A7R9U9P7_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U9P7_9STRA) HSP 1 Score: 156 bits (394), Expect = 2.310e-47 Identity = 73/102 (71.57%), Postives = 87/102 (85.29%), Query Frame = 1
Query: 1 QTTRLYVKGVMLGFKRGLRNTYHHTSLIKIQGVEDKEASDFYLGKRVAYIYKAKVL-KNGSKYRVVWGKVCRGHGTNGVVRAKFRTNLPPKAIGSPVRVMLY 303
Q RLYVKGV+LG+KRG RN Y+HTSL+KIQGV++K+ + FYLGKR+AYIYKA K GSK+RV+WGKVCR HG+NGVVR KFR NLPP +IG+PVRVMLY
Sbjct: 8 QPVRLYVKGVVLGYKRGQRNQYNHTSLVKIQGVDEKKETTFYLGKRIAYIYKAHTPNKEGSKFRVIWGKVCRAHGSNGVVRCKFRKNLPPTSIGAPVRVMLY 109
BLAST of mRNA_F-serratus_M_contig1395.2844.1 vs. uniprot
Match: A0A812S7Z5_SYMMI (RPL35AC protein (Fragment) n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812S7Z5_SYMMI) HSP 1 Score: 155 bits (392), Expect = 3.520e-47 Identity = 73/99 (73.74%), Postives = 84/99 (84.85%), Query Frame = 1
Query: 7 TRLYVKGVMLGFKRGLRNTYHHTSLIKIQGVEDKEASDFYLGKRVAYIYKAKVLKNGSKYRVVWGKVCRGHGTNGVVRAKFRTNLPPKAIGSPVRVMLY 303
TRL+VKG +LGFKRG RNTYHHT+L+KI+G DK A D+YLGK+VAYIY+A+ K GSK+RVVWGKV R HG+NGVVRAKF TNL P IGSPVRVMLY
Sbjct: 2 TRLHVKGTILGFKRGRRNTYHHTNLLKIEGCNDKAAVDYYLGKKVAYIYRAQAAKAGSKFRVVWGKVTRPHGSNGVVRAKFTTNLSPTTIGSPVRVMLY 100
BLAST of mRNA_F-serratus_M_contig1395.2844.1 vs. uniprot
Match: H3G9D5_PHYRM (Uncharacterized protein n=12 Tax=Peronosporaceae TaxID=4777 RepID=H3G9D5_PHYRM) HSP 1 Score: 155 bits (392), Expect = 4.380e-47 Identity = 73/101 (72.28%), Postives = 85/101 (84.16%), Query Frame = 1
Query: 1 QTTRLYVKGVMLGFKRGLRNTYHHTSLIKIQGVEDKEASDFYLGKRVAYIYKAKVLKNGSKYRVVWGKVCRGHGTNGVVRAKFRTNLPPKAIGSPVRVMLY 303
Q TRLYVKGV LG+KRGLRN Y HT+L+K+QG+ DK+ DFYLGK++AYIYKAK LKNGS++RVVWGKV R HG+NGVVRAKF NLP +AI VRVMLY
Sbjct: 7 QPTRLYVKGVFLGYKRGLRNQYSHTALVKVQGLTDKKDVDFYLGKKIAYIYKAKSLKNGSQFRVVWGKVMRAHGSNGVVRAKFAKNLPAEAISKSVRVMLY 107
BLAST of mRNA_F-serratus_M_contig1395.2844.1 vs. uniprot
Match: A0A7S2XUS1_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XUS1_9STRA) HSP 1 Score: 155 bits (392), Expect = 5.440e-47 Identity = 73/101 (72.28%), Postives = 85/101 (84.16%), Query Frame = 1
Query: 1 QTTRLYVKGVMLGFKRGLRNTYHHTSLIKIQGVEDKEASDFYLGKRVAYIYKAKVLKNGSKYRVVWGKVCRGHGTNGVVRAKFRTNLPPKAIGSPVRVMLY 303
Q RLYVK VM+G+K GLR + HT+L KIQGV+DK+++ FYLGK++AYIYKA LK SKYRVVWGKV R HG+NGVVRAKFRTNLPPKAIG P+RVMLY
Sbjct: 14 QPVRLYVKAVMVGYKGGLRTQHCHTALAKIQGVDDKKSAGFYLGKKIAYIYKAHTLKKNSKYRVVWGKVTRAHGSNGVVRAKFRTNLPPKAIGGPLRVMLY 114 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1395.2844.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig1395.2844.1 >prot_F-serratus_M_contig1395.2844.1 ID=prot_F-serratus_M_contig1395.2844.1|Name=mRNA_F-serratus_M_contig1395.2844.1|organism=Fucus serratus male|type=polypeptide|length=97bp MLGFKRGLRNTYHHTSLIKIQGVEDKEASDFYLGKRVAYIYKAKVLKNGSback to top mRNA from alignment at F-serratus_M_contig1395:86609..89122- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig1395.2844.1 ID=mRNA_F-serratus_M_contig1395.2844.1|Name=mRNA_F-serratus_M_contig1395.2844.1|organism=Fucus serratus male|type=mRNA|length=2514bp|location=Sequence derived from alignment at F-serratus_M_contig1395:86609..89122- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig1395:86609..89122- >mRNA_F-serratus_M_contig1395.2844.1 ID=mRNA_F-serratus_M_contig1395.2844.1|Name=mRNA_F-serratus_M_contig1395.2844.1|organism=Fucus serratus male|type=CDS|length=582bp|location=Sequence derived from alignment at F-serratus_M_contig1395:86609..89122- (Fucus serratus male)back to top |