prot_F-serratus_M_contig139.2798.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_F-serratus_M_contig139.2798.1
Unique Name	prot_F-serratus_M_contig139.2798.1
Type	polypeptide
Organism	Fucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length	572

Homology

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BLAST of mRNA_F-serratus_M_contig139.2798.1 vs. uniprot
Match: D7FNK4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNK4_ECTSI)

HSP 1 Score: 357 bits (915), Expect = 1.130e-113
Identity = 231/502 (46.02%), Postives = 300/502 (59.76%), Query Frame = 0

Query:  144 IGHLKSIIGKDPDPPSVAAKMAAQYLVLSDHKSALKNFRLAMKRSPERVPSEQEINEREDKMRRLTILTKEKRADALAKIEAQIDTWRRQRETDERVRRENAATGIYRCLLELKQPVQAAEAARVRLRMCDTEDDRRQVMTEIHDSLLAYDGLVEEAATNQGAWLTESAGTLRDLHAFVLKNLLEY---ENASNLTRNLRRAASNGKRSIKTSGFPE---CTSSDSTRKSGGDAP-------IDNDQHQ----FDGREEDVRREGTYVATAKPGDFS---------------------------------EARRTRLFELGRLFARKRQFTASRQAFDEAMRDSPAEMRLRERNKANTRGFFLDTAQEESTPTIRVDLVSRWQSGVHADEARLHALLDFTGFTGVHRGADTLVTAVPSAGWADG----FSDLAYAERLSRLRAAAHPLHA-----------------------PAGAGAKTPQIANAAPGLLLGHVVPPEDV 568
            +G LKS + K PDPP+VAA++A  YLVLSD + ALK+F+LA K SPERVP+++E ++RE + RRL +L K++RA+ALA++EAQ     R+RE  E  RR  AATG+YRCLLE+KQPVQAAEAAR RL MC+T ++R+QV TEIH++LL YDGL+E  ATNQGAWLTESAG L DLHA VL++L  +   E +++ +     ++S G  +++    PE   C         GG          +  D ++     +G +  + +EG + AT   G  S                                 + RR+RL +LG L  RKRQFTASRQAFD+A R  P E  LRERNK  T GFF+D A EE++P IR++L SRWQ GV  D+ R  AL +FTGFTG+HRGA+TLV  VP+AGWADG     S++AYAERLSR R     L                           GAGAK P  A  A GL+L H+VP +DV
Sbjct:    4 VGQLKSTLAKAPDPPAVAAELALLYLVLSDQRGALKSFQLAAKPSPERVPTKEETDKREMQERRLMLLNKDRRAEALAQLEAQDAEREREREATEHARRRKAATGVYRCLLEMKQPVQAAEAARARLDMCETREERQQVETEIHETLLKYDGLIEPEATNQGAWLTESAGALSDLHADVLRSLTGFSMHEKSASPSSCWGTSSSGG--AMEAVDDPEEGSCAPGMEINHRGGGVETTGRAVGVSADGYRGNNLLEGGDSTLTKEGAFSATVCEGAGSSRGYTCGGNGPRDVAATTAEVAPDRMNNAEEERDVRRSRLQDLGHLLVRKRQFTASRQAFDDARRGGPDEASLRERNKGRTPGFFIDGALEEASPKIRLELDSRWQGGVETDDIRRRALANFTGFTGLHRGAETLVAVVPAAGWADGGNAIASEIAYAERLSRSRIQVDSLQQHVRTGGGATRGIGGAGACVAAGRAGGAGAKQPTAA--ASGLMLRHLVPAKDV 501

The following BLAST results are available for this feature:

BLAST of mRNA_F-serratus_M_contig139.2798.1 vs. uniprot

BLAST of mRNA_F-serratus_M_contig139.2798.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
D7FNK4_ECTSI	1.130e-113	46.02	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 220..240
IPR019734	Tetratricopeptide repeat	PROSITE	PS50005	TPR	coord: 158..191 score: 8.319
IPR019734	Tetratricopeptide repeat	PROSITE	PS50005	TPR	coord: 407..440 score: 7.67

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
F-serratus_M_contig139	contig	F-serratus_M_contig139:6377..14453 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Fucus serratus MALE	2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90	2022-09-16
OGS1.0 of Fucus serratus male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_F-serratus_M_contig139.2798.1	mRNA_F-serratus_M_contig139.2798.1	Fucus serratus male	mRNA	F-serratus_M_contig139 6048..14467 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_F-serratus_M_contig139.2798.1 ID=prot_F-serratus_M_contig139.2798.1|Name=mRNA_F-serratus_M_contig139.2798.1|organism=Fucus serratus male|type=polypeptide|length=572bp
MVVASEVQRKTLTPVIEYLDQKSREREEKHIADKRFISSVLELMRAEGQD
QVDWFERKRQPRLPTGTPSPGDSKRSKPPAASTPGTRERLGVEASEADGA
PPLITASNGQRCRQYRRVGKAQRSHQRQQTQPTFDCTAQAVATIGHLKSI
IGKDPDPPSVAAKMAAQYLVLSDHKSALKNFRLAMKRSPERVPSEQEINE
REDKMRRLTILTKEKRADALAKIEAQIDTWRRQRETDERVRRENAATGIY
RCLLELKQPVQAAEAARVRLRMCDTEDDRRQVMTEIHDSLLAYDGLVEEA
ATNQGAWLTESAGTLRDLHAFVLKNLLEYENASNLTRNLRRAASNGKRSI
KTSGFPECTSSDSTRKSGGDAPIDNDQHQFDGREEDVRREGTYVATAKPG
DFSEARRTRLFELGRLFARKRQFTASRQAFDEAMRDSPAEMRLRERNKAN
TRGFFLDTAQEESTPTIRVDLVSRWQSGVHADEARLHALLDFTGFTGVHR
GADTLVTAVPSAGWADGFSDLAYAERLSRLRAAAHPLHAPAGAGAKTPQI
ANAAPGLLLGHVVPPEDVAHP*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR019734	TPR_repeat