mRNA_F-serratus_M_contig1387.2788.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig1387.2788.1 vs. uniprot
Match: D7FYP1_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FYP1_ECTSI) HSP 1 Score: 318 bits (814), Expect = 1.890e-98 Identity = 174/315 (55.24%), Postives = 217/315 (68.89%), Query Frame = 1
Query: 109 EQRKFTIHGPVYRERPLSVMLTSLLHRMLPISTQNYIRDAGFRPICDGGVALAAGVSAVARPQASMRFLAAGRQRRDHRYGSHPRQVIQVLQGVRLDDGNPPAG-----SPKLVIFVHGGAWGSGSTWMYRLVAYRLS-----RL-GYTVASLGYRVYPDADASGQVDDLAAAVRWISGHTVELGFDNSPEVFLVGHSSGAHIALLYLVRRAQQEDQ-KYRLEAFLEAGNGEVFQDGGGDEVT-----------NRGTINSGEGPRLEVEGFVGLSGVYDVYRHYLFESWRGVHEISPLKPANGGFLHMLFQHSY 984
E+++FTIHG V+R++P SV T LHR+LP+S Q RD FR + DGGVA+AAGVSAV RP + RFL+AGR+R DHRYG HPRQVI+V+ VR DDG + PKL++FVHGGAWGSGSTWMYRL+ RLS RL Y+VAS+GYRV+PDAD GQV+DLA A+RWIS +T +GFD PEV+L+GHSSGAHI +LYLV++A++ + A A G GG + I G +L+VEGF+GLSGVYDV+RHYL+ESWRGVHEISP+K ANGG LH L +S+
Sbjct: 6 EEQRFTIHGSVFRDKPGSVKTTGFLHRVLPVSAQRSFRDGAFRAVSDGGVAVAAGVSAVFRPGLAARFLSAGRRREDHRYGGHPRQVIEVVHPVR-DDGPSRSAVGDDEDPKLIVFVHGGAWGSGSTWMYRLMVDRLSHSHHPRLRSYSVASVGYRVHPDADTDGQVNDLAEAMRWISRNTGTMGFDRDPEVYLMGHSSGAHIGMLYLVQQAEERGMAEAEAAARANAPTGLPNIPGGXXXXXXXXXXXXXXXGDGDVIGEDGGRQLDVEGFIGLSGVYDVHRHYLYESWRGVHEISPMKAANGGRLHTLSDYSH 319
BLAST of mRNA_F-serratus_M_contig1387.2788.1 vs. uniprot
Match: B7FZB1_PHATC (Predicted protein (Fragment) n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FZB1_PHATC) HSP 1 Score: 149 bits (375), Expect = 1.200e-35 Identity = 106/279 (37.99%), Postives = 144/279 (51.61%), Query Frame = 1
Query: 166 MLTSLLHRMLPISTQNYIRDAG-FRPICDGGVALAAGVSAVARPQASMRFLAAGRQRRDHRYGSHPRQVIQV-LQGVRLDDGNPPAGSPKLVIFVHGGAWGSGSTWMYRLVAYRLSRLGYTVASLGYRVYPDADASGQVDDLAAAVRWISGHTVELGFDNSPEVFLVGHSSGAHIALLYLVRRAQQEDQKYRLEAFLEAGNGEVFQDGGGDEVTNRGTINSGEGPRLEVEGFVGLSGVYDVYRHYLFESWRGVHEISPLKPANGGFLHMLFQHSYPRLR 996
++T L L +++QN RD+G FR + D V L+A ++ P A FL +Q + RYG + Q I L + + +L+ FVHGGAWGSG WMYRLVA LGY VA +GYR YPD QV DL A +++ T + +V ++GHSSGAHIALL+LV R F+ + V +G GD ++ FVGLSG YD+ H+ +E+ RGV E+SPLKPANG + F+ P LR
Sbjct: 89 VVTRALGAWLSVASQNRFRDSGGFRRLVDFLVVLSAPAIPLSAPSAGWNFLMLTKQVKKLRYGLNSLQYIDFFLPYDPAETFTNTRSARRLIFFVHGGAWGSGEPWMYRLVAGAFLELGYAVAIVGYRTYPDGTVVDQVADLRDAAAFLA-QTHPAWCER--QVTVMGHSSGAHIALLFLVDR------------FITSTKLSVTANGSGD---------------FRIDSFVGLSGPYDISHHFDYEANRGVEEMSPLKPANG-YTRQSFRTHSPALR 336
BLAST of mRNA_F-serratus_M_contig1387.2788.1 vs. uniprot
Match: A0A7S1ZUJ4_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1ZUJ4_9STRA) HSP 1 Score: 144 bits (362), Expect = 5.030e-34 Identity = 102/279 (36.56%), Postives = 147/279 (52.69%), Query Frame = 1
Query: 169 LTSLLHRMLPISTQNYIRD-AGFRPICDGGVALAAGVSAVARPQASMRFLAAGRQRRDHRYGSHPRQVIQV-LQGVRLDDGNPPAGSPKLVIFVHGGAWGSGSTWMYRLVAYR-LSRLGYTVASLGYRVYPDADASGQVDDLAAAVRWISGHTVEL------------GFDNSPEVF---LVGHSSGAHIALLYLVRRAQQEDQKYRLEAFLEAGNGEVFQDGGGDEVTNRGTINSGEGPRLEVEGFVGLSGVYDVYRHYLFESWRGVHEISPLKPANG 951
+T L +LP+S+QN RD GFR + D V L+ + A+ +P A+ FL + + RYGSH Q +++ L N G LV FVHGGAWGSG WMYRLVA L L V +GYR YPDA+ S QVDDL +A + +L G D++ E ++GHSSGAHIA L L++ + + +++ ++ + E++ + ++ + FVGLSG YD+ H+ +E+ RGV EISP+KPA G
Sbjct: 1 MTRALGALLPLSSQNKFRDNGGFRSLADTSVLLSTPLIALTKPHAAANFLKLSKSYEEIRYGSHDMQRMELYLPSSTTTSDNDVRG---LVFFVHGGAWGSGMPWMYRLVALPFLEELRMAVVIVGYRTYPDANVSEQVDDLVSAAIEFARVKPDLIQKKKKYKNNTRGGDDTNEWLGNSIIGHSSGAHIAFLMLLKHLCLKSK------LIKSQRNKLKE----KEISKIDMSSLSSILGIDFDSFVGLSGPYDISHHFDYEAGRGVEEISPMKPACG 266
BLAST of mRNA_F-serratus_M_contig1387.2788.1 vs. uniprot
Match: A0A1Z5KRD0_FISSO (AB hydrolase-1 domain-containing protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KRD0_FISSO) HSP 1 Score: 138 bits (347), Expect = 1.210e-31 Identity = 109/303 (35.97%), Postives = 147/303 (48.51%), Query Frame = 1
Query: 169 LTSLLHRMLPISTQNYIRDAG-FRPICDGGVALAAGVSAVARPQASMR-FLAAGRQRRDHRYGSHPRQVIQVLQGVRLDDGNPPAGSPKLVIFVHGGAWGSGSTWMYRLVAYRL---SRLGYTVASLGYRVYPDADA-SGQVDDLAAAVRWISGHTVELGFDNSPEVFLVGHSSGAHIALLYLVRRAQQEDQKYRLEAFLEAGNGEVFQDGGGDEVTNRGTINSGEGPRLEVEGFVGLSGVYDVYRHYLFESWRGVHEISPLKPANGGFLHMLFQHSYPRLR-QPWSVQGTKRAGSIGDAPKP 1056
LT L +LP+ QNY RD+G FR I D V +A + A+ P +++R FL R H YG HP Q I++ N LV FVHGGAWGSG W YRL+A R VA +GYR YP + QV+D A ++ +L + ++GHSSGAH+ALL LV +A++ +K + A EA + S V FVGLSG YD+ H+ +E+ RGV E+SP+KP G + F+ + P LR Q + V G IG P
Sbjct: 109 LTRYLSTILPLRLQNYTRDSGLFRCIVDHLVQASAPLMALTAPSSALRDFLYLTSVMRKHAYGDHPMQFIELYMSSERPVRN-------LVFFVHGGAWGSGMPWFYRLMAAPFVCCDRPDTAVAVIGYRTYPSSPTVDEQVEDCQLAANYLLQEYPDLC---QGIITVMGHSSGAHVALLMLVEQAKEWMRKRKSAAREEA------------------AVAS-----FNVTNFVGLSGPYDISHHFDYEASRGVEELSPMKPVCG-YSREAFRRNSPHLRLQHFLVNGGNEESLIGQCMPP 377
BLAST of mRNA_F-serratus_M_contig1387.2788.1 vs. uniprot
Match: A0A8J5XXD4_DIALT (Abhydrolase_3 domain-containing protein n=2 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XXD4_DIALT) HSP 1 Score: 135 bits (340), Expect = 2.190e-31 Identity = 95/265 (35.85%), Postives = 136/265 (51.32%), Query Frame = 1
Query: 166 MLTSLLHRMLPISTQNYIRDAGFRPICDGGVALAAGVSAVA-RPQASMRFL-AAGRQRRDHRYGSHPRQVIQVLQGVRLDDGNPPAGSPKLVIFVHGGAWGSGSTWMYRLVAYRLSRLGYTVASLGYRVYPDADASGQVDDLAAAVRWISGHTVELGFDNSPEVFLVGHSSGAHIALLYLVRRAQQEDQKYRLEAFLEAGNGEVFQDGGGDEVTNRGTINSGEGPRLEVEGFVGLSGVYDVYRHYLFESWRGVHEISPLKPANGG 954
++T LHR LP+ Q+ +RD+G + +A +A+A RP A R + A+ R YG P+ + + + L PA P +++FVHGGAWGSGS +YRLV RL+ G+T LGYR YP A QV+D+A A+ W + + E G + + V +GHSSGAH+A + ++RRA+ RL + G++GVYD+ RH FE RGVHE+SP+KPA GG
Sbjct: 7 LVTRALHRALPLWMQHGMRDSGLLGVSVDMATIAGAAAALAARPAALTRLVRASATSRLGVAYGPLPQHRLDIFEPAPLHAPARPA--PDVIVFVHGGAWGSGSRLIYRLVGERLAAEGFTCLVLGYRRYPRASMEEQVNDVARALEW-AADSAEFG-ERARHV--LGHSSGAHVASMAVMRRARA-----RLAPLCSS--------------------------------LTGVAGVYDIARHLDFERGRGVHEVSPMKPAAGG 228
BLAST of mRNA_F-serratus_M_contig1387.2788.1 vs. uniprot
Match: A0A1Z5JJK0_FISSO (Prenylcysteine alpha-carboxyl methylesterase n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JJK0_FISSO) HSP 1 Score: 136 bits (342), Expect = 5.670e-31 Identity = 103/279 (36.92%), Postives = 141/279 (50.54%), Query Frame = 1
Query: 172 TSLLHRMLPISTQNYIRDAG-FRPICDGGVALAAGVSAVARPQASMR-FLAAGRQRRDHRYGSHPRQVIQVLQGVRLDDGNPPAGSPKLVIFVHGGAWGSGSTWMYRLVAYR-LSRLGYTVASLGYRVYPDA-DASGQVDDLAAAVRWISGHTVELGFDNSPEVFLVGHSSGAHIALLYLVRRAQQEDQKYRLEAFLEAGNGEVFQDGGGDEVTNRGTINSGEGPRLEVEGFVGLSGVYDVYRHYLFESWRGVHEISPLKPANGGFLHMLFQHSYPRLR 996
T L +LP+ QNY RD+G FR I D V +A + A+ P +++R FL+ + H YGSHP Q I++ L P LV FVHGGAWGSG W YRL+A + R VA +GYR YP + QV+D A ++ EL + ++GHSSGAH+ALL LV +Q +++ R F E + V V FVGLSG YD+ H+ +E+ RGV E+SP+KP G + F+ + P LR
Sbjct: 113 TRYLSTVLPLRLQNYTRDSGLFRWIVDHLVQASAPLMALTAPSSALRDFLSLTSIMQKHAYGSHPMQYIELY----LPSERPVR---NLVYFVHGGAWGSGVPWFYRLLAAPFVCRRDTAVAVIGYRTYPSSRTVDEQVEDCQRAANYLLQEYPELC---QGIITVMGHSSGAHVALLMLV---EQANKRMRQRKFTEREDAAVAS--------------------FNVTNFVGLSGPYDISHHFDYEAARGVEELSPMKPVCG-YSREAFRRNSPHLR 357
BLAST of mRNA_F-serratus_M_contig1387.2788.1 vs. uniprot
Match: A0A7S2MJ95_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2MJ95_9STRA) HSP 1 Score: 131 bits (329), Expect = 1.600e-30 Identity = 84/217 (38.71%), Postives = 116/217 (53.46%), Query Frame = 1
Query: 343 RYGSHPRQVIQVLQGVRLDDGNPPAGSPKLVIFVHGGAWGSGSTWMYRLVAYRLSRLGYTVASLGYRVYPDADASGQVDDLAAAVRWISGHTVELGFDNSPEVF--LVGHSSGAHIALLYLVRR--AQQEDQKYRLEAFLEAGNGEVFQDGGGDEVTNRGTINSGEGPRLEVEGFVGLSGVYDVYRHYLFESWRGVHEISPLKPANGGFLHMLFQHS 981
RYG H QV+ +L+ P + +V+FVHGGAWGSG WMYRL + +G VA +GYR YPDAD GQV+D+ A+ ++ +L +N LVGHS+GAHI+ L +++R A E +K E+ +VF INS F+GLSGVY++ H+ FES RGV E+SPLKP G + ++S
Sbjct: 7 RYGDHSMQVLHLLEPK-----GPAVATRGVVVFVHGGAWGSGKPWMYRLASIPFLEMGLAVAIVGYRTYPDADVDGQVEDVERAMEDLARRRPDLLQNNRGGGISALVGHSTGAHISFLTVLKRSKAHMEAEKQGKESK------DVF-------------INS----------FIGLSGVYNIQNHFEFESGRGVEEMSPLKPVCGFSVENFIENS 189
BLAST of mRNA_F-serratus_M_contig1387.2788.1 vs. uniprot
Match: A0A7S1UA30_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UA30_9STRA) HSP 1 Score: 127 bits (320), Expect = 1.560e-28 Identity = 104/257 (40.47%), Postives = 134/257 (52.14%), Query Frame = 1
Query: 217 IRDAGFRPICDGGVALAAGVS-AVARPQASMRFLAAGRQRRDHRYGSHPRQVIQVLQGVRLDDGNPPAGSPKLVIFVHGGAWGSGSTWMYRLVAYRLS-RLGYTVASLGYRVYPDADASGQVDDLAAAVRWI---SGHTVELGFDNSPEVFLVGHSSGAHIALLYLVRRAQQEDQKYRLEAFLEAGNGEVFQDG----GGDEVTNRGTINSGEGPRLEV--EGFVGLSGVYDVYRHYLFESWRGVHEISPLKPANGG 954
+R+ G G ALA G+ AV +P +L R D YG+ Q + V+ R D AG+ +V+F HGGAWGSG+ YR A RLS + TVA +GY VYP A A GQV +A A RW +G V D V L GHSSGAHI L + A E AG G+ +DG G + + T + E RL V +GFVGL+GVYD+ +HY FE+ RGV ++SP+KPA GG
Sbjct: 35 VRNVGLVRGLSDGSALATGLRRAVDKPALIGAYLRPQRAVLDVTYGAAAEQRLDVVP--RRSDA--AAGARPVVLFFHGGAWGSGTKLFYRNFARRLSDEVDATVAVVGYPVYPTATAWGQVSSVALATRWARSPAGRAVLGAADVDAGVLLCGHSSGAHITSLSAIWAA---------EDVANAGFGDRDEDGDEAPGLKHMIHAATEVTVE-ERLAVLPDGFVGLAGVYDIRKHYAFETSRGVADVSPMKPACGG 277
BLAST of mRNA_F-serratus_M_contig1387.2788.1 vs. uniprot
Match: A0A2D4C7I8_PYTIN (Abhydrolase_3 domain-containing protein n=2 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C7I8_PYTIN) HSP 1 Score: 126 bits (317), Expect = 4.150e-28 Identity = 81/208 (38.94%), Postives = 104/208 (50.00%), Query Frame = 1
Query: 346 YGSHPRQVIQVLQGVRLDDGNPPAGSPK--LVIFVHGGAWGSGSTWMYRLVAYRLSRLGYTVASLGYRVYPDADASGQVDDLAAAVRWISGHTVELGFDNSPEVFLVGHSSGAHIALLYLVRRAQQEDQKYRLEAFLEAGNGEVFQDGGGDEVTNRGTINSGEGPRLEVEGFVGLSGVYDVYRHYLFESWR------GVHEISPLKPA 945
YGSHPR I V G P P+ L++FVHGGAW G W Y LV L++ G+ VA + YR YP + Q D+ A+ W++ H G D +FL+GHSSGAHI+ L LV+ A + EA E T R V+GF+GL+G YD+ HY+FES R GVHEIS +KPA
Sbjct: 103 YGSHPRNTIDVY-------GVEPQAEPRKPLLLFVHGGAWSFGHKWQYGLVGKYLAKHGFLVAVINYRTYPLGSVTEQTKDVEDAIHWVAEHAPGYGGDRE-RIFLIGHSSGAHISALTLVQSAVNA-----ITGAAEA-----------SETTGR--------VHHHVKGFIGLAGPYDIAEHYVFESRRQVGPFNGVHEISTMKPA 278
BLAST of mRNA_F-serratus_M_contig1387.2788.1 vs. uniprot
Match: A0A7S1FPP3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1FPP3_9STRA) HSP 1 Score: 124 bits (312), Expect = 7.030e-28 Identity = 91/280 (32.50%), Postives = 136/280 (48.57%), Query Frame = 1
Query: 136 PVYRERPLSVMLTSLLHRMLPISTQNYIRDAGF-RPICDGGVALAAGVSAVAR--PQASMRFLAAGRQRRDHRYGSHPRQVIQVLQGVRLDDGNPPAGSPKLVIFVHGGAWGSGSTWMYRLVAYR-LSRLGYTVASLGYRVYPDADASGQVDDLAAAVRWISGHTVELGFDNSPEVFLVGHSSGAHIALLYLVRRAQQEDQKYRLEAFLEAGNGEVFQDGGGDEVTNRGTINSGEGPRLEVEGFVGLSGVYDVYRHYLFESWRGVHEISPLKPANGGFLH 963
P++ P + + P S ++++ G R + D V L G+ AV + P A F+ R+ YG+H Q I +++ N + S +V+FVHGGAWGSG WMYRL L + TVA +GYR YPD D SGQ+ D++ A+ ++ +L ++ LVGHSSGAHI+LL+L+ A++E I + ++ FV LSG+YD+ HY E RGV +ISP++ A G L+
Sbjct: 78 PLFTSDPNDDIFRKIRRSHWPDSVEHWLTANGITRFLSDTLVVL--GMPAVLKEYPGALDSFIDLTRKTTKISYGTHHSQFIDLIE-------NTSSSSDGVVVFVHGGAWGSGLPWMYRLCTLPFLEQQNKTVAVIGYRTYPDTDLSGQISDVSMAIGKLADQRPDLLSNDGSISALVGHSSGAHISLLHLLDAAKEE-------------------------------IMQSSTTYIPIQQFVALSGIYDIAAHYEHEKGRGVDQISPMRVACGPVLN 317 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1387.2788.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig1387.2788.1 >prot_F-serratus_M_contig1387.2788.1 ID=prot_F-serratus_M_contig1387.2788.1|Name=mRNA_F-serratus_M_contig1387.2788.1|organism=Fucus serratus male|type=polypeptide|length=427bp MSSSSSIKNGLETKSQRNGFNASAEQRKFTIHGPVYRERPLSVMLTSLLHback to top mRNA from alignment at F-serratus_M_contig1387:69992..82234+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig1387.2788.1 ID=mRNA_F-serratus_M_contig1387.2788.1|Name=mRNA_F-serratus_M_contig1387.2788.1|organism=Fucus serratus male|type=mRNA|length=12243bp|location=Sequence derived from alignment at F-serratus_M_contig1387:69992..82234+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig1387:69992..82234+ >mRNA_F-serratus_M_contig1387.2788.1 ID=mRNA_F-serratus_M_contig1387.2788.1|Name=mRNA_F-serratus_M_contig1387.2788.1|organism=Fucus serratus male|type=CDS|length=2562bp|location=Sequence derived from alignment at F-serratus_M_contig1387:69992..82234+ (Fucus serratus male)back to top |