mRNA_F-serratus_M_contig1391.2830.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig1391.2830.1 vs. uniprot
Match: A0A6H5K8T1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8T1_9PHAE) HSP 1 Score: 125 bits (313), Expect = 2.550e-31 Identity = 59/91 (64.84%), Postives = 77/91 (84.62%), Query Frame = 3
Query: 3 KIEFYDCAGQVDYAGMHQTFLTRRALYLLVWDVKLFCGLDDRSLEKAVYTNIMRWLYTLHLRAPGSTVILVANKCDTTPLSNFEDTTKKLK 275
K+EF+DCAGQVDYAGMHQTFLTRRALYLLV D+ + G+DD L+KA++ +IMRWLY L+LRAPGSTV+LVANKCD + + F +T ++++
Sbjct: 121 KVEFFDCAGQVDYAGMHQTFLTRRALYLLVVDITKYHGVDD--LDKAIHDDIMRWLYYLYLRAPGSTVVLVANKCDGS-IDKFAETAERIQ 208
BLAST of mRNA_F-serratus_M_contig1391.2830.1 vs. uniprot
Match: A0A6H5JW02_9PHAE (Roc domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JW02_9PHAE) HSP 1 Score: 123 bits (309), Expect = 9.010e-31 Identity = 56/75 (74.67%), Postives = 62/75 (82.67%), Query Frame = 3
Query: 6 IEFYDCAGQVDYAGMHQTFLTRRALYLLVWDVKLFCGLDDRSLEKAVYTNIMRWLYTLHLRAPGSTVILVANKCD 230
+EFYDCAGQVDY GMHQ FLTRRALYLLVWDV G D L++ ++ +IMRWLY LHLRAPGSTVILVANKCD
Sbjct: 275 VEFYDCAGQVDYYGMHQNFLTRRALYLLVWDVLRCHGKTDDDLDEVIFQDIMRWLYVLHLRAPGSTVILVANKCD 349
BLAST of mRNA_F-serratus_M_contig1391.2830.1 vs. uniprot
Match: D7FVX5_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVX5_ECTSI) HSP 1 Score: 120 bits (301), Expect = 1.090e-29 Identity = 54/75 (72.00%), Postives = 60/75 (80.00%), Query Frame = 3
Query: 6 IEFYDCAGQVDYAGMHQTFLTRRALYLLVWDVKLFCGLDDRSLEKAVYTNIMRWLYTLHLRAPGSTVILVANKCD 230
+EFYDCAGQVDY GMHQTFLTRRALYLLVWDV G + L+K V +IM+WLY LHLR PGS V+LVANKCD
Sbjct: 437 VEFYDCAGQVDYYGMHQTFLTRRALYLLVWDVSRCHGKESNDLDKVVSEDIMKWLYALHLRVPGSAVLLVANKCD 511
BLAST of mRNA_F-serratus_M_contig1391.2830.1 vs. uniprot
Match: A0A267E8A3_9PLAT (Uncharacterized protein n=1 Tax=Macrostomum lignano TaxID=282301 RepID=A0A267E8A3_9PLAT) HSP 1 Score: 60.5 bits (145), Expect = 1.350e-8 Identity = 29/72 (40.28%), Postives = 44/72 (61.11%), Query Frame = 3
Query: 15 YDCAGQVDYAGMHQTFLTRRALYLLVWDVKLFCGLDDRSLEKAVYTNIMRWLYTLHLRAPGSTVILVANKCD 230
+D GQ +Y HQ FL++RA+YL+VWD++ DR +E ++ +WL +H RAP S+VI+V D
Sbjct: 74 WDFGGQKEYYATHQYFLSKRAIYLVVWDLRT----GDRGME-----SVHQWLVNIHSRAPRSSVIIVGTHLD 136
BLAST of mRNA_F-serratus_M_contig1391.2830.1 vs. uniprot
Match: A0A1I8JJ84_9PLAT (Non-specific serine/threonine protein kinase n=1 Tax=Macrostomum lignano TaxID=282301 RepID=A0A1I8JJ84_9PLAT) HSP 1 Score: 60.5 bits (145), Expect = 1.360e-8 Identity = 29/72 (40.28%), Postives = 44/72 (61.11%), Query Frame = 3
Query: 15 YDCAGQVDYAGMHQTFLTRRALYLLVWDVKLFCGLDDRSLEKAVYTNIMRWLYTLHLRAPGSTVILVANKCD 230
+D GQ +Y HQ FL++RA+YL+VWD++ DR +E ++ +WL +H RAP S+VI+V D
Sbjct: 1086 WDFGGQKEYYATHQYFLSKRAIYLVVWDLRT----GDRGME-----SVHQWLVNIHSRAPRSSVIIVGTHLD 1148
BLAST of mRNA_F-serratus_M_contig1391.2830.1 vs. uniprot
Match: A0A267FM03_9PLAT (Non-specific serine/threonine protein kinase (Fragment) n=3 Tax=Macrostomum lignano TaxID=282301 RepID=A0A267FM03_9PLAT) HSP 1 Score: 60.5 bits (145), Expect = 1.360e-8 Identity = 29/72 (40.28%), Postives = 44/72 (61.11%), Query Frame = 3
Query: 15 YDCAGQVDYAGMHQTFLTRRALYLLVWDVKLFCGLDDRSLEKAVYTNIMRWLYTLHLRAPGSTVILVANKCD 230
+D GQ +Y HQ FL++RA+YL+VWD++ DR +E ++ +WL +H RAP S+VI+V D
Sbjct: 1159 WDFGGQKEYYATHQYFLSKRAIYLVVWDLRT----GDRGME-----SVHQWLVNIHSRAPRSSVIIVGTHLD 1221
BLAST of mRNA_F-serratus_M_contig1391.2830.1 vs. uniprot
Match: A0A2R5GNV1_9STRA (Leucine-rich repeat serine/threonine-protein kinase 2 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GNV1_9STRA) HSP 1 Score: 59.7 bits (143), Expect = 2.530e-8 Identity = 27/75 (36.00%), Postives = 43/75 (57.33%), Query Frame = 3
Query: 6 IEFYDCAGQVDYAGMHQTFLTRRALYLLVWDVKLFCGLDDRSLEKAVYTNIMRWLYTLHLRAPGSTVILVANKCD 230
++ +D AGQ Y HQ FL+RR LYLLVWDV + + + + W+Y++ R PG+ ++++A K D
Sbjct: 907 LDMWDFAGQSVYYRTHQIFLSRRTLYLLVWDV-------SKHQQAQIDMEVCFWVYSVQARIPGAVILIIAAKTD 974
BLAST of mRNA_F-serratus_M_contig1391.2830.1 vs. uniprot
Match: L1I8G5_GUITC (Uncharacterized protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1I8G5_GUITC) HSP 1 Score: 59.3 bits (142), Expect = 3.420e-8 Identity = 34/86 (39.53%), Postives = 46/86 (53.49%), Query Frame = 3
Query: 18 DCAGQVDYAGMHQTFLTRRALYLLVWDVKLFCGLDDRSLEKAVYTNIMRWLYTLHLRAPGSTVILVANKCDTTPLSNFEDTTKKLK 275
D GQ YA +Q F+ RRALYLLVW+V+ G D+ + + I WL R PGS+V+LVA D S D +++K
Sbjct: 275 DFGGQQIYAKTNQYFIVRRALYLLVWNVR---GKRDKQSMEELKMMIATWLRATQARVPGSSVLLVATHIDLVGESEVTDQCEEVK 357
BLAST of mRNA_F-serratus_M_contig1391.2830.1 vs. uniprot
Match: U2NM77_9CLOT (Roc domain-containing protein n=2 Tax=Clostridium intestinale TaxID=36845 RepID=U2NM77_9CLOT) HSP 1 Score: 58.5 bits (140), Expect = 6.300e-8 Identity = 32/77 (41.56%), Postives = 42/77 (54.55%), Query Frame = 3
Query: 3 KIEFYDCAGQVDYAGMHQTFLTRRALYLLVWDVKLFCGLDDRSLEKAVYTNIMRWLYTLHLRAPGSTVILVANKCDT 233
++ +D GQ Y HQ FLT+R+LYLL+WD + +D Y I WL T+ A S +ILV NKCDT
Sbjct: 307 RLNVWDFGGQEIYHATHQFFLTKRSLYLLIWDGQA----EDE------YGRIEYWLKTIESFANDSPIILVVNKCDT 373
BLAST of mRNA_F-serratus_M_contig1391.2830.1 vs. uniprot
Match: A0A7M6DPN8_9CNID (Non-specific serine/threonine protein kinase n=1 Tax=Clytia hemisphaerica TaxID=252671 RepID=A0A7M6DPN8_9CNID) HSP 1 Score: 58.5 bits (140), Expect = 6.460e-8 Identity = 30/75 (40.00%), Postives = 40/75 (53.33%), Query Frame = 3
Query: 15 YDCAGQVDYAGMHQTFLTRRALYLLVWDVKLFCGLDDRSLEKAVYTNIMRWLYTLHLRAPGSTVILVANKCDTTP 239
+D AGQ DY HQ FL+RR+LYLL+W D + L V + WL L R PG+T+I++ D P
Sbjct: 556 WDFAGQDDYYATHQCFLSRRSLYLLIW--------DSQELSNGV-NGLKLWLDNLTTRVPGATIIVIGTMLDKVP 621 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1391.2830.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig1391.2830.1 >prot_F-serratus_M_contig1391.2830.1 ID=prot_F-serratus_M_contig1391.2830.1|Name=mRNA_F-serratus_M_contig1391.2830.1|organism=Fucus serratus male|type=polypeptide|length=79bp MHQTFLTRRALYLLVWDVKLFCGLDDRSLEKAVYTNIMRWLYTLHLRAPGback to top mRNA from alignment at F-serratus_M_contig1391:144112..144601+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig1391.2830.1 ID=mRNA_F-serratus_M_contig1391.2830.1|Name=mRNA_F-serratus_M_contig1391.2830.1|organism=Fucus serratus male|type=mRNA|length=490bp|location=Sequence derived from alignment at F-serratus_M_contig1391:144112..144601+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig1391:144112..144601+ >mRNA_F-serratus_M_contig1391.2830.1 ID=mRNA_F-serratus_M_contig1391.2830.1|Name=mRNA_F-serratus_M_contig1391.2830.1|organism=Fucus serratus male|type=CDS|length=474bp|location=Sequence derived from alignment at F-serratus_M_contig1391:144112..144601+ (Fucus serratus male)back to top |