prot_F-serratus_M_contig139.2800.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig139.2800.1
Unique Nameprot_F-serratus_M_contig139.2800.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length329
Homology
BLAST of mRNA_F-serratus_M_contig139.2800.1 vs. uniprot
Match: A0A6H5L4T7_9PHAE (TFIIB-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L4T7_9PHAE)

HSP 1 Score: 294 bits (752), Expect = 1.140e-94
Identity = 152/276 (55.07%), Postives = 202/276 (73.19%), Query Frame = 0
Query:    1 MNAFREYSMRCSDCKDATDIYFDARSGDVICRECGVVMGERLIDDGQEWRTFSTDDHAGRADPSRCGDAVSPLLSAESNMNTFIEGGNNKKQTGRLQKAEGMAAKESTSEVALRA-CFARVREIAHNLGLPSSIQEDACLLLRKVEDKGLFKVKRDPRGKAMCAAVTYITCRTWSVSRSMKDVSKAVDIPLRDVNKACKHVFKNMDIDKG-AVRGTHLIPELCNKLEVPAFITMAAQNVAQKASKLDLVGGMMPSAVAAAAVLLVCSLWKPAACRD 274
            M+ +   +M C +C   +DIY D R+G++ICR C VV+GER IDDG EW+T++ D + GRADP+RCG A SPLLSA+S MNT IEGG + K T +LQK +GMA KES SE AL+   F +VRE  + LGL  ++QE ACLLLRK ED GLFKVK+  RG A+C AVT +TCR W   ++MK++S   ++ L+ +NKA K +  N++I++  ++RG H IP LC+KL +P F+++AA++ AQ+AS+ DLV GM PSAVAAAAVLLVCS W PAAC D
Sbjct:    1 MDRYMGSTMFCKECVAESDIYVDPRAGEIICRTCAVVIGERCIDDGAEWQTYAEDSNNGRADPNRCGAAASPLLSAKSGMNTLIEGGQDSKLTAKLQKLQGMAVKESASERALKMDFFGKVREFGNRLGLTHAMQEHACLLLRKAEDSGLFKVKKAERGVAICVAVTLLTCRQWRRGQTMKEMSTMFNVSLKALNKAVKKL-SNLEIERAPSLRGEHHIPLLCDKLGLPPFVSVAARHAAQQASRWDLVDGMKPSAVAAAAVLLVCSCWNPAACGD 275          
BLAST of mRNA_F-serratus_M_contig139.2800.1 vs. uniprot
Match: A0A835YX77_9STRA (TFIIB-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YX77_9STRA)

HSP 1 Score: 140 bits (352), Expect = 3.320e-35
Identity = 91/260 (35.00%), Postives = 145/260 (55.77%), Query Frame = 0
Query:   11 CSDCKDATDIYFDARSGDVICRECGVVMGERLIDDGQEWRTFSTDDHAGRADPSRCGDAVSPLLSAESNMNTFIEGGNNKKQTGRLQKAEGMAAKESTSEV--ALRACFARVREIAHNLGLPSSIQEDACLLLRKVEDKGLFKVKRDPRGKAMCAAVTYITCRTWSVSRSMKDVSKAVDIPLRDVNKACKHVFKNM---DIDKGA---VRGTHLIPELCNKLEVPAFITMAAQNVAQKASKLDLVGGMMPSAVAAAAVLL 262
            C +C+ + DI  D  +GD+ICR CG+V+ +R+I+D  EWRT++ DD   + DPSRC  A    L       T+++GGN K     L  A   A K + + +  A+ A    + +I   LG+   I++ A  LL++++  G F+ K    G AMCAAV YI  +     R+  +++ A ++  R+V KA KH  +++     D+ A   + G HL+P LC+ L VP  ++ AA+ +A + ++L L+ G+ P  VAAAA  L
Sbjct:   10 CPECR-SRDIVIDFGAGDIICRGCGLVVADRMIEDTAEWRTYADDDR-NKGDPSRCSGA----LEVGFGSTTYLKGGN-KSNASSLNAACITADKLAGAGITKAMLAALENLDDIGQRLGVSREIRQAAAHLLKQLDKGGRFRRKSGAGGSAMCAAVLYIALKRHRAGRTFGEMAPAANVDKREVAKAYKHASRHLPPPSNDEAADALILGEHLVPRLCDALGVPQ-VSQAAKEIATQCAELSLIDGIKPQVVAAAATWL 261          
BLAST of mRNA_F-serratus_M_contig139.2800.1 vs. uniprot
Match: H3HBD3_PHYRM (TFIIB-type domain-containing protein n=4 Tax=Peronosporaceae TaxID=4777 RepID=H3HBD3_PHYRM)

HSP 1 Score: 136 bits (342), Expect = 4.790e-34
Identity = 86/260 (33.08%), Postives = 136/260 (52.31%), Query Frame = 0
Query:   11 CSDCKDATDIYFDARSGDVICRECGVVMGERLIDDGQEWRTFSTDDHAGR-ADPSRCGDAVSPLLSAESNMNTFIE----GGNNKKQTGRLQKAEGMAAKESTSEVALRACFARVREIAHNLGLPSSIQEDACLLLRKVEDKGLFKVKRDPRGKAMCAAVTYITCRTWSVSRSMKDVSKAVDIPLRDVNKACKHVFKNMDIDKGAVRGTHLIPELCNKLEVPAFITMAAQNVAQKASKLDLVGGMMPSAVAAAAVLLVCS 265
            C +C  A D+  D  +GDV+CR CG+++GER+IDD  EWRTF+ DD  G  A  SR GD     L++ S     ++    GG     +GR  K   +++ +      ++   +R++E+A +L LP  I E A  +  + E +G+    R P   +M  AV +I CR    +RS+K+  +A  +P R + K+   + + +DID         +   C++L +P    M A  VA+KA  L+L  G  P AVAA+ + LV +
Sbjct:   10 CRECGSA-DVVTDFSAGDVVCRSCGMILGERIIDDSPEWRTFANDDRGGDPAAKSRVGDVADARLNSLSLTTYLVDPKKGGGGGDADSGRKHKRPNISS-DCAKVKRMQRNMSRIQEVADSLSLPKKIVEIALDVYAEAEKQGVNM--RGPERDSMAVAVLFIACRKAGNARSLKEFEEASGVPKRRIGKSFMSLQRRLDIDVKQATTDEYVQRFCSRLGLPNKTQMIAHAVAKKADSLELSNGQPPVAVAASVIYLVAA 265          
BLAST of mRNA_F-serratus_M_contig139.2800.1 vs. uniprot
Match: A0A024GL73_9STRA (TFIIB-type domain-containing protein n=2 Tax=Albugo TaxID=65356 RepID=A0A024GL73_9STRA)

HSP 1 Score: 132 bits (333), Expect = 8.760e-33
Identity = 90/268 (33.58%), Postives = 140/268 (52.24%), Query Frame = 0
Query:    7 YSMRCSDCKDATDIYFDARSGDVICRECGVVMGERLIDDGQEWRTFSTDDHAG-RADPSRCG--------DAVSPLLSAESNMNTFIEGGNNKKQTGRLQKAEGMAAKESTSEVALRACFARVREIAHNLGLPSSIQEDACLLLRKVEDKGLFKVKRDPRGKAMCAAVTYITCRTWSVSRSMKDVSKAVDIPLRDVNKACKHVFKNMDIDKGAVRGTHLIPELCNKLEVPAFITMAAQNVAQKASKLDLVGGMMPSAVAAAAVLLVCS 265
            Y+  C DC  + DI  D  +GDV+CR CG+V+GER++DD  EWRTFS DD  G  A  SR G        +A    +  +S ++      N   QT RL K      KES +    +    R+REI+  L LP  I E A  + ++ E KG+    R P  +++ AAV +I CR    +R++K++  A  +  + + K+   + K ++ D      T+ +   C++L +PA   + A +VA+KA  L L  G  P+A+AA+ + LV +
Sbjct:    4 YAQSCVDC-GSDDIVTDYGAGDVVCRNCGIVLGERIVDDTPEWRTFSNDDRGGDAASKSRVGQLEDQGIENATLTTILVDSTLDKI----NGNTQTTRLPKLN----KESANIRRKQNMTNRIREISETLSLPKIIVECAMQVYQEAERKGILI--RGPEKESVAAAVVFIACRQAGHARTLKELEGASGVMKKKIGKSFLILKKQLNFDFQQATTTNYVERFCSRLGLPAKTQVIAHDVAKKAQTLGLTDGKSPTALAASVIYLVAA 260          
BLAST of mRNA_F-serratus_M_contig139.2800.1 vs. uniprot
Match: A0A8J4ZHJ2_9CHEL (Transcription initiation factor IIB n=1 Tax=Nymphon striatum TaxID=424472 RepID=A0A8J4ZHJ2_9CHEL)

HSP 1 Score: 133 bits (334), Expect = 1.130e-32
Identity = 89/267 (33.33%), Postives = 142/267 (53.18%), Query Frame = 0
Query:    2 NAFREYSMRCSDCKDATDIYFDARSGDVICRECGVVMGERLIDDGQEWRTFSTDDHAGRADPSRCGDAVSPLLSAESNMNTFIEGGNNKKQTGRLQKAEGMAAKE------STSEVALRACFARVREIAHNLGLPSSIQEDACLLLRKVEDKGLFKVKRDPRGKAMCAAVTYITCRTWSVSRSMKDVSKAVDIPLRDVNKACKHVFKNMDIDKGAVRGTHLIPELCNKLEVPAFITMAAQNVAQKASKLDLVGGMMPSAVAAAAVLL 262
            N F    + C     A  I  D R+GD+IC+ECG+V+G+R++D G EWRTFS ++    +DPSR G A +PLL+  S+++T I  G     TG     E   AK       +TS+ AL + F  +  +   + LP +I + A  L ++V D    K  R     A+ +A  YI CR   V R+ K++     I  +++ +  K V K ++ +   +     +   C+ L++P+ +  AA ++AQKA +LD+V G  P +VAAAA+ +
Sbjct:   20 NQFNSSQLMCPQHPSAALIE-DYRAGDMICQECGLVVGDRVVDVGSEWRTFSNEN--ANSDPSRVGSAENPLLNG-SDLSTVIGRG-----TGNASFDENGVAKYQNRRSMNTSDRALISAFREISNMCDRINLPKTITDRANNLFKQVHDG---KTLRGRCNDAIASACLYIACRQEGVPRTFKEICAISRISKKEIGRCFKLVLKALETNVNLITSGDFMSRFCSNLQLPSSVQRAATHIAQKAVELDVVSGRSPISVAAAAIYM 274          
BLAST of mRNA_F-serratus_M_contig139.2800.1 vs. uniprot
Match: A0A8K1CU27_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CU27_PYTOL)

HSP 1 Score: 131 bits (330), Expect = 2.560e-32
Identity = 86/263 (32.70%), Postives = 141/263 (53.61%), Query Frame = 0
Query:    7 YSMRCSDCKDATDIYFDARSGDVICRECGVVMGERLIDDGQEWRTFSTDDHAGR-ADPSRCGDAVSPLLSAESNMNTFI---EGGNNKKQTGRLQKAEGMAAKESTSEVALRACFARVREIAHNLGLPSSIQEDACLLLRKVEDKGLFKVKRDPRGKAMCAAVTYITCRTWSVSRSMKDVSKAVDIPLRDVNKACKHVFKNMDIDKGAVRGTHLIPELCNKLEVPAFITMAAQNVAQKASKLDLVGGMMPSAVAAAAVLLVCS 265
            ++ RC  C  + D+  D  +GD++CRECG+++GER++DD  EWR F+ DD  G  A  SR G+A+   L + S + TF+   +  +   +  R  +  G+   ES     +    A+++E+A  L LP  I E A  +  + E KG+    R P  ++M  AV +I CR    +RS+K+ + A  IP   + K+   + KN++++         +   C++L +P    M A +VA+KA +L L  G  P+AVAA+ V LV +
Sbjct:    6 FTERCGAC-GSMDVVTDFGAGDIVCRECGLILGERIVDDSPEWRNFANDDRGGDPAAKSRVGEAMDHRLDSAS-LTTFLVDTKPSSKGAEGDRPHRRPGLKT-ESARVRRMEGMLAKIQEVADALALPKVIVEVAMDVYAEAEKKGVSM--RGPEKESMPVAVLFIACRKSGNARSLKEFAAASGIPKNRIGKSFMVLSKNLNLEMTQATTEEYVRRFCSRLGLPTKTQMIANDVAKKADELGLSTGKSPNAVAASVVYLVAA 263          
BLAST of mRNA_F-serratus_M_contig139.2800.1 vs. uniprot
Match: UPI0006451B5A (hypothetical protein n=1 Tax=Acytostelium subglobosum LB1 TaxID=1410327 RepID=UPI0006451B5A)

HSP 1 Score: 130 bits (328), Expect = 9.790e-32
Identity = 85/263 (32.32%), Postives = 148/263 (56.27%), Query Frame = 0
Query:    8 SMRCSDCKDAT-DIYFDARSGDVICRECGVVMGERLIDDGQEWRTFSTDDHAGRADPSRCGDAVSPLLSAESNMNTFIEGGNNKKQTGRLQKAEGMAAKESTSEVALRACFARVREIAHNLGLPSSIQEDACLLLRKVEDKGLFKVKRDPRGKAMCAAVTYITCRTWSVSRSMKDV-SKAVDIPLRDVNKACKHVFKNMD--IDKGAVRGTHLIPELCNKLEVPAFITMAAQNVAQKASKLDLVGGMMPSAVAAAAVLLVCSL 266
            ++ C  CK+   DI  D   GD+ICRECGVV+G+R++D+  EWRTFS  +  G +DP+R G   +PLLS +S ++T I  GN+K  +G L + +   A  S     L   F  +  +  ++GLP  + + A  L +++EDK   K +         AA  YI CR   ++R+ K++ + + ++  +D+N+  K + +++   ++  A+     +   C  L++P  I  AA++V++ A++L +V G  P +VAAA++ +V  L
Sbjct:   30 NVTCPVCKNPDPDIVEDYARGDLICRECGVVIGDRIVDEHSEWRTFSNSESTG-SDPNRVGGPTNPLLS-DSGLSTVIGKGNSK-DSGALSRMQNRGALASGDRTLLNG-FKEISRMGDHMGLPQMVMDTANELYKQMEDKKSLKGRS---ADGFLAASLYIACRLKGITRTFKEICALSNNVSKKDLNRCYKLMKESLSTKVNLQAISTEDFMTRFCVNLQLPKEIKQAAEHVSRTATELGIVAGKNPISVAAASIYMVSQL 285          
BLAST of mRNA_F-serratus_M_contig139.2800.1 vs. uniprot
Match: A0A8D3A2J0_SCOMX (Transcription initiation factor IIB n=4 Tax=Scophthalmus maximus TaxID=52904 RepID=A0A8D3A2J0_SCOMX)

HSP 1 Score: 129 bits (325), Expect = 1.760e-31
Identity = 90/256 (35.16%), Postives = 136/256 (53.12%), Query Frame = 0
Query:    9 MRCSDCKDATDIYFDARSGDVICRECGVVMGERLIDDGQEWRTFSTDDHAGRADPSRCGDAVSPLLSAESNMNTFIEGGNNKKQTGRLQKAEGMAAK-ESTSEVALRACFARVREIAHNLGLPSSIQEDACLLLRKV-EDKGLFKVKRDPRGKAMCAAVTYITCRTWSVSRSMKDVSKAVDIPLRDVNKACKHVFKNMDIDKGAVRGTHLIPELCNKLEVPAFITMAAQNVAQKASKLDLVGGMMPSAVAAAAVLL 262
            + C D  DA  +  D R+GD+IC ECG+V+G+R+ID G EWRTFS +      DPSR GDA +PLL+   ++ T I  G          K +    + +S+S+ A+   F  +R +A  + LP+ I +    L ++V E K L     D    A+  A  YI CR   V R+ K++     I  + + +  K + K +DI    +    L+P  C+ L +P  + MAA  +A+KA +LDLV G  P +VAAAA+ +
Sbjct:   15 VHCPDHPDAI-LVEDYRAGDMICPECGLVVGDRVIDVGSEWRTFSNE--KALKDPSRVGDAQNPLLNG-GDLTTMISKGTGAASFDECGKPKYQNRRTKSSSDRAMLNAFEEIRTMADRIHLPAIIIDRTNNLFKQVYEQKSLKGHAHD----AIATACLYIACRQEGVPRTFKEICAVSPISKKKIGRCFKLILKMLDISLDLINPGDLMPRFCSNLGLPKPVRMAANFIARKAVELDLVPGRSPISVAAAAIYM 262          
BLAST of mRNA_F-serratus_M_contig139.2800.1 vs. uniprot
Match: T1KYS9_TETUR (Transcription initiation factor IIB n=1 Tax=Tetranychus urticae TaxID=32264 RepID=T1KYS9_TETUR)

HSP 1 Score: 128 bits (321), Expect = 4.740e-31
Identity = 86/268 (32.09%), Postives = 145/268 (54.10%), Query Frame = 0
Query:    3 AFREYSMRCSDCKDATDIYFDARSGDVICRECGVVMGERLIDDGQEWRTFSTDDHAGRADPSRCGDAVSPLLSAESNMNTFI------EGGNNKKQTGRLQKAEGMAAKESTSEVALRACFARVREIAHNLGLPSSIQEDACLLLRKVEDKGLFKVKRDPRGKAMCAAVTYITCRTWSVSRSMKDVSKAVDIPLRDVNKACKHVFKNMDIDKGAVRGTHLIPELCNKLEVPAFITMAAQNVAQKASKLDLVGGMMPSAVAAAAVLLVC 264
            ++R+  + C +  DAT I  D R+GD+IC ECG+V+G+R+ID G EWRTFS +     ADPSR G A +PL+   ++++T I        G   K + + Q         S+SE +L   F  + ++A  + L  +I E A LL ++V D    K + +    A+ +A  YI+CR   V R+ K++     +  +++ +  K + K ++ +   +     +   C+ L + + I  AA ++A+KA +LD+V G  P +VAAAA+ + C
Sbjct:    2 SYRKAKIGCREHPDATLIE-DYRAGDMICSECGLVVGDRVIDVGSEWRTFSNE--KANADPSRVGAAENPLME-NNDLSTIIARAEPNSSGEGFKYSSKKQM--------SSSERSLLNGFKEISDMADKINLAKTIVERANLLFKQVHDSRTTKGRSND---AIASACLYISCRQEGVPRTFKEICAVSKVSKKEIGRCFKLILKALETNVDTITTGDFMVRFCSNLGLSSAIQKAATHIARKAVELDIVPGRSPISVAAAAIYMAC 254          
BLAST of mRNA_F-serratus_M_contig139.2800.1 vs. uniprot
Match: A0A484EHJ0_BRELC (TFIIB-type domain-containing protein n=2 Tax=Peronosporaceae TaxID=4777 RepID=A0A484EHJ0_BRELC)

HSP 1 Score: 127 bits (320), Expect = 6.770e-31
Identity = 85/259 (32.82%), Postives = 135/259 (52.12%), Query Frame = 0
Query:   11 CSDCKDATDIYFDARSGDVICRECGVVMGERLIDDGQEWRTFSTDDHAGR-ADPSRCGDAVSPLLSAESNMNTFIEGGNNKKQTGRLQKAEGMAAKESTSEVALRAC---FARVREIAHNLGLPSSIQEDACLLLRKVEDKGLFKVKRDPRGKAMCAAVTYITCRTWSVSRSMKDVSKAVDIPLRDVNKACKHVFKNMDIDKGAVRGTHLIPELCNKLEVPAFITMAAQNVAQKASKLDLVGGMMPSAVAAAAVLLVCS 265
            C +C  + D+  D  +GDV+CR CG+++GER+IDD  EWRTF+ DD  G  A  SR GD     L + S ++T++   + KK  G    ++      S+    ++      AR++E+A  L LP  I E A  +    E + +    R P  ++M  AV +I CR  S +RS+K+  +A  IP R + K+   + + + ++         +   C++L +P    M A  VAQKA +L+L  G  P AVAA+ + LV +
Sbjct:   10 CREC-GSKDVVTDFSAGDVVCRGCGMILGERIIDDSPEWRTFANDDRGGDPAAKSRVGDVADARLDSLS-LSTYLV--DPKKSGGGADSSKHKRPNISSDSAKVKRMQRNMARIQEVADYLSLPKKIVEVALDIYADAEKQEINM--RGPERESMAVAVLFIACRKASNARSLKEFEEASGIPKRRIGKSFMSLQRQLKLEVKQATTEEYVQRFCSRLGLPNKTQMIAHTVAQKADRLELSNGQPPVAVAASVIYLVAA 262          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig139.2800.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L4T7_9PHAE1.140e-9455.07TFIIB-type domain-containing protein n=2 Tax=Ectoc... [more]
A0A835YX77_9STRA3.320e-3535.00TFIIB-type domain-containing protein n=1 Tax=Tribo... [more]
H3HBD3_PHYRM4.790e-3433.08TFIIB-type domain-containing protein n=4 Tax=Peron... [more]
A0A024GL73_9STRA8.760e-3333.58TFIIB-type domain-containing protein n=2 Tax=Albug... [more]
A0A8J4ZHJ2_9CHEL1.130e-3233.33Transcription initiation factor IIB n=1 Tax=Nympho... [more]
A0A8K1CU27_PYTOL2.560e-3232.70Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
UPI0006451B5A9.790e-3232.32hypothetical protein n=1 Tax=Acytostelium subglobo... [more]
A0A8D3A2J0_SCOMX1.760e-3135.16Transcription initiation factor IIB n=4 Tax=Scopht... [more]
T1KYS9_TETUR4.740e-3132.09Transcription initiation factor IIB n=1 Tax=Tetran... [more]
A0A484EHJ0_BRELC6.770e-3132.82TFIIB-type domain-containing protein n=2 Tax=Peron... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000812Transcription factor TFIIBPRINTSPR00685TIFACTORIIBcoord: 24..44
score: 46.03
coord: 46..59
score: 47.14
coord: 62..83
score: 31.21
coord: 216..234
score: 24.21
coord: 163..182
score: 37.67
coord: 250..266
score: 32.94
IPR000812Transcription factor TFIIBPANTHERPTHR11618TRANSCRIPTION INITIATION FACTOR IIB-RELATEDcoord: 5..268
IPR013137Zinc finger, TFIIB-typePFAMPF08271TF_Zn_Ribboncoord: 9..52
e-value: 1.6E-12
score: 46.7
IPR013137Zinc finger, TFIIB-typePROSITEPS51134ZF_TFIIBcoord: 7..39
score: 8.665
NoneNo IPR availableGENE3D1.10.472.170coord: 9..204
e-value: 1.7E-48
score: 167.1
NoneNo IPR availableGENE3D1.10.472.10coord: 214..278
e-value: 3.6E-8
score: 35.4
NoneNo IPR availablePANTHERPTHR11618:SF13TRANSCRIPTION INITIATION FACTOR IIBcoord: 5..268
NoneNo IPR availableSUPERFAMILY57783Zinc beta-ribboncoord: 6..56
IPR013150Transcription factor TFIIB, cyclin-like domainPFAMPF00382TFIIBcoord: 121..187
e-value: 3.2E-6
score: 27.1
coord: 217..265
e-value: 1.4E-6
score: 28.3
IPR036915Cyclin-like superfamilySUPERFAMILY47954Cyclin-likecoord: 118..206
IPR036915Cyclin-like superfamilySUPERFAMILY47954Cyclin-likecoord: 211..266

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig139contigF-serratus_M_contig139:42846..56406 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig139.2800.1mRNA_F-serratus_M_contig139.2800.1Fucus serratus malemRNAF-serratus_M_contig139 42805..58262 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig139.2800.1 ID=prot_F-serratus_M_contig139.2800.1|Name=mRNA_F-serratus_M_contig139.2800.1|organism=Fucus serratus male|type=polypeptide|length=329bp
MNAFREYSMRCSDCKDATDIYFDARSGDVICRECGVVMGERLIDDGQEWR
TFSTDDHAGRADPSRCGDAVSPLLSAESNMNTFIEGGNNKKQTGRLQKAE
GMAAKESTSEVALRACFARVREIAHNLGLPSSIQEDACLLLRKVEDKGLF
KVKRDPRGKAMCAAVTYITCRTWSVSRSMKDVSKAVDIPLRDVNKACKHV
FKNMDIDKGAVRGTHLIPELCNKLEVPAFITMAAQNVAQKASKLDLVGGM
MPSAVAAAAVLLVCSLWKPAACRDVDGANGRRGGGKLKGTKGCLRTQQRT
GTASPPKGRGWRSVRRRCQQRKMCRWKR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000812TFIIB
IPR013137Znf_TFIIB
IPR013150TFIIB_cyclin
IPR036915Cyclin-like_sf