mRNA_F-serratus_M_contig1387.2789.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig1387.2789.1
Unique NamemRNA_F-serratus_M_contig1387.2789.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
BLAST of mRNA_F-serratus_M_contig1387.2789.1 vs. uniprot
Match: D7FYN9_ECTSI (Soluble NSF Attachment Protein (SNAP) Receptor (SNARE) n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FYN9_ECTSI)

HSP 1 Score: 332 bits (851), Expect = 3.630e-109
Identity = 167/209 (79.90%), Postives = 189/209 (90.43%), Query Frame = 3
Query:  396 MTSIVELFPKVRRLTFDLQTLMQYVEKGHASPDDAGMRLEELGRQLDLLDSFVGQERPSQREDWRRKLRELRSERDFLRDQLGRINQGRRKTSQEAREREELLARRHATLPTSVMDSYAEEGGSLLRSRRMVGEYMQVGQESLASLVGQRSRLKNAHRRVLDMTNVIGLSNSILRVANRREAVDKLLVLGGMIVTSAFLWWMWSRRNVS 1022
            MTSIVELFPK RRL+FDL+TL+QYVE+GHASPDDAGM LEE GRQLD+L+S VGQERP+QREDWRRKLRELR+E  FLRDQLGR +QGRRK  QEA+EREELLARRHA LP+SVMD+YAEEG SLLRSRRMVG+Y+Q GQ SL SLV QRSRLKNAHR+VLDM N++GLSNSILRV++RR+AVD+LLVLGG+IVTS FLWWMW RR  S
Sbjct:    1 MTSIVELFPKARRLSFDLRTLLQYVERGHASPDDAGMNLEEFGRQLDVLESLVGQERPTQREDWRRKLRELRNEHAFLRDQLGRFDQGRRKVGQEAKEREELLARRHAALPSSVMDAYAEEGSSLLRSRRMVGDYLQTGQASLTSLVEQRSRLKNAHRKVLDMANILGLSNSILRVSDRRQAVDRLLVLGGIIVTSVFLWWMWGRRVAS 209          
BLAST of mRNA_F-serratus_M_contig1387.2789.1 vs. uniprot
Match: A0A835ZDP4_9STRA (Soluble NSF attachment protein receptor n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDP4_9STRA)

HSP 1 Score: 259 bits (661), Expect = 1.750e-80
Identity = 131/208 (62.98%), Postives = 169/208 (81.25%), Query Frame = 3
Query:  396 MTSIVELFPKVRRLTFDLQTLMQYVEKGHASPDDAGMRLEELGRQLDLLDSFVGQERPSQREDWRRKLRELRSERDFLRDQLGRINQGRRKTSQEAREREELLARRHATLPTSVMDSYAEEGGSLLRSRRMVGEYMQVGQESLASLVGQRSRLKNAHRRVLDMTNVIGLSNSILRVANRREAVDKLLVLGGMIVTSAFLWWMWSRRNV 1019
            MTSIVELFPK RRL +DLQT +Q++EKGHAS DD G+ L+EL +QL +LDS   QERP+QRE+WRRKL+EL  ++DFLR+QL R N  R++  +EARERE LLARR+A LP+ V+D+YAEEG SLLRS+RM+G+Y+Q GQ +LASLV QR RLK   RRVLD+ NV+G+S SILR++ RREAVD+LLVLGGM+  +  L++ W+R+ V
Sbjct:    1 MTSIVELFPKARRLAYDLQTQIQFLEKGHASADDVGVSLDELEQQLKILDSLASQERPAQRENWRRKLKELVGDKDFLREQLDRYNNSRQRQGREAREREALLARRNAALPSGVVDAYAEEGSSLLRSQRMMGDYLQSGQAALASLVDQRHRLKGVQRRVLDIANVMGVSGSILRMSERREAVDRLLVLGGMVFITGLLYYAWARKGV 208          
BLAST of mRNA_F-serratus_M_contig1387.2789.1 vs. uniprot
Match: A0A7S2XZE9_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XZE9_9STRA)

HSP 1 Score: 181 bits (460), Expect = 1.270e-50
Identity = 100/212 (47.17%), Postives = 143/212 (67.45%), Query Frame = 3
Query:  399 TSIVELFPKVRRLTFDLQTLMQYVEKGHASPDDAGMRLEELGRQLDLLDSFVGQERPSQREDWRRKLRELRSERDFLRDQLGRINQGRRKTSQEAREREELLARRHATLPTSVMDSYAEEGGSLLRSRRMVGEYMQVGQESLASLVGQRSRLKNAHRRVLDMTNVIGLSNSILRVANRREAVDKLLVLGGMIVTSAFLW--WMWSRRNVSEV 1028
            TS+VEL PK R+L F+LQT    VE G A+ +D    L EL +QL++L+S V  ERP+QRE WR+KL EL+ + DFLR  L R         +E +ER+ELL RR   +P+SV+++Y EEG +L RS+ MV +    GQ  +A+L+ QRS LK+A R++LD+ N++GLS  ++R ANRR+A DK +V GGMI+T  FL+  + +S R+ + V
Sbjct:    4 TSVVELVPKARKLLFELQTQQTLVETGKANAEDVYFGLSELSQQLNILESLVNNERPAQRESWRKKLTELQRDVDFLRASLDRHVAKSSSGLREQQERQELLLRRTQAMPSSVVENYMEEGAALTRSQAMVEDLTYTGQAIMANLLDQRSTLKSAQRKILDLANLLGLSGVLMRSANRRDATDKWIVFGGMIITLGFLYFCYWYSTRSTTSV 215          
BLAST of mRNA_F-serratus_M_contig1387.2789.1 vs. uniprot
Match: W7U6N0_9STRA (Golgi snap receptor complex member 2 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U6N0_9STRA)

HSP 1 Score: 176 bits (445), Expect = 1.660e-48
Identity = 98/208 (47.12%), Postives = 135/208 (64.90%), Query Frame = 3
Query:  396 MTSIVELFPKVRRLTFDLQTLMQYVEKGHASPDDAGMRLEELGRQLDLLDSFVGQERPSQREDWRRKLRELRSERDFLRDQLGRINQGRRKTSQEAREREELLARRHAT-----LPTSVMDSYAEEGGSLLRSRRMVGEYMQVGQESLASLVGQRSRLKNAHRRVLDMTNVIGLSNSILRVANRREAVDKLLVLGGMIVTSAFLWWMW 1004
            MTS+ EL PK ++L F+LQ  ++ VE G+ SPD+  M L EL RQ+ +L + V QERP  RE W+R++ EL SE  FLR  L R  Q R K +QEA+EREELLARR+        P   ++   EEG S  RS  M+ + +  GQ +L++L+ QRS LK+A ++VLD+ N++G+S+ I  +A RR+ VDKL+V GGM VT   LW  W
Sbjct:    1 MTSVAELLPKTKKLAFELQGQVRQVEIGYVSPDNVFMGLGELERQISILHTLVAQERPGAREQWQRRIGELHSEAVFLRTVLNRFLQSRGKVAQEAKEREELLARRYGKGGDLEAPARAVEELLEEGASYQRSSAMMNDILMSGQATLSNLLDQRSSLKSARKKVLDVLNLLGVSHRITGMAERRDTVDKLIVAGGMAVTLLVLWLCW 208          
BLAST of mRNA_F-serratus_M_contig1387.2789.1 vs. uniprot
Match: A0A7S2CFP0_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CFP0_9STRA)

HSP 1 Score: 148 bits (373), Expect = 4.500e-38
Identity = 85/208 (40.87%), Postives = 125/208 (60.10%), Query Frame = 3
Query:  393 TMTSIVELFPKVRRLTFDLQTLMQYVEKGHASPDDAGMRLEELGRQLDLLDSFVGQERPSQREDWRRKLRELRSERDFLRDQLGRINQGRRKTSQEAREREELLARRHATLPTSVMDSYAEEGGSLLRSRRMVGEYMQVGQESLASLVGQRSRLKNAHRRVLDMTNVIGLSNSILRVANRREAVDKLLVLGGM--IVTSAFLWWMWSR 1010
            TMTS+VELFP+ R+L++DLQ  ++ VE    +P D  + LEEL RQ   L+  V QE  +++++W+ K+R++   RD+L  QL        + + E  ER+ELL R  ++LPTSV+ +Y EEG SL RS  +V   +    E++A L+ QR  LK   R+VLDM   +G+S S +R+  RR  VD  +V GGM  +    +L W W R
Sbjct:    5 TMTSVVELFPRTRKLSYDLQQQLREVEAKRMAPSDMELGLEELKRQTQTLEMLVEQE-VNRKDEWKAKIRDVCMTRDWLDSQLRHWRTQHDRAAVEEAERQELLGRVRSSLPTSVIGAYDEEGRSLSRSNNVVANLLDGAGEAMAELMDQREMLKGTQRKVLDMLTTLGVSKSTIRIIERRNVVDNAIVWGGMGFVTLCLYLLWRWVR 211          
BLAST of mRNA_F-serratus_M_contig1387.2789.1 vs. uniprot
Match: B8BUE6_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BUE6_THAPS)

HSP 1 Score: 147 bits (372), Expect = 5.740e-38
Identity = 85/207 (41.06%), Postives = 129/207 (62.32%), Query Frame = 3
Query:  396 MTSIVELFPKVRRLTFDLQTLMQYVEKGHASPDDAGMRLEELGRQLDLLDSFVGQERPSQREDWRRKLRELRSERDFLRDQLGRINQGRRKTSQEAREREELLARRHATL----PTSVMDSYAEEGGSLLRSRRMVGEYMQVGQESLASLVGQRSRLKNAHRRVLDMTNVIGLSNSILRVANRREAVDKLLVLGGMIVTSAFLWWMW 1004
            MTSIVELFPK R+L +D +  +  V+ G   P +  + L+EL RQLDL+++   +E P+QRE W+RK+ ELR +   +R+Q    ++      ++ +ER+ELLARR            M   +EE  SL  S  M+ + +  GQ SL++LVGQR R++  +R++LD+ N IGLSNS +R+  RR+A D  LV GGMIVT   +++++
Sbjct:    1 MTSIVELFPKSRKLAYDSRQQLSQVQNGLICPSELFLSLDELSRQLDLMENLTNKETPAQREIWKRKILELREDAQSIRNQGNHYDRMVSAGIRQRKERDELLARRRRNRGNGGDADEMQQLSEEADSLATSHGMMNDLLSSGQASLSNLVGQRQRMRWVNRKMLDIGNKIGLSNSTMRMIERRDATDAWLVFGGMIVTLLVIYFLY 207          
BLAST of mRNA_F-serratus_M_contig1387.2789.1 vs. uniprot
Match: K0RHB4_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0RHB4_THAOC)

HSP 1 Score: 141 bits (356), Expect = 2.190e-34
Identity = 89/229 (38.86%), Postives = 133/229 (58.08%), Query Frame = 3
Query:  336 RERQEASAP*LLLPL-LRASTMTSIVELFPKVRRLTFDLQTLMQYVEKGHASPDDAGMRLEELGRQLDLLDSFVGQERPSQREDWRRKLRELRSERDFLRDQLGRINQGRRKTSQEAREREELLARRHATLPTS-----VMDSYAEEGGSLLRSRRMVGEYMQVGQESLASLVGQRSRLKNAHRRVLDMTNVIGLSNSILRVANRREAVDKLLVLGGMIVTSAFLWWMW 1004
            R   ++S   +L P  + ASTMTSIVELFPK R++ +D +     V+ G   P +  + L+EL RQLD++ S   +E P+QR+ W RK+ ELR + D LR Q    ++      ++ REREEL+ RR     T       M   AEE  SL  S  M+ + +  GQ SL+SLV QR +++  +R+VL++ N +GLS S +R+  RR+  D  LV GGMI+T   ++ ++
Sbjct:   95 RNSAQSSNAGVLQPCSISASTMTSIVELFPKCRKICYDARQTAAQVQNGLIDPSNLFLSLDELSRQLDIMSSLAQKETPAQRQMWERKILELREDSDGLRRQGEHYDRMVGAGMRQRREREELMMRRRKNRTTGDGVADEMAQLAEEADSLASSHGMMNDLLASGQSSLSSLVNQRQKMRWINRQVLNIGNKLGLSQSTIRMIERRDTTDAYLVFGGMIITLLVIYCLY 323          
BLAST of mRNA_F-serratus_M_contig1387.2789.1 vs. uniprot
Match: A0A7S3PUS9_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3PUS9_9STRA)

HSP 1 Score: 136 bits (342), Expect = 1.250e-33
Identity = 85/211 (40.28%), Postives = 122/211 (57.82%), Query Frame = 3
Query:  396 MTSIVELFPKVRRLTFDLQTLMQYVEKGHASPDDAGMRLEELGRQLDLLDSFVGQERPSQREDWRRKLRELRSERDFLRDQLGRINQGRRKTSQEAREREELLARRHATLPTSVMDS------YAEEGGSLLRSRRMVGEYMQVGQESLASLVGQRSRLKNAHRRVLDMTNVIGLSNSILRVANRREAVDKLLVLGGMIVTSAFLWWMWSR 1010
            MTSIVELFPK R+L +D +  +  V+    S  +  + L+EL RQL +++  + +E P+QRE WRRK+ EL+ +   +R Q    ++      +  REREELL R          DS       AEE  SL  S+ MVGE +  GQ  L SL+ QR R++ A R VL++ N IGLSNS +R+  RR+  D  LVL GM++T   ++++W R
Sbjct:    2 MTSIVELFPKSRKLAYDARQQLSQVQNNLLSATELYISLDELQRQLSIIEQLLSRETPAQREIWRRKILELQEDASSIRRQGEYYHRMVNSNLRVQREREELLTRXXXXKKDGFGDSELGIQDLAEESTSLASSQNMVGELLMSGQAQLNSLIDQRRRMRGAKRMVLNIGNTIGLSNSTMRMIERRDENDVKLVLAGMVLTLLVIYFVWIR 212          
BLAST of mRNA_F-serratus_M_contig1387.2789.1 vs. uniprot
Match: A0A6U0P085_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A6U0P085_9STRA)

HSP 1 Score: 134 bits (338), Expect = 4.640e-33
Identity = 78/212 (36.79%), Postives = 123/212 (58.02%), Query Frame = 3
Query:  396 MTSIVELFPKVRRLTFDLQTLMQYVEKGHASPDDAGMRLEELGRQLDLLDSFVGQERPSQREDWRRKLRELRSERDFLRDQLGRINQGRRKTSQEAREREELLARRH-------ATLPTSVMDSYAEEGGSLLRSRRMVGEYMQVGQESLASLVGQRSRLKNAHRRVLDMTNVIGLSNSILRVANRREAVDKLLVLGGMIVTSAFLWWMWSR 1010
            MTS+ ELFPK R+L +D +  +  V+       +    L+EL RQL+++DS V Q+ P+QR+ W+RK+ ELR + + +R Q    ++      +E +EREEL+  RH            + M+ + EE  SL  S+ MVG+ +  GQ  L SL+ QR+R++   R VLDM + +GLSN+ +R+  RR+  D   V GGM +T   ++++W R
Sbjct:    1 MTSVNELFPKSRKLAYDARQQLCQVQNKSLHASELFFSLDELSRQLNIMDSLVSQQTPAQRQVWKRKILELREDANSIRRQGQYYDRMVSANVREQKEREELMTLRHRRGGRGRGDDAENAMNDFTEESESLAMSQNMVGDLLVSGQSQLNSLMDQRNRMRGVKRLVLDMGSKVGLSNATMRMIERRDTTDAYFVFGGMFLTILIIYFVWFR 212          
BLAST of mRNA_F-serratus_M_contig1387.2789.1 vs. uniprot
Match: A0A7S2XN21_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XN21_9STRA)

HSP 1 Score: 134 bits (336), Expect = 7.990e-33
Identity = 79/207 (38.16%), Postives = 124/207 (59.90%), Query Frame = 3
Query:  396 MTSIVELFPKVRRLTFDLQTLMQYVEKGHASPDDAGMRLEELGRQLDLLDSFVGQERPSQREDWRRKLRELRSERDFLRDQLGRINQGRRKTSQEAREREELLARRH----ATLPTSVMDSYAEEGGSLLRSRRMVGEYMQVGQESLASLVGQRSRLKNAHRRVLDMTNVIGLSNSILRVANRREAVDKLLVLGGMIVTSAFLWWMW 1004
            M SIVELFPK R+L +D +  +  V+ G   P +  M LEE+ R LD++++ + +E PSQRE WRRK+ ELR + + +R Q    ++      ++ RER+ LL+RR     AT     ++  A+E  S+  S+ M+G+ +  GQ SL  L+ QR R+K   R +LD+ + IGLSNS +R+  RR+  D   V GGM+V    +++++
Sbjct:    1 MASIVELFPKNRKLAYDARQQLAQVQNGLLPPSELFMLLEEISRSLDIMENLLSRETPSQREVWRRKILELRDDANSVRRQAEHYDRMVGANVRQQRERDALLSRRRRTRRATGEEGEINDLADEYQSMESSQIMMGDLLASGQASLTGLIEQRQRMKGVKRVMLDIGSKIGLSNSTMRIIERRDVTDAYFVFGGMVVCLLLMYFLY 207          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1387.2789.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FYN9_ECTSI3.630e-10979.90Soluble NSF Attachment Protein (SNAP) Receptor (SN... [more]
A0A835ZDP4_9STRA1.750e-8062.98Soluble NSF attachment protein receptor n=1 Tax=Tr... [more]
A0A7S2XZE9_9STRA1.270e-5047.17Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
W7U6N0_9STRA1.660e-4847.12Golgi snap receptor complex member 2 n=2 Tax=Monod... [more]
A0A7S2CFP0_9STRA4.500e-3840.87Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
B8BUE6_THAPS5.740e-3841.06Uncharacterized protein n=1 Tax=Thalassiosira pseu... [more]
K0RHB4_THAOC2.190e-3438.86Uncharacterized protein n=1 Tax=Thalassiosira ocea... [more]
A0A7S3PUS9_9STRA1.250e-3340.28Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]
A0A6U0P085_9STRA4.640e-3336.79Hypothetical protein n=1 Tax=Eucampia antarctica T... [more]
A0A7S2XN21_9STRA7.990e-3338.16Hypothetical protein n=1 Tax=Attheya septentrional... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1387contigF-serratus_M_contig1387:145658..149938 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score334.0
Seed ortholog evalue5.3e-89
Seed eggNOG ortholog2880.D7FYN9
Preferred nameGOSR2
KEGG rclassRC00004,RC00061,RC02742,RC02857
KEGG koko:K00627,ko:K03935,ko:K08496,ko:K19200
KEGG TC3.D.1.6
KEGG ReactionR00209,R02569,R11945
KEGG Pathwayko00010,ko00020,ko00190,ko00311,ko00620,ko01100,ko01110,ko01120,ko01130,ko01200,ko04130,ko04714,ko04723,ko04932,ko05010,ko05012,ko05016,map00010,map00020,map00190,map00311,map00620,map01100,map01110,map01120,map01130,map01200,map04130,map04714,map04723,map04932,map05010,map05012,map05016
KEGG ModuleM00143,M00307
Hectar predicted targeting categoryother localisation
GOsGO:0000139,GO:0000149,GO:0002682,GO:0002791,GO:0003674,GO:0005484,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005768,GO:0005770,GO:0005783,GO:0005789,GO:0005793,GO:0005794,GO:0005798,GO:0005801,GO:0006605,GO:0006623,GO:0006810,GO:0006886,GO:0006888,GO:0006891,GO:0006892,GO:0006896,GO:0006900,GO:0006901,GO:0006903,GO:0006906,GO:0006950,GO:0006986,GO:0006996,GO:0007034,GO:0007154,GO:0007165,GO:0008104,GO:0008150,GO:0009987,GO:0010008,GO:0010033,GO:0012505,GO:0012506,GO:0012507,GO:0015031,GO:0015833,GO:0016020,GO:0016021,GO:0016043,GO:0016050,GO:0016192,GO:0016197,GO:0016482,GO:0022607,GO:0023052,GO:0030133,GO:0030134,GO:0030135,GO:0030658,GO:0030659,GO:0030660,GO:0030662,GO:0030968,GO:0031090,GO:0031201,GO:0031224,GO:0031347,GO:0031410,GO:0031902,GO:0031982,GO:0031984,GO:0032879,GO:0032880,GO:0032991,GO:0033036,GO:0033116,GO:0033365,GO:0033554,GO:0034613,GO:0034620,GO:0034976,GO:0035966,GO:0035967,GO:0036498,GO:0042147,GO:0042175,GO:0042221,GO:0042886,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043933,GO:0044085,GO:0044422,GO:0044424,GO:0044425,GO:0044431,GO:0044432,GO:0044433,GO:0044440,GO:0044444,GO:0044446,GO:0044464,GO:0045088,GO:0045184,GO:0046907,GO:0048193,GO:0048194,GO:0048199,GO:0048207,GO:0048208,GO:0048280,GO:0048284,GO:0048583,GO:0050708,GO:0050776,GO:0050789,GO:0050794,GO:0050896,GO:0051046,GO:0051049,GO:0051179,GO:0051223,GO:0051234,GO:0051640,GO:0051641,GO:0051648,GO:0051649,GO:0051650,GO:0051656,GO:0051716,GO:0061024,GO:0061025,GO:0065003,GO:0065007,GO:0070201,GO:0070727,GO:0070887,GO:0071310,GO:0071702,GO:0071705,GO:0071840,GO:0072594,GO:0072665,GO:0072666,GO:0080134,GO:0090087,GO:0090114,GO:0090174,GO:0097708,GO:0098588,GO:0098791,GO:0098796,GO:0098805,GO:0098827,GO:1903530
EggNOG free text desc.vesicle fusion with Golgi apparatus
EggNOG OGsKOG3251@1,KOG3251@2759
EC1.6.5.3,1.6.99.3,2.3.1.12
COG Functional cat.U
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEbr01601,ko00000,ko00001,ko00002,ko01000,ko01002,ko04131
Exons4
Model size1532
Cds size636
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1387.2789.1prot_F-serratus_M_contig1387.2789.1Fucus serratus malepolypeptideF-serratus_M_contig1387 146159..149543 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929364.0068827-UTR-F-serratus_M_contig1387:145657..1461581622929364.0068827-UTR-F-serratus_M_contig1387:145657..146158Fucus serratus maleUTRF-serratus_M_contig1387 145658..146158 -
1690962817.4803188-UTR-F-serratus_M_contig1387:145657..1461581690962817.4803188-UTR-F-serratus_M_contig1387:145657..146158Fucus serratus maleUTRF-serratus_M_contig1387 145658..146158 -
1622929364.3799882-UTR-F-serratus_M_contig1387:149543..1499381622929364.3799882-UTR-F-serratus_M_contig1387:149543..149938Fucus serratus maleUTRF-serratus_M_contig1387 149544..149938 -
1690962817.5455365-UTR-F-serratus_M_contig1387:149543..1499381690962817.5455365-UTR-F-serratus_M_contig1387:149543..149938Fucus serratus maleUTRF-serratus_M_contig1387 149544..149938 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929364.3225641-CDS-F-serratus_M_contig1387:146158..1463321622929364.3225641-CDS-F-serratus_M_contig1387:146158..146332Fucus serratus maleCDSF-serratus_M_contig1387 146159..146332 -
1690962817.496581-CDS-F-serratus_M_contig1387:146158..1463321690962817.496581-CDS-F-serratus_M_contig1387:146158..146332Fucus serratus maleCDSF-serratus_M_contig1387 146159..146332 -
1622929364.3393133-CDS-F-serratus_M_contig1387:147730..1478681622929364.3393133-CDS-F-serratus_M_contig1387:147730..147868Fucus serratus maleCDSF-serratus_M_contig1387 147731..147868 -
1690962817.5042522-CDS-F-serratus_M_contig1387:147730..1478681690962817.5042522-CDS-F-serratus_M_contig1387:147730..147868Fucus serratus maleCDSF-serratus_M_contig1387 147731..147868 -
1622929364.3533883-CDS-F-serratus_M_contig1387:148554..1486811622929364.3533883-CDS-F-serratus_M_contig1387:148554..148681Fucus serratus maleCDSF-serratus_M_contig1387 148555..148681 -
1690962817.5229437-CDS-F-serratus_M_contig1387:148554..1486811690962817.5229437-CDS-F-serratus_M_contig1387:148554..148681Fucus serratus maleCDSF-serratus_M_contig1387 148555..148681 -
1622929364.3638506-CDS-F-serratus_M_contig1387:149346..1495431622929364.3638506-CDS-F-serratus_M_contig1387:149346..149543Fucus serratus maleCDSF-serratus_M_contig1387 149347..149543 -
1690962817.5364456-CDS-F-serratus_M_contig1387:149346..1495431690962817.5364456-CDS-F-serratus_M_contig1387:149346..149543Fucus serratus maleCDSF-serratus_M_contig1387 149347..149543 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig1387.2789.1

>prot_F-serratus_M_contig1387.2789.1 ID=prot_F-serratus_M_contig1387.2789.1|Name=mRNA_F-serratus_M_contig1387.2789.1|organism=Fucus serratus male|type=polypeptide|length=212bp
MTSIVELFPKVRRLTFDLQTLMQYVEKGHASPDDAGMRLEELGRQLDLLD
SFVGQERPSQREDWRRKLRELRSERDFLRDQLGRINQGRRKTSQEARERE
ELLARRHATLPTSVMDSYAEEGGSLLRSRRMVGEYMQVGQESLASLVGQR
SRLKNAHRRVLDMTNVIGLSNSILRVANRREAVDKLLVLGGMIVTSAFLW
WMWSRRNVSEV*
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mRNA from alignment at F-serratus_M_contig1387:145658..149938-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig1387.2789.1 ID=mRNA_F-serratus_M_contig1387.2789.1|Name=mRNA_F-serratus_M_contig1387.2789.1|organism=Fucus serratus male|type=mRNA|length=4281bp|location=Sequence derived from alignment at F-serratus_M_contig1387:145658..149938- (Fucus serratus male)
CGTACAGCTAGGAAGCTTCCGGGTCGCCGTCATCGTTACAAGTTGGATCT CACTCTGCTGTATATTGCCACCATTTGATCGATTTTAGACCCGCAGAGGA CAAAGTCGTCTTATGACCAAAAGAGGAAAGGAACTTGGCGCATCAAAATA TTTCACGGAAACCTGCTACACCTGTACAAGTTCTGTAGAACTGCAGCAGT TCATTGGCTCGTTAACGGTTTAGCGGCAGAGGCTTCTCCTCTCTGGTACG CCTCCTGCACCAACGTGTCACGCGACGGAAAGTCAATAGTTGGTGGCGTG GTTTTGTTGGAGGGGTGTAGATATCAGCAGCGCCTCGGGAACGTCAGGAG GCATCGGCACCCTGACTGCTGCTGCCGTTGTTGAGAGCGTCAACCATGAC ATCCATCGTGGAATTGTTCCCGAAGGTCCGTCGCTTGACGTTCGACCTTC AGACTTTGATGCAGTACGTCGAGAAGGGCCACGCCAGCCCGGACGATGCG GGTATGAGGCTGGAAGAGCTCGGTCGCCAACTTGATCTACTGGACTCCTT CGTGGGGCAGGAGCGGCCTTCCCAGAGAGAGGACTGGCGAAGGTGTGCCG TTCTGTCGCCTGGTGCGCATAGTCACGCCTTTCACAAAGATACAGTACTT GTACTGTGTACCTACCTTGAGGATTGGTGTAATGCGGTGTTGTATCATAA CCGCTACTATAAAGTACCGTAGTCTACTACATAATCAAGATGTACAGAAG GTCTACTGCACTATTAATAGTAGATGCGTTCAGATTTACTCTCAGCTCAG GCTACTGCTGTACCTGGTAGGATATATGCATAATTCGTGAACCATCTCTT GTTATAGCAGCAATGCGCCCTTCGCGACCCGCATGCCACTAGTAACTATT AACTATCAATACTGTCTCTTGACATCATTCATCAGTTGCAGACACTATGA TCGATTCGATTGTATCTGAGACGTACTCGGAGCAACGTTATTCGTCGTAC AACAGCAAGAAAGCAAGCGCACAGCTGTAGGACTTGCTGCACAAGCACTG CATCCGAGGTGCAGGAATAATCCGGCGACGAAATGCCTGTGTGAATCGCA GTGATGACACTTGGCACTACATTCAAGGGCGAGGGTTCTTGTATCGCTGG TTGTTACGCTGCGTCGAGTCCACGTTGTGAATTTCCCTGAGCGTGGACTG CTATTAATAACTCAAAGTAACTACCGGTGTCTCACGGGCGTCGCGTCCCA CATCCAGAAAGCTCCGGGAGCTCCGAAGCGAACGAGACTTTCTGCGAGAT CAGCTAGGAAGGATCAATCAGGGTCGTCGAAAGACAAGCCAGGAGGCTAG GGAGCGGGAGGAGCTGCTCGCTCGGAGACACGCTGTGAGCGAAATTCGAT ACAACCAGTACGAAATAAGTTAAAGGGCGCTGTGGTAGCAACCCTCGGAG AATCGCCGCCGAGAGCTTCTACTGGTGCGCTCTCGTGTGCAATAGACAGC CTACATTGCAGTGCAGCAAAAAAGCTACTGATACACATTGTTTGCGCTTT TCTGATGCCTGGCGGGTTTGGCGGGCTGCGCTGAGGGCGCACTCCTTTGG CTTTCTCGAGGCGGAATTGTACCGGTACAGCATAGACTTGGAAGTGCGTG GAACGGTTTCGGGTTATGACATATGAAGAGTTGTGGCGTCGCGGTGTTCC CGCCGAGGCATTTGTGACGCCTCGCGATGGTGCGTGCTCGGGCGCGTGAA TAACCTTCCTCTTTCGTCCCAGCGGACCAATGCGGTTTGACGTGTACATG ACTCAACCAACCACTGCAGCACAAGTACGGATGTCCCGATCGTGCGATGG CATTCCACACAGCTAAATATCAACACCGCCAACAACAGTGTCCACATTTT AGCCTCAGGGGTTTTGATAAAGCGCCAGAAGGCGTGTTTCCGCGGTTGGC GTTCGTCCCACCCCGAATCAAGTCTCAACTGCAAAATGTTTGACACGCTA ACGACGACGACGACAGGGCCGATGTCATCCATATCGCCGCCCTCTCCGAT TACCATACCCAAAACTTTAGACCCTGCCGACATCGGTGATGGACTCGTAC GCGGAGGAGGGTGGTTCGCTCTTGAGGTCTCGGAGGATGGTTGGAGAGTA CATGCAGGTCGGCCAAGAATCGCTGGCGAGCCTGGTGGGGCAGAGGTCGA GGTTGAAGGTGCGTTGTCCTTGTAGGCTCTTTCTTGACACACGCCTGTGT CGAATATCTGTTTCTCGTGTCGTCCGAGATTTTTACCGTTGCGTCCAGTC CTATTTCGTTCTGAATAGTCTATAGTTAAGTCTATTGTTATATTGGTATC GATGGTGGTGGTGCTAGAATAGGGCCATGGAGCTTTGTCGAAAGCTTCCA CTCCAGTGGTGTTTGCAGTCGTTGTACGGTACACTATTTATGGTTGAAAC ACCCTAGAAGGGGTAGATCATTGGCACTACTGATATTACGCTACCGTAGG TTAAAAACAGTCAAGAGGTGCGAGCGCGCGCATGCCGATCAGGCTATACT GCTTTAGTGCTATATTGCAACACTATTAATACTTGGTAGCAAGGATTCAA AATAAATCGTAAAAATGCGAAATAAAAGCCCCCCCCCCCCAAATAATACA AACAACACACACACACACATACTGCAATTGAATAAATACACAGACACACA CACACCCTTTATCGCGTCTGATCAGAGGTTTTCGTAACAAGTATCATTGA TCCCTCCTTGGGAGGATCAATGCGAGGTTTTCGTAGTAAGTATCATTGAT CCCCCCTCGGGAGGATCAATGCGAGTGGCATAGAATGACTATTAATAGGA TGACAGGGTCGGATTGCGCGGTTATGTGCAATTTAATAAATACACACACA CACACACACACACACCCTCGGGAGGATCAATGCGAGTGGCATGGAATGAC TAAGATGACATGGCCGGATTGCGCGGTTATGTGCAATTTAATAAACACAC ACACACACACACACACACACACACACACACACAGTATCATTGATCCCCCC TCGGGAGGATCAATGCGAGTGGCATGGAATGACTAGGATGACGGCCGGAT TGCGAACACACACATACACACACACACAGGTTTTCGTATCATTGATCCCC CCTCGGGAGGATCAATGCGAGTGGCATAGAATGACTAGGATGACAGGGCC GGATTGCGTGGTTATGTGCAATTTAATAAATACACACACACACACACACA CACACCTTTGTCTTTACAGACTGTTTTTCGTCGGAAGTTATTCGGTGCCT GGGACACGCTACCCGAATAAAAATTGTCAAATGCCGCTGTAGTCTTATCA CGTTCAAGACGTTCGACTGACTTCTCGAAATTTCAGGAGTCTTGCCAAGG ATGACCGAAAAATCTTAACGATCTACTGAGTATGAATCTACCAGCACCAT AAACTGGTCGTGAAACTTCACAGCCTGCATGTCTTTCGATGTGATCCTAT TTAATATGCTCTATATGTCGTAAGTATATCGTAACGCTGCACCCTACCCC CGGCTGACCTCGAACTCTCTCCTCAAAACCGTGGCGTCTTTGCTCTCGGC TGACAGAACGCCCATCGTAGAGTGCTCGATATGACCAACGTTATAGGCCT CAGCAACTCCATCCTGAGGGTGGCGAATAGGCGGGAAGCCGTGGACAAGC TCCTTGTACTGGGTGGAATGATCGTGACATCAGCATTTCTGTGGTGGATG TGGAGCAGAAGAAACGTTTCGGAAGTGTAAGGAAGTACCATGGACCATCT ATCATCAATAGGCCCTTTGTCGTCGGGAAGAAAAAAAAAGGTTCAGTCAT AGTGTGTGTTTGAGGGGTCCCGATCGACGTCGGACGGTGTGATCGGAAGG AAGACTATTACTAGCAATTGAATTACTCGGGAATGTGGGCGTGAAGTTTA TCGCTTGTTGAAGCGTCACAGCCCGAAGCGCTTTTTTGAAGAAAATTCAG AATGCGCCTAGGCTTTCTGAGCATCTGTTAGCATTCAGCTTCAAACGAAC GAACAAAAATAAATAGACTGTTTAAATATGAAGATGACTTCTTCGAGGTG GGCGGGATTTGGCCAGATTTTGCTGTCGGGAGCTGTTTCTGTCGTCATCC AATCCCATCACCCCATCACCCCATCACCAACATGCCGTTACTGTTTGTAC TTCATCCATGTGTTTCCTGATTTACGAATTGAGTCTTGCTAAACTTTTGG CTGTAATAGTGCTCCCCAGCGCGTGTGCCGT
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Coding sequence (CDS) from alignment at F-serratus_M_contig1387:145658..149938-

>mRNA_F-serratus_M_contig1387.2789.1 ID=mRNA_F-serratus_M_contig1387.2789.1|Name=mRNA_F-serratus_M_contig1387.2789.1|organism=Fucus serratus male|type=CDS|length=1272bp|location=Sequence derived from alignment at F-serratus_M_contig1387:145658..149938- (Fucus serratus male)
ATGACATCCATCGTGGAATTGTTCCCGAAGGTCCGTCGCTTGACGTTCGA
CCTTCAGACTTTGATGCAGTACGTCGAGAAGGGCCACGCCAGCCCGGACG
ATGCGGGTATGAGGCTGGAAGAGCTCGGTCGCCAACTTGATCTACTGGAC
TCCTTCGTGGGGCAGGAGCGGCCTTCCCAGAGAGAGGACTGGCGAAGATG
ACATCCATCGTGGAATTGTTCCCGAAGGTCCGTCGCTTGACGTTCGACCT
TCAGACTTTGATGCAGTACGTCGAGAAGGGCCACGCCAGCCCGGACGATG
CGGGTATGAGGCTGGAAGAGCTCGGTCGCCAACTTGATCTACTGGACTCC
TTCGTGGGGCAGGAGCGGCCTTCCCAGAGAGAGGACTGGCGAAGAAAGCT
CCGGGAGCTCCGAAGCGAACGAGACTTTCTGCGAGATCAGCTAGGAAGGA
TCAATCAGGGTCGTCGAAAGACAAGCCAGGAGGCTAGGGAGCGGGAGGAG
CTGCTCGCTCGGAGACACGCTAAAGCTCCGGGAGCTCCGAAGCGAACGAG
ACTTTCTGCGAGATCAGCTAGGAAGGATCAATCAGGGTCGTCGAAAGACA
AGCCAGGAGGCTAGGGAGCGGGAGGAGCTGCTCGCTCGGAGACACGCTAC
CCTGCCGACATCGGTGATGGACTCGTACGCGGAGGAGGGTGGTTCGCTCT
TGAGGTCTCGGAGGATGGTTGGAGAGTACATGCAGGTCGGCCAAGAATCG
CTGGCGAGCCTGGTGGGGCAGAGGTCGAGGTTGAAGACCCTGCCGACATC
GGTGATGGACTCGTACGCGGAGGAGGGTGGTTCGCTCTTGAGGTCTCGGA
GGATGGTTGGAGAGTACATGCAGGTCGGCCAAGAATCGCTGGCGAGCCTG
GTGGGGCAGAGGTCGAGGTTGAAGAACGCCCATCGTAGAGTGCTCGATAT
GACCAACGTTATAGGCCTCAGCAACTCCATCCTGAGGGTGGCGAATAGGC
GGGAAGCCGTGGACAAGCTCCTTGTACTGGGTGGAATGATCGTGACATCA
GCATTTCTGTGGTGGATGTGGAGCAGAAGAAACGTTTCGGAAGTGTAAAA
CGCCCATCGTAGAGTGCTCGATATGACCAACGTTATAGGCCTCAGCAACT
CCATCCTGAGGGTGGCGAATAGGCGGGAAGCCGTGGACAAGCTCCTTGTA
CTGGGTGGAATGATCGTGACATCAGCATTTCTGTGGTGGATGTGGAGCAG
AAGAAACGTTTCGGAAGTGTAA
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