mRNA_F-serratus_M_contig139.2803.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig139.2803.1 vs. uniprot
Match: D7FNK0_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FNK0_ECTSI) HSP 1 Score: 702 bits (1811), Expect = 1.210e-229 Identity = 589/1075 (54.79%), Postives = 685/1075 (63.72%), Query Frame = 3
Query: 222 KSREQTGETAAEGNNLSAKPSWVEDPDEDRVKIWIRTAGRKGEHDRVAMYLRKYREGKARRGEVPSVQIYNAALRALDECQKWKLALSVFREMQSDGVAADRNSYFFVVSACSRRGAVKTALELVAEMRATWA------------------------QGGPAPDLLLYAXXXXXXXXXXXXXXXXXXXXXXXATGVRPNVVVVNTVLSACAKCGQVERAKELLRDMKEKHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVLGLLRRKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLFEELTRSSDASLAXXXXXXXXXXXXXXXXXXXXXXXXXXXEAKDRGLRPDVITYRRAATLIRACERASPPQPEVALRLVADMETAGVRPNNTTFVSVALSLGRAGKPLECLGVLDEMRERGTPPDAICRQTVLRVLDRWDRAEEAIELFEEMKN--QGLARLPDIAEEMYCCGIRALEKLGRWSTAVELLEEWRSLDSYNSGKEAMYDQWYRALSLLA-GGLAESTDAKTARAAIVSAAGGGLAEQALAIMQEMDSMGFDLGVVEYGAVMEALERSGKPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLPASRTIQSVAGMCRNAGKYEPLWDLKELMRDMMKDGT-LAKPGSSIYASLIRACGAAGRPDLVLRCLAEMNIDQSPGRDWRIPALDEPFTVSAAVGALSECNETAEADRLYVDAIRRGIFPDPAEGKTWTAAVSRARSATTAI-----------PRSSSFPAS---RVEVVRGSLPVKTISRDNMGKHLVSEGL---DGGDAGGSVE-----------STRVGAGGDGRGGLS--------------------------LWVDLRKVPFAVMPSAVRRVVQAMKNVGGFIDGLVVQWGEARRVGEREGEGEGTESGGG------RSRNGGGNVGHTGRRMSVLAAFGCIEPPLKLTELPNKRGQMHVEREEVQRWLREIRT 3182
K++++ G AE +PSWV+DP E RVK+W+R+A KG+H+RVAMYLRKYRE K +GE+P + +YN ALRALD C+KW+LALSVFREMQSDGV DR+SYFFV+SACS+RG KTAL L+AEM+A G PAPDLLLYA A GV PNVVVVNT LSACAKCGQV RA +LL++M+EK+XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVLG+LRRK XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX F+EL S D SL XXXXXXXXXXX EAK + LR TLIRACER+ P QP+VAL+LV+DME GVRPNNTT+V VA+SLGR+ +PLECL +L M +GTPPDAIC VL+VLDRWD AEEA LFEEM + +A +P IAEE YCCGIRALE+LG+WS AV LL++WR SY++ + MYDQWYRAL LL+ GGL E TD KT+RAAIVSAA GGL E ALAIM+ M+S GF+LGVVEYGA +EA E++GKP LP +T ++VAG+CRN+G+YE LWDLKELMRD++ DG LA+PGSSIY SLIRACGAA RPDLVLRCLAEMN DQ+PG+ AL+EP+ VSAA+GALS C ET+EADR+Y DAIRR I PDPA G+TW AA P P + + + G + +R G +G DG GGS + S GDG L LWVDLRK P AV+PSAVRRVV+A++ VGG DGLVVQW AR E R+ G + GRR +VL AF +EP L +TE N RGQ+ VER E+QRWL+E+ T
Sbjct: 100 KAQDEAGSKDAERKAAGPEPSWVQDPGESRVKMWMRSAASKGDHNRVAMYLRKYREAKVLKGELPRIALYNTALRALDRCKKWRLALSVFREMQSDGVDPDRDSYFFVMSACSKRGEAKTALALLAEMKARXXXXXXXXXXXXXXXXPGGYGEVEDEDGAPAPDLLLYAVVMKACAWGKRWQQAIRLLDDMSAAGVAPNVVVVNTALSACAKCGQVSRATQLLQEMQEKYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVLGMLRRKGLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFDELVASGDESLRXXXXXXXXXXXVFSDAGMLPRALELLEEAKAKRLRXXXXXX---XTLIRACERSMPSQPDVALKLVSDMEAEGVRPNNTTYVGVAISLGRSARPLECLDLLRSMHGKGTPPDAICYLAVLKVLDRWDLAEEASLLFEEMVETIEQIALMPAIAEETYCCGIRALERLGKWSEAVALLDQWRQKGSYDADNDRMYDQWYRALRLLSTGGLPEETDVKTSRAAIVSAARGGLVEDALAIMRSMESRGFELGVVEYGAAIEAFEKAGKPERGLEMFDEMIAAGVEPDVLCYAAATRCCCRRLDWAGAISFVETTLREGLLPTGKTFETVAGLCRNSGRYEELWDLKELMRDIVVDGGGLARPGSSIYVSLIRACGAARRPDLVLRCLAEMNTDQAPGKSPGTLALEEPYMVSAAIGALSACGETSEADRIYADAIRRRILPDPAAGQTWAAAXXXXXXXXXXXXXXXXXXXXXXPGRRRVPGAVGAAIGLGGGEEVTEAATRQQRGVRRRQDGTGYRDGHGRGGSDDDDSGDGRDVPVSPASRRNGDGSSSLGERDRGTPETETTAAEAGVVWGTVAPPLWVDLRKAPVAVIPSAVRRVVKAVEAVGGVTDGLVVQWAGARGASEXXXXXXXXXXXXXXXXXXXRATKTRGKPANAGRRGAVLEAFASVEPALGVTEPSNSRGQVRVERRELQRWLQEVGT 1171 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig139.2803.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 1
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig139.2803.1 >prot_F-serratus_M_contig139.2803.1 ID=prot_F-serratus_M_contig139.2803.1|Name=mRNA_F-serratus_M_contig139.2803.1|organism=Fucus serratus male|type=polypeptide|length=952bp MYLRKYREGKARRGEVPSVQIYNAALRALDECQKWKLALSVFREMQSDGVback to top mRNA from alignment at F-serratus_M_contig139:306853..329929- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig139.2803.1 ID=mRNA_F-serratus_M_contig139.2803.1|Name=mRNA_F-serratus_M_contig139.2803.1|organism=Fucus serratus male|type=mRNA|length=23077bp|location=Sequence derived from alignment at F-serratus_M_contig139:306853..329929- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig139:306853..329929- >mRNA_F-serratus_M_contig139.2803.1 ID=mRNA_F-serratus_M_contig139.2803.1|Name=mRNA_F-serratus_M_contig139.2803.1|organism=Fucus serratus male|type=CDS|length=5712bp|location=Sequence derived from alignment at F-serratus_M_contig139:306853..329929- (Fucus serratus male)back to top |