mRNA_F-serratus_M_contig139.2805.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig139.2805.1 vs. uniprot
Match: D7FNQ1_ECTSI (Chain A, Crystal Structure Of A Designed Full Consensus Ankyrin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNQ1_ECTSI) HSP 1 Score: 236 bits (601), Expect = 1.100e-71 Identity = 135/220 (61.36%), Postives = 146/220 (66.36%), Query Frame = 3
Query: 3 DAPLLGAAAETWTPLMLACAEGDVRAVRAIIEIGGARASARVGTKVLPSFAPLHVASRYGHASVAAALLELGAVVDAQDTIGMTXXXXXXXXXXXXXXXXXXXXXXDASA--EGPGGALAWDAAMMAGFDDACALLKKHSSRGD--APIAERRKALGAWLESLGCGEILGRLLRAGYDDLYFMAEHGLTEEDLDCVGVPKEKLGLRKKLLVMHGVEGFLD 650
DAPLL + AETWTPL LACAEG V VRAI+EIGGAR S TKVL S +PLHVASRYGHA VAA LLELGAVVDA+DT G T DAS+ E P A A D A MAGFDDA LL+ + G+ RRK L +WL LGC E LGR LRAGYDDL FMA GLTE DLDCVGVP +KLGLRKKLL MHGVEGFL+
Sbjct: 30 DAPLLRSVAETWTPLALACAEGRVELVRAIVEIGGARPSFSAQTKVLASSSPLHVASRYGHAGVAAVLLELGAVVDARDTFGFTPLCYAAGNGHLKTIEVLLEAGADASSSFEAPYAAKALDMAEMAGFDDAATLLRSRALAGEDGGEAVRRRKTLASWLGVLGCREFLGRFLRAGYDDLQFMASQGLTEADLDCVGVPGDKLGLRKKLLAMHGVEGFLN 249
BLAST of mRNA_F-serratus_M_contig139.2805.1 vs. uniprot
Match: A0A835YT05_9STRA (A designed full consensus ankyrin n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YT05_9STRA) HSP 1 Score: 127 bits (318), Expect = 8.500e-30 Identity = 88/207 (42.51%), Postives = 108/207 (52.17%), Query Frame = 3
Query: 24 AAETWTPLMLACAEGDVRAVRAIIEIGGARASARVGTKVLPSFAPLHVASRYGHAS--VAAALLELGAVVDAQDTIGMTXXXXXXXXXXXXXXXXXXXXXXDASAEGPGGALA-WDAAMMAGFDDACALLKKHSSRGDAPIAERRKALGAWLESLGCGEILGRLLRAGYDDLYFMAEHGLTEEDLDCVGVPKEKLGLRKKLLVMHGV 635
A E WTPL LA AEG+ AV +++ GAR + +KVLP PLHVA+RYG + VAA L GA A D+ GMT A A GAL DAA + ALL+ ++R A R L AWL SLGCG AGYDDL F+A HGL+ EDLDC+GVP +LGLR+KL +H +
Sbjct: 53 AGEQWTPLHLAVAEGNHAAVAFLLQ-HGARPDSIATSKVLPGHTPLHVAARYGSSPDIVAALLAAPGADAGAADSHGMTPLHYAACSGHADCAQQLLSAGASALAPSAHGALTPLDAARLCRHAAVAALLEAAAAREGA-----RAPLAAWLRSLGCGAYARAFAAAGYDDLAFIAAHGLSAEDLDCIGVPMAQLGLRRKLTALHNI 253
BLAST of mRNA_F-serratus_M_contig139.2805.1 vs. uniprot
Match: A0A7S2FWK0_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FWK0_9STRA) HSP 1 Score: 98.2 bits (243), Expect = 9.600e-20 Identity = 91/202 (45.05%), Postives = 114/202 (56.44%), Query Frame = 3
Query: 30 ETWTPLMLACAEGDVRAVRAIIEIGGARAS--ARVGTKVLPSFAPLHVASRYGHASVAAALLELGAVVDAQDTIGMTXXXXXXXXXXXXXXXXXXXXXXDASAEGPGGALAWDAAMMAGFDDACALLKKHSSRGDAPIAERRKALGAWLESLGCGEILGRLLRAGYDDLYFMAEHGLTEEDLDCVGVPKEKLGLRKKLLVMH 629
E W PL L AEG+ V A++ GAR A+ +P LH+A+RYGHA V +AL+ GA V+ +D G XXXXXXXXXXXXXXXXXXXX + ALL+ +R +P A L +WLESLGC + R L AGYD Y ++EHGL E+D+D V VP+ KLGLRKKLL +
Sbjct: 37 EDWNPLQLLAAEGNKAGVEAVLT-AGARVDFHAQPAAPGVPWQTALHIAARYGHAEVVSALVSAGADVNLRDGSGFAPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHRELAALLR---TRKASPEASDHDKLASWLESLGCAKYTTRFLDAGYDFQY-ISEHGLAEDDIDLVQVPRTKLGLRKKLLALQ 233
BLAST of mRNA_F-serratus_M_contig139.2805.1 vs. uniprot
Match: A0A6G0W6S4_9STRA (SAM domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0W6S4_9STRA) HSP 1 Score: 84.7 bits (208), Expect = 3.910e-15 Identity = 80/207 (38.65%), Postives = 113/207 (54.59%), Query Frame = 3
Query: 36 WTPLMLACAEGDVRAVRAIIEIGGARASARVGTKVLPSFAPLHVASRYGHASVAAALLELGAVVDAQDTIGMTXXXXXXXXXXXXXXXXXXXXXXDASAEGPGGALAWDAAMMAGFDDACALLKKHSSRGDAPIAERRKA--LGAWLESLGCGEILGRLLRAGYDDLYFMAEHGLTEEDLDCVGVPKEKLGLRKKLLVMHGVEGFLD 650
WTPL ACA G++ +I+ G VG + + LH+A+++G + LL GA VD+ D I XXXXXXXXXXXXXXXXXXX A G L + A + G D ALL ++ P + +A L AWL ++G E + + AG+DDL F++EHGLT DL +GV K G + KL ++ ++ F++
Sbjct: 28 WTPLQYACAVGNITLATTLIQQGSNNVVHHVG-QTKGGYTALHIAAKFGSTQLVQLLLTNGASVDSVDAIHXXXXXXXXXXXXXXXXXXXXXNAHAAQIPSKAGTLPIECARVGGHSDIVALLAPYT----VPSTTKAEATPLHAWLSAIGLNEYTDKFVAAGFDDLAFISEHGLTMNDLIAIGVTKR--GHQVKLKRLYRIDEFVE 227
BLAST of mRNA_F-serratus_M_contig139.2805.1 vs. uniprot
Match: A0A812P6A8_SYMMI (ANK3 protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812P6A8_SYMMI) HSP 1 Score: 82.4 bits (202), Expect = 8.400e-15 Identity = 51/164 (31.10%), Postives = 76/164 (46.34%), Query Frame = 3
Query: 156 PLHVASRYGHASVAAALLELGAVVDAQDTIGMTXXXXXXXXXXXXXXXXXXXXXXDASAEGPGGALAWDAAMMAGFDDACALLKKHSSRGDAPIAERRKALGAWLESLGCGEILGRLLRAGYDDLYFMAEHGLTEEDLDCVGVPKEKLGLRKKLLVMHGVEGFL 647
P+H+ + YGH + +L D QD G T +AS G+ A G+ + +L S + P A + + WL SLG G + +AGYD L F+A HGL++ED DCVG+P ++GLR+KL +H +E F+
Sbjct: 3 PVHICALYGHVDILV-ILVTATNADIQDQWGFTALHYAVSNRKIQAVQFLLDFGANASLTSSAGSTPLQIAQELGYHEIADILASKVSITEDPAAPQFRE---WLRSLGAGAYISSFFKAGYD-LAFVAAHGLSDEDCDCVGIPTSQMGLRRKLKTLHKIELFV 161
BLAST of mRNA_F-serratus_M_contig139.2805.1 vs. uniprot
Match: W4GKR9_9STRA (SAM domain-containing protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GKR9_9STRA) HSP 1 Score: 82.4 bits (202), Expect = 2.430e-14 Identity = 88/221 (39.82%), Postives = 120/221 (54.30%), Query Frame = 3
Query: 3 DAPLLGAAAET----WTPLMLACAEGDVRAVRAIIEIGGARASARVGTKVLPSFAPLHVASRYGHASVAAALLELGAVVDAQDTIGMTXXXXXXXXXXXXXXXXXXXXXXDASAEGPGGALAWDAAMMAGFDDACALLKKHSSRGDAPIAERRKALGAWLESLGCGEILGRLLRAGYDDLYFMAEHGLTEEDLDCVGVPKEKLGLRKKLLVMHGVEGFLDK 653
D LL A + T WTPL ACA GD+ ++E +VG + + LHVA + GH + LL GAVVDA DT G TXXXXXXXXXXXXXXXXXX G L + A GFD+ ALL S+ +P ++ + WL S+G G+ ++AG+DD+ F+ E+GLT ED+ +GV K G + KL ++ ++ F+ K
Sbjct: 12 DDDLLDAGSPTGTLRWTPLQYACAAGDIAVATTLLENDNNLVH-QVG-QTQGKYTALHVAVQSGHKDIVQLLLAHGAVVDAADTRGFTXXXXXXXXXXXXXXXXXXQANATQQPS-KAGTLPIECAHATGFDEITALLGP-STPSTSPPSD--SGVRDWLASIGLGQYAHAFVQAGFDDVNFLHENGLTTEDVVALGVVKR--GHQLKLKRLYQIDRFIHK 224
BLAST of mRNA_F-serratus_M_contig139.2805.1 vs. uniprot
Match: A0A8K1FNW7_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FNW7_PYTOL) HSP 1 Score: 72.4 bits (176), Expect = 9.390e-11 Identity = 58/206 (28.16%), Postives = 94/206 (45.63%), Query Frame = 3
Query: 36 WTPLMLACAEGDVRAVRAIIEIGGARASARVGTKVLPSFAPLHVASRYGHASVAAALLELGAVVD--AQDTIGMTXXXXXXXXXXXXXXXXXXXXXXDASAEGPGGALAWDAAMMAGFDDACALLKKHSSRGDAPIAERRKALGAWLESLGCGEILGRLLRAGYDDLYFMAEHGLTEEDLDCVGVPKEKLGLRKKLLVMHGVEGFL 647
WTPL ACA GD I+ + + TK S++ LHVA+R+G AS+ +LL+ GA+ A +G + G ++ A G + +L+ H R A+ ++ LG WL S+G E + AG++D++F+ +GLT+ LD + + EK G R KL ++ ++ FL
Sbjct: 28 WTPLQFACALGDEELAEQILAQDEHQLHSVSKTKY--SYSALHVATRFGQASIVDSLLKKGAMTTTPADGVVGASPLHIAVVQGNMPLVQRLLSAYPHGMPMTKNGTTPYELAKRLGHVEISQVLQDHEQR-----AQNKEQLGNWLASIGMVEYAPQFEEAGFEDVHFLLANGLTDSVLDRMKI--EKPGHRMKLQSLYQLKEFL 224
BLAST of mRNA_F-serratus_M_contig139.2805.1 vs. uniprot
Match: A0A2D4C8T6_PYTIN (SAM domain-containing protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C8T6_PYTIN) HSP 1 Score: 67.0 bits (162), Expect = 6.760e-9 Identity = 65/231 (28.14%), Postives = 95/231 (41.13%), Query Frame = 3
Query: 3 DAPLL--------GAAAETWTPLMLACAEGDVRAVRAIIEIGGARASARVGTKVLPSFAPLHVASRYGHASVAAALLELGA--------VVDAQDTIGMTXXXXXXXXXXXXXXXXXXXXXXDASAEGPGGALAWDAAMMAGFDDACALLKKHSSRGDAPIAERRKALGAWLESLGCGEILGRLLRAGYDDLYFMAEHGLTEEDLDCVGVPKEKLGLRKKLLVMHGVEGFL 647
DAPLL GA A WTPL ACA GD V ++ + + +APLHVA+R+GH+ + LL A V DA + + D G ++ A G + LL+ H R ++ G WL S+G E + AG+DD +F+ HGL++ LD + + EK G R KL ++ ++ FL
Sbjct: 3 DAPLLLLDAGSPRGAVA--WTPLQYACAVGDDARVAELLAAADDASVLFDCGRTRFGYAPLHVATRFGHSQIVERLLAKAAECRVLHQPVDDAFMSAFASQYALLHGDEVGASALHIAVVQGDVELNGT---TPYELAQRLGLSEISQLLRDHEKR-----TRSKELXGDWLASIGLIEYAPQFHAAGFDDAHFLLLHGLSDATLDAMKI--EKPGHRSKLQRLYQLKEFL 221
BLAST of mRNA_F-serratus_M_contig139.2805.1 vs. uniprot
Match: A0A482UJW8_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482UJW8_9ARCH) HSP 1 Score: 62.4 bits (150), Expect = 1.020e-8 Identity = 30/57 (52.63%), Postives = 41/57 (71.93%), Query Frame = 3
Query: 474 SLGCGEILGRLLRAGYDDLYFMAEHGLTEEDLDCVGVPKEKLGLRKKLLVMHGVEGF 644
+LG E L R L AGYD L F+ HGL++ DLDC+GVP K+GLR+K+ +HG++ F
Sbjct: 9 TLGGSEYLQRFLDAGYD-LPFIHTHGLSDVDLDCIGVPVNKMGLRRKMSKLHGLDRF 64
BLAST of mRNA_F-serratus_M_contig139.2805.1 vs. uniprot
Match: A0A1W0A539_9STRA (SAM domain-containing protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A539_9STRA) HSP 1 Score: 62.4 bits (150), Expect = 1.710e-7 Identity = 57/188 (30.32%), Postives = 80/188 (42.55%), Query Frame = 3
Query: 36 WTPLMLACAEGDVRAVRAIIEIGGARASARVGTKVLPSFAPLHVASRYGHASVAAALLELGAVVDAQDTIGMTXXXXXXXXXXXXXXXXXXXXXXDASAE---GPGGALAWDAAMMAGFDDACALLKKHSSRGDAPIAERRKALGAWLESLGCGEILGRLLRAGYDDLYFMAEHGLTEEDLDCVGVPK 590
WT LM ACA+GDV V + + + TK ++ LHVA ++ LL GAV+DA D +G T A+A+ G + A+ AG L+ H P+ E + WL+ LG E + AGYDDL F+ + GL+ EDL +GV K
Sbjct: 19 WTSLMYACAKGDVALVDDCLNANNSLHDKGI-TKF--NYTALHVAVKFDQKDFVKKLLAQGAVIDAIDEMGFTSLHFAAALGLTNMVELLL----QANAKQLPSKTGIFPHECALEAGHIAIAERLQPHIE----PVKEN--LVHKWLKMLGFNEYIALFDGAGYDDLEFIRQEGLSREDLKAIGVEK 193 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig139.2805.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 14
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig139.2805.1 >prot_F-serratus_M_contig139.2805.1 ID=prot_F-serratus_M_contig139.2805.1|Name=mRNA_F-serratus_M_contig139.2805.1|organism=Fucus serratus male|type=polypeptide|length=271bp MLACAEGDVRAVRAIIEIGGARASARVGTKVLPSFAPLHVASRYGHASVAback to top mRNA from alignment at F-serratus_M_contig139:340793..342400- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig139.2805.1 ID=mRNA_F-serratus_M_contig139.2805.1|Name=mRNA_F-serratus_M_contig139.2805.1|organism=Fucus serratus male|type=mRNA|length=1608bp|location=Sequence derived from alignment at F-serratus_M_contig139:340793..342400- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig139:340793..342400- >mRNA_F-serratus_M_contig139.2805.1 ID=mRNA_F-serratus_M_contig139.2805.1|Name=mRNA_F-serratus_M_contig139.2805.1|organism=Fucus serratus male|type=CDS|length=1626bp|location=Sequence derived from alignment at F-serratus_M_contig139:340793..342400- (Fucus serratus male)back to top |