prot_F-serratus_M_contig139.2803.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig139.2803.1
Unique Nameprot_F-serratus_M_contig139.2803.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length952
Homology
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BLAST of mRNA_F-serratus_M_contig139.2803.1 vs. uniprot
Match: D7FNK0_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FNK0_ECTSI)

HSP 1 Score: 655 bits (1689), Expect = 1.300e-215
Identity = 566/1027 (55.11%), Postives = 651/1027 (63.39%), Query Frame = 0 
Query:    1 MYLRKYREGKARRGEVPSVQIYNAALRALDECQKWKLALSVFREMQSDGVAADRNSYFFVVSACSRRGAVKTALELVAEMRATWA------------------------QGGPAPDLLLYAXXXXXXXXXXXXXXXXXXXXXXXATGVRPNVVVVNTVLSACAKCGQVERAKELLRDMKEKHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVLGLLRRKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLFEELTRSSDASLAXXXXXXXXXXXXXXXXXXXXXXXXXXXEAKDRGLRPDVITYRRAATLIRACERASPPQPEVALRLVADMETAGVRPNNTTFVSVALSLGRAGKPLECLGVLDEMRERGTPPDAICRQTVLRVLDRWDRAEEAIELFEEMKN--QGLARLPDIAEEMYCCGIRALEKLGRWSTAVELLEEWRSLDSYNSGKEAMYDQWYRALSLLA-GGLAESTDAKTARAAIVSAAGGGLAEQALAIMQEMDSMGFDLGVVEYGAVMEALERSGKPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLPASRTIQSVAGMCRNAGKYEPLWDLKELMRDMMKDGT-LAKPGSSIYASLIRACGAAGRPDLVLRCLAEMNIDQSPGRDWRIPALDEPFTVSAAVGALSECNETAEADRLYVDAIRRGIFPDPAEGKTWTAAVSRARSATTAI-----------PRSSSFPAS---RVEVVRGSLPVKTISRDNMGKHLVSEGL---DGGDAGGSVE-----------STRVGAGGDGRGGLS--------------------------LWVDLRKVPFAVMPSAVRRVVQAMKNVGGFIDGLVVQWGEARRVGEREGEGEGTESGGG------RSRNGGGNVGHTGRRMSVLAAFGCIEPPLKLTELPNKRGQMHVEREEVQRWLREIRT 939
            MYLRKYRE K  +GE+P + +YN ALRALD C+KW+LALSVFREMQSDGV  DR+SYFFV+SACS+RG  KTAL L+AEM+A                            G PAPDLLLYA                       A GV PNVVVVNT LSACAKCGQV RA +LL++M+EK+XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVLG+LRRK  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX F+EL  S D SL XXXXXXXXXXX                EAK + LR          TLIRACER+ P QP+VAL+LV+DME  GVRPNNTT+V VA+SLGR+ +PLECL +L  M  +GTPPDAIC   VL+VLDRWD AEEA  LFEEM    + +A +P IAEE YCCGIRALE+LG+WS AV LL++WR   SY++  + MYDQWYRAL LL+ GGL E TD KT+RAAIVSAA GGL E ALAIM+ M+S GF+LGVVEYGA +EA E++GKP                                                  LP  +T ++VAG+CRN+G+YE LWDLKELMRD++ DG  LA+PGSSIY SLIRACGAA RPDLVLRCLAEMN DQ+PG+     AL+EP+ VSAA+GALS C ET+EADR+Y DAIRR I PDPA G+TW AA                      P     P +    + +  G    +  +R   G     +G    DG   GGS +           S      GDG   L                           LWVDLRK P AV+PSAVRRVV+A++ VGG  DGLVVQW  AR   E                   R+    G   + GRR +VL AF  +EP L +TE  N RGQ+ VER E+QRWL+E+ T
Sbjct:  148 MYLRKYREAKVLKGELPRIALYNTALRALDRCKKWRLALSVFREMQSDGVDPDRDSYFFVMSACSKRGEAKTALALLAEMKARXXXXXXXXXXXXXXXXPGGYGEVEDEDGAPAPDLLLYAVVMKACAWGKRWQQAIRLLDDMSAAGVAPNVVVVNTALSACAKCGQVSRATQLLQEMQEKYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVLGMLRRKGLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFDELVASGDESLRXXXXXXXXXXXVFSDAGMLPRALELLEEAKAKRLRXXXXXX---XTLIRACERSMPSQPDVALKLVSDMEAEGVRPNNTTYVGVAISLGRSARPLECLDLLRSMHGKGTPPDAICYLAVLKVLDRWDLAEEASLLFEEMVETIEQIALMPAIAEETYCCGIRALERLGKWSEAVALLDQWRQKGSYDADNDRMYDQWYRALRLLSTGGLPEETDVKTSRAAIVSAARGGLVEDALAIMRSMESRGFELGVVEYGAAIEAFEKAGKPERGLEMFDEMIAAGVEPDVLCYAAATRCCCRRLDWAGAISFVETTLREGLLPTGKTFETVAGLCRNSGRYEELWDLKELMRDIVVDGGGLARPGSSIYVSLIRACGAARRPDLVLRCLAEMNTDQAPGKSPGTLALEEPYMVSAAIGALSACGETSEADRIYADAIRRRILPDPAAGQTWAAAXXXXXXXXXXXXXXXXXXXXXXPGRRRVPGAVGAAIGLGGGEEVTEAATRQQRGVRRRQDGTGYRDGHGRGGSDDDDSGDGRDVPVSPASRRNGDGSSSLGERDRGTPETETTAAEAGVVWGTVAPPLWVDLRKAPVAVIPSAVRRVVKAVEAVGGVTDGLVVQWAGARGASEXXXXXXXXXXXXXXXXXXXRATKTRGKPANAGRRGAVLEAFASVEPALGVTEPSNSRGQVRVERRELQRWLQEVGT 1171
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig139.2803.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FNK0_ECTSI1.300e-21555.11Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 643..763
e-value: 5.6E-7
score: 31.2
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 177..281
e-value: 6.7E-34
score: 118.8
coord: 282..391
e-value: 2.2E-22
score: 81.3
coord: 85..176
e-value: 4.1E-25
score: 90.2
coord: 511..640
e-value: 2.6E-20
score: 74.5
coord: 3..84
e-value: 3.5E-13
score: 51.3
coord: 392..498
e-value: 6.2E-12
score: 47.2
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 432..449
e-value: 0.14
score: 12.4
coord: 32..50
e-value: 1.4
score: 9.3
coord: 664..688
e-value: 0.28
score: 11.5
coord: 201..231
e-value: 0.0043
score: 17.2
coord: 595..617
e-value: 0.52
score: 10.7
IPR002885Pentatricopeptide repeatPFAMPF13812PPR_3coord: 330..386
e-value: 2.7E-4
score: 20.9
coord: 539..592
e-value: 1.3E-5
score: 25.2
coord: 115..172
e-value: 5.0E-11
score: 42.5
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 555..587
e-value: 2.5E-5
score: 22.2
coord: 236..269
e-value: 3.6E-8
score: 31.1
coord: 130..164
e-value: 4.8E-7
score: 27.5
coord: 165..199
e-value: 4.5E-6
score: 24.5
coord: 272..298
e-value: 7.7E-5
score: 20.6
coord: 392..418
e-value: 6.5E-4
score: 17.7
coord: 201..235
e-value: 1.4E-4
score: 19.8
coord: 309..343
e-value: 2.1E-4
score: 19.2
coord: 96..128
e-value: 0.0014
score: 16.7
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 233..282
e-value: 5.1E-11
score: 42.6
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 345..381
score: 6.599
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 705..739
score: 7.706
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 382..416
score: 9.668
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 18..52
score: 9.514
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 661..691
score: 6.917
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 417..451
score: 8.364
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 199..233
score: 10.446
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 456..486
score: 6.04
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 307..341
score: 10.633
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 92..126
score: 9.821
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 163..193
score: 10.315
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 516..550
score: 6.686
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 234..268
score: 12.759
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 586..620
score: 9.81
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 551..585
score: 10.885
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 53..83
score: 7.498
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 127..157
score: 10.238
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 269..299
score: 10.38
NoneNo IPR availablePANTHERPTHR46128FAMILY NOT NAMEDcoord: 361..482
coord: 131..347
coord: 460..740
coord: 8..156

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig139contigF-serratus_M_contig139:307431..315803 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig139.2803.1mRNA_F-serratus_M_contig139.2803.1Fucus serratus malemRNAF-serratus_M_contig139 306853..329929 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig139.2803.1 ID=prot_F-serratus_M_contig139.2803.1|Name=mRNA_F-serratus_M_contig139.2803.1|organism=Fucus serratus male|type=polypeptide|length=952bp
MYLRKYREGKARRGEVPSVQIYNAALRALDECQKWKLALSVFREMQSDGV
AADRNSYFFVVSACSRRGAVKTALELVAEMRATWAQGGPAPDLLLYAVAV
KACAVGKSWREALNLLDEMSATGVRPNVVVVNTVLSACAKCGQVERAKEL
LRDMKEKHGVTPDVVSYNSVISGHERAGEWREALALARQMERSEGILPTV
VTFNSAIGACKRAGRSMEALAVLGLLRRKGLRPDVISFNSAMSACASGGK
WEEALELLDLMPSEGVKPDLTTYNTALNACVKSGQWEIALSLFEELTRSS
DASLAPDLYSYNTFMGFFSDSGMLLRALDLLEEAKDRGLRPDVITYRRAA
TLIRACERASPPQPEVALRLVADMETAGVRPNNTTFVSVALSLGRAGKPL
ECLGVLDEMRERGTPPDAICRQTVLRVLDRWDRAEEAIELFEEMKNQGLA
RLPDIAEEMYCCGIRALEKLGRWSTAVELLEEWRSLDSYNSGKEAMYDQW
YRALSLLAGGLAESTDAKTARAAIVSAAGGGLAEQALAIMQEMDSMGFDL
GVVEYGAVMEALERSGKPERSLEIFDEMVACGVEPDVLCFAAATRCCCKR
GDWESAISVLEATLRKGLLPASRTIQSVAGMCRNAGKYEPLWDLKELMRD
MMKDGTLAKPGSSIYASLIRACGAAGRPDLVLRCLAEMNIDQSPGRDWRI
PALDEPFTVSAAVGALSECNETAEADRLYVDAIRRGIFPDPAEGKTWTAA
VSRARSATTAIPRSSSFPASRVEVVRGSLPVKTISRDNMGKHLVSEGLDG
GDAGGSVESTRVGAGGDGRGGLSLWVDLRKVPFAVMPSAVRRVVQAMKNV
GGFIDGLVVQWGEARRVGEREGEGEGTESGGGRSRNGGGNVGHTGRRMSV
LAAFGCIEPPLKLTELPNKRGQMHVEREEVQRWLREIRTLEGVQPRRKNR
Y*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf
IPR002885Pentatricopeptide_repeat