mRNA_F-serratus_M_contig1380.2762.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig1380.2762.1
Unique NamemRNA_F-serratus_M_contig1380.2762.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
BLAST of mRNA_F-serratus_M_contig1380.2762.1 vs. uniprot
Match: D7FW21_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FW21_ECTSI)

HSP 1 Score: 469 bits (1208), Expect = 2.550e-153
Identity = 278/448 (62.05%), Postives = 318/448 (70.98%), Query Frame = 1
Query:  124 EDDLPSALTLLANVEALLGEDDDDNDDAAVRLPHYEEIDSVPENEELTLLREMSEQNLLHNRDLRQVMVVIGKHLIRDQVTVEYASRIRRLVQGMKSGRLRPDLVCFTGGRVWDNKVADASAGYVFFRHLCEQQGVDLYNTGFLVESESSCTKEAMMNVVREVSRLEREELQQDMDKEQEEEMQQKEAAAVGERVRKKPRQKYHFTLISHEYHLSRVIMVHEISETVSLLSPLKQLDASWGYEHVPYPYACYDDANKKFQADVYKTLEELVPLQVNVQAVARREEFFQEENYASLTHVRARVGDFIRQVHSSSGPLARHMNLVDLQRAAEQGRRGKMGTFPAGSVTTLRLDEALEWAAGALAKIQEIIEPAATRRNSVSLRAWAMCAALLEKAILQGQMAADPDRPLYPHEWGLLEDENPQEDAQ--GDSKVTSRRARETLYAVLEEE 1461
            ED LP A+ L+  ++ LL  D     DA  RLPH E       +EE   L +MSE + L N +LRQV+VVIGKHLIRDQVTVEYASRIRRLVQG+KSGRL+PDLVCFTGG V DN+VADASAGYVFFRHLCEQ  V   N G LVESES+CTKEA+ NVV+EVSR+EREEL      E+E E + + AA         PRQKYHFTLIS+EYHLSR+I VH+ISETVSLL+PLK L+ASWGYE VPYPYAC +D  K+FQA+VYKTLE+LVPLQVNVQAVA REEFFQEENYASL HVR R+ +FIR+++    P        D  +A                     L EAL WAAGALAKIQEIIEPAA RRNSVSLR WAMCAALLE+AILQ QM+ADPDRPL P EWG LEDE P        +  +  RRARE + A L E+
Sbjct:  310 EDQLPDAIELIDRLDELLALDPPSESDA--RLPHPE----AEPDEETVRLMQMSEDDQLLNPELRQVLVVIGKHLIRDQVTVEYASRIRRLVQGLKSGRLQPDLVCFTGGTVRDNRVADASAGYVFFRHLCEQHEVGTENIGILVESESTCTKEALDNVVKEVSRMEREELH-----EREREGEGRSAAW--------PRQKYHFTLISNEYHLSRIITVHQISETVSLLAPLKLLEASWGYEQVPYPYACSNDDAKEFQANVYKTLEDLVPLQVNVQAVANREEFFQEENYASLVHVRERLKEFIRRMN----PSRERNERADNDKA---------------------LREALVWAAGALAKIQEIIEPAAARRNSVSLRGWAMCAALLERAILQAQMSADPDRPLTPAEWGRLEDEKPPTPPLEVDEEDLIGRRARENVRAFLRED 713          
BLAST of mRNA_F-serratus_M_contig1380.2762.1 vs. uniprot
Match: A0A6H5JCZ4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCZ4_9PHAE)

HSP 1 Score: 348 bits (894), Expect = 9.060e-110
Identity = 205/331 (61.93%), Postives = 240/331 (72.51%), Query Frame = 1
Query:  505 RHLCEQQGVDLYNTGFLVESESSCTKEAMMNVVREVSRLEREELQQDMDKEQEEEMQQKEAAAVGERVRKKPRQKYHFTLISHEYHLSRVIMVHEISETVSLLSPLKQLDASWGYEHVPYPYACYDDANKKFQADVYKTLEELVPLQVNVQAVARREEFFQEENYASLTHVRARVGDFIRQVHSSSGPLARHMNLVDLQRAAEQGRRGKMGTFPAGSVTTLRLDE----------ALEWAAGALAKIQEIIEPAATRRNSVSLRAWAMCAALLEKAILQGQMAADPDRPLYPHEWGLLEDENPQED-AQGDSK-VTSRRARETLYAVLEEE 1461
            R +C    VD  N G LVESES+CTKEA+ NVV+EVSR+EREEL      E+E E + + AA         PRQKYHFTLIS+EYHLSR+I VH+ISETVSLL+PLK L+ASWGYE VPYPYAC +D  K+FQADVYKTLE+LVPLQVNVQAVA REEFFQEENY SL HVR R+ +FIR+++SS  P A+  NL D+++ A++GRRG        S T    +E          AL WAAGALAKIQEIIEPAATRRNSVSLR WAMCAALLE+AILQ QM+ADPDRPL P EWG LEDE P     + D K +  RRAR+ + A L E+
Sbjct:   10 RSVCHVVQVDTENIGILVESESTCTKEALDNVVKEVSRMEREELH-----EREREGEGRSAAW--------PRQKYHFTLISNEYHLSRIITVHQISETVSLLAPLKLLEASWGYEQVPYPYACSNDDAKEFQADVYKTLEDLVPLQVNVQAVANREEFFQEENYTSLVHVRERLKEFIRKMNSSRRPRAKAANLADVRKGADRGRRGXXXXXXXKSDTLRERNECANNEKTLRKALVWAAGALAKIQEIIEPAATRRNSVSLRGWAMCAALLERAILQVQMSADPDRPLTPAEWGRLEDEKPPTPPVEVDEKDLIGRRARDNVRAFLRED 327          
BLAST of mRNA_F-serratus_M_contig1380.2762.1 vs. uniprot
Match: A0A7S1TFF2_9RHOD (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1TFF2_9RHOD)

HSP 1 Score: 163 bits (413), Expect = 8.760e-42
Identity = 117/361 (32.41%), Postives = 174/361 (48.20%), Query Frame = 1
Query:  301 HNRDLRQVMVVIGKHLIRDQVTVEYASRIRRLVQGMKSGRLRPDLVCFTGGRVWDN-KVADASAGYVFFRHLCEQQGVDLYNTGFLVESESSCTKEAMMNVVREVSRLEREELQQDMDKEQEEEMQQKEAAAVGERVRKKPRQKYHFTLISHEYHLSRVIMVHEISETVSLLSPLKQLDASWGYEHVPYPYACYDDANKKFQADVYKTLEELVPLQVNVQAVARREEFFQEENYASLTHVRARVGDFIRQVHSSSGPLARHMNLVDLQRAAEQGRRGKMGTFPAGSVTTLRL-DEALEWAAGALAKIQEIIEPAATRRNSVSLRAWAMCAALLEKAILQGQMAADPDRPLYPHEWGLLEDE 1377
            H      V VV+GK LIRDQVT E+A RI  LV+ +K G+L+PD+VCFTGGR  +N   + A+AGY+FFR LCEQ  VDL    F++E  S  ++ ++ NV+  +  L                            +  +   + HFT +S +YHL R+  VH ++  +SLL PL+ + A+W Y    YP+   DD    F   V   L EL  + V++  V     FF  EN   L H +A++ +  R +HS  G          ++ + EQ           G  T +R+  E +E A  +L ++  +I P A      S        +LLE+ +L+ +   DPD P+   EW  L +E
Sbjct:   40 HLSSTTHVAVVLGKRLIRDQVTKEFARRITTLVKQIKVGQLKPDVVCFTGGRSEENASTSQAAAGYMFFRSLCEQAEVDLDGIQFMLEEISLNSRASLANVLHSLKSL----------------------------LGTQSVNRCHFTFVSSDYHLFRLQEVHRLNPRLSLLHPLEVVAATWHYLFTFYPFCVSDDPKTAFLGRVVVLLNELAIVMVDINGVIDGVSFFNRENLTRLRHTQAKLAEMYRLIHSPGG----------IKTSGEQK----------GFRTDMRIYSEKIEVAISSLREVNSLIAPLAESGPQPSREDIEKARSLLERVLLRLRRHLDPDSPVVWTEWQPLIEE 352          
BLAST of mRNA_F-serratus_M_contig1380.2762.1 vs. uniprot
Match: A0A7S1TXW1_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TXW1_9STRA)

HSP 1 Score: 154 bits (389), Expect = 2.260e-37
Identity = 124/368 (33.70%), Postives = 190/368 (51.63%), Query Frame = 1
Query:  301 HNRDLRQVMVVIGKHLIRDQVTVEYASRIRRLVQ---GMKSGRLR-PDLVCFTGGRVWDNKVADASAGYVFFRHLCEQQGVDLYNTGFLVESESSCTKEAMMNVVREVSRLEREELQQDMDKEQEEEMQQKEAAAVGERVRKKPRQKYHFTLISHEYHLSRVIMVHEISETVSLLSPLKQLDASWGYEHVPYPYACYDDANKKFQADVYKTLEELVPLQVNVQAVARREEFFQEENYA-------SLTHVRARVGDFIRQVHSSSGPLARHMNLVDLQRAAEQGRRGKMGTFPAGSVTTLRLDEALEWAAGALAKIQEIIEPAATRRNSVSLRAWAMCAALLEKAILQGQMAADPDRPLYPHEW-GLL 1368
            H+     V++  GK L+RDQVT+EYASRIR LV+    +K  R R PD+VCFTGG +  + ++ ASAGY+FFR + E  GVD+ +   L+E ES  ++EA+  VV EVS                        AAV  R  + P Q  H+TLIS   H+ R+  VHE S   S+L  +++   S+       P+    D +  F A +   +EELVP++VN Q  A   +F + EN +       SL  + A +GD I+  H+      R+ N        E   R  +     G  T L ++E LE AA +L++++++++PA   ++ +    +A  A +L + I + ++  DPDRPL  +E  GL+
Sbjct:  217 HDSSDFHVVLCFGKRLVRDQVTLEYASRIRTLVRYLRRLKESRQRGPDIVCFTGGYMGASCISSASAGYMFFRQMAECAGVDISHGHVLLEEESHVSREALDLVVAEVSE-----------------------AAV--RAGQLPGQTVHYTLISTTQHVRRIEYVHEHSHPSSMLRSIEEAGGSFSLLKASNPFLSSPDESLSFLAHLMLVVEELVPIRVNFQGAAAGVDFIRRENLSKLVTAKQSLNELIADLGDPIKLPHAQ-----RYHNPTSKNPLFESAARKLL----LGDGTALNVEEELESAAASLSRVKDMVQPAKNFQSHMV--DFAAAADVLGEVIDRLRLVFDPDRPLQLNEMMGLM 548          
BLAST of mRNA_F-serratus_M_contig1380.2762.1 vs. uniprot
Match: A0A6H5JFC6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFC6_9PHAE)

HSP 1 Score: 152 bits (385), Expect = 2.320e-37
Identity = 89/164 (54.27%), Postives = 112/164 (68.29%), Query Frame = 1
Query:  124 EDDLPSALTLLANVEALLGEDDDDNDDAAVRLPHYEEIDSVPENEELTLL----------REMSEQNLLHNRDLRQVMVVIGKHLIRDQVTVEYASRIRRLVQGMKSGRLRPDLVCFTGGRVWDNKVADASAGYVFFRHLCEQ---QGVDLYNTGFLVESESSC 576
            ED LP A+ ++  ++ LL  D     +A  RLP+ E   + P+ E + L+          R+MSE + L N +LRQV+VVIGKHLIRDQVTVEYASRIRRLVQG+KSGRL+PDLVCFTGG V DN+VADASAGY+FFRHLCEQ   +GV   +  +   +  SC
Sbjct:  312 EDQLPDAIEVIDRLDELLALDPPSESNA--RLPYPE---AEPDEETVRLMQARGMMMGLERQMSEDDQLLNPELRQVLVVIGKHLIRDQVTVEYASRIRRLVQGLKSGRLQPDLVCFTGGTVRDNRVADASAGYIFFRHLCEQHEARGVTFIDQLWTENTTESC 470          
BLAST of mRNA_F-serratus_M_contig1380.2762.1 vs. uniprot
Match: A0A7R9U259_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U259_9STRA)

HSP 1 Score: 151 bits (382), Expect = 9.270e-37
Identity = 112/363 (30.85%), Postives = 184/363 (50.69%), Query Frame = 1
Query:  322 VMVVIGKHLIRDQVTVEYASRIRRLVQGMK----SGRLRPDLVCFTGGRVWDNKVADASAGYVFFRHLCEQQGVDLYNTGFLVESESSCTKEAMMNVVREVSRLEREELQQDMDKEQEEEMQQKEAAAVGERVRKKPRQKYHFTLISHEYHLSRVIMVHEISETVSLLSPLKQLDASWGYEHVPYPYACYDDANKKFQADVYKTLEELVPLQVNVQAVARREEFFQEENYASLTHVRARVGDFIRQVHSSSGPLARHMNLVDLQRAAEQGRRGKMGTFPA-----GSVTTLRLDEALEWAAGALAKIQEIIEPAATRRNSVSLRAWAMCAA-LLEKAILQGQMAADPDRPLYPHEW-GLLEDE 1377
            V+V  GK L+RDQVT+EYASRIR +V+ +K    +G   PD++CFTGG + D+ ++ A+AGY+FFR + E  GVD+ ++  L+E ES  +++A+  +V E++                      EAAA G  +   P +  H+TLIS  +HL R+  VH  S   S+L  ++    ++ +    YPY    D   +F A++   +EELVP+ VN++A     E+F  +N   LT     + + ++ ++  +            +R  E+  R    +  A          L L E LE A  ++ K++ +IE A   +    +R+    A  LL + +   +   DPDRPL  +E  GLL+++
Sbjct:  162 VLVCFGKRLVRDQVTLEYASRIRTMVKYLKRLHNTGHKLPDVICFTGGYMGDSAISSATAGYIFFRQMAEYAGVDITSSQLLLEEESEFSRDAIDLIVPEIA----------------------EAAAEGGVL---PGETLHYTLISTTHHLRRLAHVHVNSARSSMLKKIEDAGGTYTFLKSSYPYLASPDEGLRFLANIILVVEELVPVLVNLEAATTGSEWFNRDNLRILTEACHSLRELVQSLNDPT-------KQPHPERFRERSPRNPFYSSAARKKLLSGAYALLLGEELEDAVSSITKVKNLIESAVYGKEYSGMRSDLDTATRLLGQTVAAMRGVLDPDRPLQMNEMVGLLQEQ 492          
BLAST of mRNA_F-serratus_M_contig1380.2762.1 vs. uniprot
Match: B7GC13_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7GC13_PHATC)

HSP 1 Score: 147 bits (372), Expect = 3.810e-35
Identity = 117/359 (32.59%), Postives = 176/359 (49.03%), Query Frame = 1
Query:  316 RQVMVVIGKHLIRDQVTVEYASRIRRLVQGMKSGRLRPDLVCFTGGRVWDNKVADASAGYVFFRHLCEQQGVDLYNTGFLVESESSCTKEAMMNVVREVSRLEREELQQDMDKEQEEEMQQKEAAAVGERVRKKPRQKYHFTLISHEYHLSRVIMVHEISETVSLLSPLK-----QLDASWGYEHVPYPYACYDDANKKFQADVYKTLEELVPLQVNVQAVARREEFFQEENYASLTHVR-ARVGDFIRQVHSSSGPLARHMNLVDLQRAAEQGRRGKMGTFPAGSVTTLRLDEALEWAAGALAKIQEIIEPAATRRNSVSLRAWAMCAALLEKAILQGQMAADPDRPLYPHEWGLLED 1374
            RQV +V+ K L +DQVTVEYA+RIRRL++ M      PD +CF GG    NK+ADA AGY++FR+LC  Q + L    F++E  +   + A  NVV E+ +      ++    E++E+ Q     +   ++R++ R   HF+++S EYHL ++  +H  S   S L  L       +D +W Y++         +  + F A  YKT + LVP   N++ V    EFFQ +NY  L   R + V D  +  H       R  +L D+ +       GK             +D  LE A   L +  +++ PA      VS   W++    LE+A+ Q   A DPD PL   +WG L D
Sbjct:  194 RQVAIVLSKSLQKDQVTVEYANRIRRLLKAMLEEDYHPDAICFVGGTSTGNKIADADAGYIYFRYLCACQNISLDGIQFILEY-TRAEQGAFQNVVDELQQKCLPLWRKAAFNEEDEDYQ-----SFSTKIRRRLR--VHFSIVSSEYHLCQLNDIHVRSPGQSPLRALGGWMRVSVDTTWAYQYSTTMLPRQKNPARSFCAKHYKTAQRLVPALHNLRGVVDNREFFQRDNYRVLVSARRSLVTDMEKLYH-------RQPSLKDVHKLCSDD--GKP------------MDVILESALLNLGRCLDLVRPAGLLTGIVSSTDWSLALTFLEQAVQQICKACDPDEPLDYSDWGSLGD 523          
BLAST of mRNA_F-serratus_M_contig1380.2762.1 vs. uniprot
Match: B8C0Y5_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C0Y5_THAPS)

HSP 1 Score: 143 bits (360), Expect = 6.020e-33
Identity = 125/417 (29.98%), Postives = 185/417 (44.36%), Query Frame = 1
Query:  304 NRDLRQVMVVIGKHLIRDQVTVEYASRIRRLVQGMKSG-RLRPDLVCFTGGRVWDNKVADASAGYVFFRHLCEQQGV--DLYNTGFLVESESSCTKEAMMNVVREVSR------LEREELQQDMDKEQEEEMQQKEAAAVGERVRKKPRQKYHFTLISHEYHLSRVIMVHEISETVSLLSPLKQL--------------------------------------------------DASWGYEHVPYPYACYDDANKKFQADVYKTLEELVPLQVNVQAVARREEFFQEENYASLTHVRARVGDFIRQVHSSSGPLARHMNLVDLQRAAEQGRRGKMGTFPAGSVTTLRLDEALEWAAGALAKIQEIIEPAATRRNSVSLRAWAMCAALLEKAILQGQMAADPDRPLYPHEWGLLEDE 1377
            N     V +V GK LIRDQVTVEYA+R+R L + +K     RP L+CFTGG    N V+DA+AGY++FRHLC  QG+  D   T   ++++S   +EAM  +  E+ R      L    L + +++             VG  + ++ +   HFTL+S EYHL  +  VH  S   S L PL  L                                                  D SW +++  YP+    D +  F    Y   EEL PL VN++ V  + EFFQ +NY  L+ +R  +   +  +++  G   R   +   +    QGR      F    V   ++  ALE A   L +  ++++PA    +SV    W+     LEK++    +  DPD+PL   EWG L D+
Sbjct:  302 NSTTYHVAIVFGKPLIRDQVTVEYATRLRTLAKLLKEEPNFRPKLICFTGGVSEGNVVSDATAGYLYFRHLCVCQGIVIDELQTRMWIDTKSKNEREAMERIASELWRNHIKLWLGERPLTERLNQHY----------GVGWTILER-KVDIHFTLVSTEYHLCNLNDVHHRSPVKSFLQPLVSLRGLVGSDRWVNSHELEAMDPSYSSSVHVRGSNTSPVVPERSTFGGIENSVDTSWSFQYGTYPFLHGKDESIVFLGQCYLLGEELTPLLVNMKGVVEQTEFFQRDNYLLLSSIRRSLVSLVEALYTEKGQSIRAGVIKYFE---SQGRN----RFTKEDV---KIIVALESALLNLGRCIDLVKPAGLLVSSVPAPTWSRALDALEKSMHHIHLVCDPDQPLDSLEWGKLFDD 697          
BLAST of mRNA_F-serratus_M_contig1380.2762.1 vs. uniprot
Match: K0TG42_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0TG42_THAOC)

HSP 1 Score: 143 bits (360), Expect = 6.040e-33
Identity = 121/417 (29.02%), Postives = 187/417 (44.84%), Query Frame = 1
Query:  301 HNRDLRQVMVVIGKHLIRDQVTVEYASRIRRLVQGMKSGRLRPDLVCFTGGRVWDNKVADASAGYVFFRHLCEQQGVDLYN--TGFLVESESSCTKEAMMNVVREVSRLEREELQQDMDKEQEEEMQQKEAAAVGERVRKKPRQKYHFTLISHEYHLSRVIMVHEISETVSLLSPLKQL----------------------------------------------------DASWGYEHVPYPYACYDDANKKFQADVYKTLEELVPLQVNVQAVARREEFFQEENYASLTHVRARVGDFIRQVHSSSGPLARHMNLVDLQRAAEQGR-RGKMGTFPAGSVTTLRLDEALEWAAGALAKIQEIIEPAATRRNSVSLRAWAMCAALLEKAILQGQMAADPDRPLYPHEWGLLEDENPQ 1386
            HN     + +V GK LI DQV+VEYA R+R L + +     +P L+CFTGG    N V+DASAG+V+F HLC  QG+ L +  T F ++++S   + AM  +  E+ R       +   KE+    +  +    G ++ ++ R   HFTL+S +YHL  +  +H  S   S L PL  L                                                    D SW +++  YP+   +D    F    Y   EEL PL VN++ V  + EFFQ +NY  L+ +R  +   +  +++  G   R      + R  EQG  R ++ T        +++   LE A   L +  ++++PA    ++V    W+     LEK++ Q +   DPDRPL   EWG L D+  Q
Sbjct:  297 HNSTTYHIAIVFGKALICDQVSVEYAGRLRTLAKMLHDDDFQPSLICFTGGISEGNSVSDASAGFVYFNHLCSAQGIRLNDMKTRFWIDTKSFNERVAMERLASELWRN----YIKGWLKERPLTERHNQRTFGGWKILER-RADIHFTLVSTDYHLCSLNDIHHRSPIKSFLQPLVSLRGLVGSDRFVTDQQELESLDPSYISSVHVSGTAEDAPSPTDRKSFGGIENCVDTSWSFQYSTYPFLHIEDDAVVFLGQCYLLGEELNPLLVNMKGVVEQTEFFQRDNYLLLSSIRRSLVALVEALYTDKGQEIR----AGVIRYFEQGHGRNRLVTRE-----DVKIIVVLEAALLNLGRCIDLVKPAGLLTSTVPAATWSRALDALEKSMDQIKAVCDPDRPLGALEWGKLTDDEDQ 699          
BLAST of mRNA_F-serratus_M_contig1380.2762.1 vs. uniprot
Match: A0A7S3V5C3_9STRA (Hypothetical protein n=2 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3V5C3_9STRA)

HSP 1 Score: 141 bits (355), Expect = 2.640e-32
Identity = 119/419 (28.40%), Postives = 178/419 (42.48%), Query Frame = 1
Query:  322 VMVVIGKHLIRDQVTVEYASRIRRLVQGMKSG-RLRPDLVCFTGGRVWDNKVADASAGYVFFRHLCEQQGVDLYNTGFLVESESSCTKEAMMNVVREVSRLEREELQQDMDKEQEEEMQQKEAAAVGERVRKKPR-----QK---YHFTLISHEYHLSRVIMVHEISETVSLLSPLKQL--------------------------------------DA-----------------------SWGYEHVPYPYACYDDANKKFQADVYKTLEELVPLQVNVQAVARREEFFQEENYASLTHVRARVGDFIRQVHSSSGPLARHMNLVDLQRAAEQGRRGKMGTFPAGSVTTLRLDEALEWAAGALAKIQEIIEPAATRRNSVSLRAWAMCAALLEKAILQGQMAADPDRPLYPHEWGLL 1368
            V +V GK L+RDQVTVEYASRIR L +  K+     P LVCF GG    + VA++ AGY+FFRH+CE QG+DL      ++++S    EA+ +V  E+                        +  + + + + P      QK    HFTLIS EYHL  +  VH  S   SLL+ ++ +                                      DA                       SW +++  YPY      +  F    +   EEL+PL VN++ V  + EFFQ +NY  L  +R  + + I  +H  S    + M   +L+R  +     +           +R+   LE A  +L +  ++++PA     SV+   W      LE ++ + +   DPDRPL P EWG L
Sbjct:  310 VAIVFGKELVRDQVTVEYASRIRTLARLFKNEPEFHPSLVCFCGGIADGSHVANSDAGYIFFRHMCEAQGIDLNGVEICIDNKSRSDDEAINSVTEEIK-----------------------STYIPKWLSRSPTTTDTMQKSIDMHFTLISTEYHLCNINDVHHRSPERSLLNAMENIGDSFTGNRNYSVQQKANAGRSSNDFFIYYDDDENGSFGDANISSGEQGVLKSNHPAVRGLVKTSWSFQYATYPYIYAKSDSTVFLGKCFLLGEELMPLLVNMKGVVEQREFFQRDNYLMLASIRRSLVEHIEALHKPSHSTKKAMK-NELRRIKDVHGNER---------DVIRI---LEGALLSLGRCCDMVKPAGLHVGSVTKDDWKRALRSLEHSMSEIRTYCDPDRPLLPSEWGKL 692          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1380.2762.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FW21_ECTSI2.550e-15362.05Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JCZ4_9PHAE9.060e-11061.93Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S1TFF2_9RHOD8.760e-4232.41Hypothetical protein n=1 Tax=Compsopogon caeruleus... [more]
A0A7S1TXW1_9STRA2.260e-3733.70Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A6H5JFC6_9PHAE2.320e-3754.27Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7R9U259_9STRA9.270e-3730.85Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
B7GC13_PHATC3.810e-3532.59Predicted protein n=2 Tax=Phaeodactylum tricornutu... [more]
B8C0Y5_THAPS6.020e-3329.98Uncharacterized protein n=1 Tax=Thalassiosira pseu... [more]
K0TG42_THAOC6.040e-3329.02Uncharacterized protein n=1 Tax=Thalassiosira ocea... [more]
A0A7S3V5C3_9STRA2.640e-3228.40Hypothetical protein n=2 Tax=Chaetoceros debilis T... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1380contigF-serratus_M_contig1380:129333..137180 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score474.2
Seed ortholog evalue7.5e-131
Seed eggNOG ortholog2880.D7FW21
Hectar predicted targeting categoryother localisation
EggNOG OGs2CY8W@1,2S2UA@2759
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons10
Model size1468
Cds size1467
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1380.2762.1prot_F-serratus_M_contig1380.2762.1Fucus serratus malepolypeptideF-serratus_M_contig1380 129333..137180 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929359.745763-CDS-F-serratus_M_contig1380:129332..1294791622929359.745763-CDS-F-serratus_M_contig1380:129332..129479Fucus serratus maleCDSF-serratus_M_contig1380 129333..129479 -
1690962815.3897514-CDS-F-serratus_M_contig1380:129332..1294791690962815.3897514-CDS-F-serratus_M_contig1380:129332..129479Fucus serratus maleCDSF-serratus_M_contig1380 129333..129479 -
1622929359.7639303-CDS-F-serratus_M_contig1380:129937..1300391622929359.7639303-CDS-F-serratus_M_contig1380:129937..130039Fucus serratus maleCDSF-serratus_M_contig1380 129938..130039 -
1690962815.4009514-CDS-F-serratus_M_contig1380:129937..1300391690962815.4009514-CDS-F-serratus_M_contig1380:129937..130039Fucus serratus maleCDSF-serratus_M_contig1380 129938..130039 -
1622929359.7808816-CDS-F-serratus_M_contig1380:130678..1308351622929359.7808816-CDS-F-serratus_M_contig1380:130678..130835Fucus serratus maleCDSF-serratus_M_contig1380 130679..130835 -
1690962815.4186692-CDS-F-serratus_M_contig1380:130678..1308351690962815.4186692-CDS-F-serratus_M_contig1380:130678..130835Fucus serratus maleCDSF-serratus_M_contig1380 130679..130835 -
1622929359.8019428-CDS-F-serratus_M_contig1380:133192..1332781622929359.8019428-CDS-F-serratus_M_contig1380:133192..133278Fucus serratus maleCDSF-serratus_M_contig1380 133193..133278 -
1690962815.4306133-CDS-F-serratus_M_contig1380:133192..1332781690962815.4306133-CDS-F-serratus_M_contig1380:133192..133278Fucus serratus maleCDSF-serratus_M_contig1380 133193..133278 -
1622929359.8169787-CDS-F-serratus_M_contig1380:133407..1334791622929359.8169787-CDS-F-serratus_M_contig1380:133407..133479Fucus serratus maleCDSF-serratus_M_contig1380 133408..133479 -
1690962815.4399536-CDS-F-serratus_M_contig1380:133407..1334791690962815.4399536-CDS-F-serratus_M_contig1380:133407..133479Fucus serratus maleCDSF-serratus_M_contig1380 133408..133479 -
1622929359.8291647-CDS-F-serratus_M_contig1380:134691..1348451622929359.8291647-CDS-F-serratus_M_contig1380:134691..134845Fucus serratus maleCDSF-serratus_M_contig1380 134692..134845 -
1690962815.4499285-CDS-F-serratus_M_contig1380:134691..1348451690962815.4499285-CDS-F-serratus_M_contig1380:134691..134845Fucus serratus maleCDSF-serratus_M_contig1380 134692..134845 -
1622929359.8440063-CDS-F-serratus_M_contig1380:135159..1353801622929359.8440063-CDS-F-serratus_M_contig1380:135159..135380Fucus serratus maleCDSF-serratus_M_contig1380 135160..135380 -
1690962815.4594057-CDS-F-serratus_M_contig1380:135159..1353801690962815.4594057-CDS-F-serratus_M_contig1380:135159..135380Fucus serratus maleCDSF-serratus_M_contig1380 135160..135380 -
1622929359.8637626-CDS-F-serratus_M_contig1380:135586..1357541622929359.8637626-CDS-F-serratus_M_contig1380:135586..135754Fucus serratus maleCDSF-serratus_M_contig1380 135587..135754 -
1690962815.4702446-CDS-F-serratus_M_contig1380:135586..1357541690962815.4702446-CDS-F-serratus_M_contig1380:135586..135754Fucus serratus maleCDSF-serratus_M_contig1380 135587..135754 -
1622929359.8783164-CDS-F-serratus_M_contig1380:136225..1363061622929359.8783164-CDS-F-serratus_M_contig1380:136225..136306Fucus serratus maleCDSF-serratus_M_contig1380 136226..136306 -
1690962815.480396-CDS-F-serratus_M_contig1380:136225..1363061690962815.480396-CDS-F-serratus_M_contig1380:136225..136306Fucus serratus maleCDSF-serratus_M_contig1380 136226..136306 -
1622929359.8927152-CDS-F-serratus_M_contig1380:136901..1371801622929359.8927152-CDS-F-serratus_M_contig1380:136901..137180Fucus serratus maleCDSF-serratus_M_contig1380 136902..137180 -
1690962815.4905705-CDS-F-serratus_M_contig1380:136901..1371801690962815.4905705-CDS-F-serratus_M_contig1380:136901..137180Fucus serratus maleCDSF-serratus_M_contig1380 136902..137180 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig1380.2762.1

>prot_F-serratus_M_contig1380.2762.1 ID=prot_F-serratus_M_contig1380.2762.1|Name=mRNA_F-serratus_M_contig1380.2762.1|organism=Fucus serratus male|type=polypeptide|length=489bp
VDDSNYGEEARAEVEGSDNTTPKLEAGTVGGGEEGEMGALVEDDLPSALT
LLANVEALLGEDDDDNDDAAVRLPHYEEIDSVPENEELTLLREMSEQNLL
HNRDLRQVMVVIGKHLIRDQVTVEYASRIRRLVQGMKSGRLRPDLVCFTG
GRVWDNKVADASAGYVFFRHLCEQQGVDLYNTGFLVESESSCTKEAMMNV
VREVSRLEREELQQDMDKEQEEEMQQKEAAAVGERVRKKPRQKYHFTLIS
HEYHLSRVIMVHEISETVSLLSPLKQLDASWGYEHVPYPYACYDDANKKF
QADVYKTLEELVPLQVNVQAVARREEFFQEENYASLTHVRARVGDFIRQV
HSSSGPLARHMNLVDLQRAAEQGRRGKMGTFPAGSVTTLRLDEALEWAAG
ALAKIQEIIEPAATRRNSVSLRAWAMCAALLEKAILQGQMAADPDRPLYP
HEWGLLEDENPQEDAQGDSKVTSRRARETLYAVLEEEGS
back to top

mRNA from alignment at F-serratus_M_contig1380:129333..137180-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig1380.2762.1 ID=mRNA_F-serratus_M_contig1380.2762.1|Name=mRNA_F-serratus_M_contig1380.2762.1|organism=Fucus serratus male|type=mRNA|length=7848bp|location=Sequence derived from alignment at F-serratus_M_contig1380:129333..137180- (Fucus serratus male)
GTGGATGATTCAAATTACGGCGAAGAAGCACGCGCCGAGGTGGAAGGGAG CGACAATACCACCCCGAAGCTTGAGGCGGGGACAGTGGGGGGAGGTGAGG AGGGTGAGATGGGTGCGCTCGTGGAGGATGACCTCCCGTCGGCGCTGACG CTTCTGGCGAACGTTGAGGCCTTGCTCGGAGAGGATGACGACGATAATGA TGACGCTGCCGTAAGACTGCCTCATTACGAGGAGATAGACAGCGTGCCCG AGAACGAGGAGCTTACACTTTTGAGGGAGGTCAGTACGTTTCCACTTTGA CTCTGTAAGTAAAGTGTTCGCGTGCTACTCAAAATATCAAATTCAGTGGT TCAAACCTCGGCGAGTCGGTCCCATCTGCTGGTCGTTATATATATTTGTA ATATGGGGGGGCGAGAACCAGACTGAGGTTATATTGAGGAACAACTGCCT GTTACGACTCCTAAAATCGGCTGCCGGTAACAGGAACGCTCAATACAGAG ATGGTATACTTGTACATGGGGCGAAGGCCGGTGATTTAATCGACCCCCTT CCCCCCACGATACCGATTTACTATTGTAGCCCGCTACCACTCCTCCCTTA GAAGCACTGCTTACTTTATATTGAACGTTAAACTTGGTTTCTGTGTGAAC TATTGATAAGTTCACAGAGCAAGTTCACAGAACAAGTTGCATTCATTGTC CATAGATTTCTTCAGCCTTCCGAAAGTTCGAGTGGCGCACATCTTTGCTC ACGATCCTCTCCTTAAGCTTTCAGAAAGAGAGCGTATATTGCACGACACA CAACGCCCAAGCAACTGCCCCTCGGCCTTGGTCGCGCTCCGGCACAAACC TCCTGCCTCCGGAAATACCTACAGATGTCCGAGCAAAACCTTCTTCACAA TCGAGACCTGCGGCAAGTCATGGTGGTGATCGGCAAGCATTTGATCAGGG ATCAGGTGCGCGCGTTTTGTGGGAGCGCAACGCTCTCCGCGGGTGCACTA GCGTCCATGGAATCTGATAGTTTTTCCTCAAGCACGACCACAAAAACGTG ACGCGTGGCGAGACGCCATACCAGATGGCGATTTCGGGCGTGGCATGGCC GCCGCGCAATGGGAGGTCGGCCACGTGATTGATCCAAACTGTAGAAGGAA ACATAGTCGTCCAGACACATGCGTTACCACCACAGCAGTGTCTCCGAAGA GATTCCACACGAGTATTTTCTGCACTGCATGTGGTTAGGCTTGGTGAAAA ACGTTTCCCGGGCGCCGATGGCCGTACATCATGCAGCGTCTGGCGATGAT TCGACCGCCGCAACGCAGATGGACTTCCAACGCACTGTCGAACGGCGGCC CTCTCTTCGCCTGCCCATGTATAACTTTCACCCTCACCCCGGTCCCGCCT CCTTCGGTGTGAGCCGAGCCCAACAGGTGACGGTGGAGTACGCCTCTCGC ATCAGGCGCCTGGTGCAGGGGATGAAGTCCGGTCGCTTGAGGCCCGACCT GGTATGCTTCACGGGAGGGCGAGTGTGGGACAACAAGGTGGCGGACGCCT CAGCCGGGTATGTCTTCTTCAGGCACCTGTGCGAGCAGCAAGGGGTGAGC GTTCGAGCCAGTGCGCGAGATGCCAGTCTGTTCCGACGTGGAAGTTTGCA CACGGGTTGGATTGGGTTGGACCGGATTCACGCACCCACACATACACATT TGTACACTCATGCAAACACAAAATTGCGTCTCCACGCATGTTGTGCGTCG CGCACCCTTAGTCTTACCTCTCTACTGCCCCTTACCTCTCTGTGAAACAG GTGGACCTGTACAACACCGGATTCTTGGTAGAGAGCGAGTCGTCGTGCAC GAAGGAAGCAATGATGAACGTGGTGAGGGAAGTGTCGAGGCTGGAGAGAG AGGAGTTACAGCAGGACATGGACAAAGAGCAGGAGGAAGAGATGCAACAG AAAGAGGCCGCGGCGGTGGGAGAAAGGGTGCGGAAGAAGCCCCGACAGAA ATATCACTTCACTCTCATCAGGTAATGAAGGCAGGTACGTCTAGGCACAG GGCGTCATGGTCCCGATTACGCGCGCTCTCGTCGACGGCGCTCCTTGCTG GCGAAGATTGTACCGCGTAATTTGCCAGCTTGTGTGTTGGTCCCAAACTC CCCCTCGCCTCCGCGTTCGTAAGAAAGCAAGCTCTGCCTATCCTTCCTCT CGACGCCTCGCGGAGGAAATCTCATCTAATGTTATCAATACACGTATCCC CTCGTTTTGTCAGCGTGGTCGCATCCCGTGTGTGTTCGCCCTTTATCTCG CCTTTTTTGTTTGCATCTCGCCACCGACCTCGCAGCCACGAGTATCACTT GTCTCGAGTGATCATGGTCCACGAAATCAGCGAGACCGTGAGCCTGCTCT CCCCGCTTAAGCAGCTGGACGCCTCGTGGGGCTACGAGCACGTTCCTTAT CCGTACGCGTGCTACGACGACGCGAACAAAAAGTTTCAGGCGAGGGCATG ATAGGAGGATTGGAAAGGTCGAGATAGAAGGAAAGCGTCCCCGCGGTTTC CTCGGTCCATCCGCGCGAGAATGAACCGCGAGCAGCCGAATCCCTCTCCC CCTCTTTCCAAACTAGATATGTATATGTAAATATATAGAGCTATGCGTGT AGTATTTTTTATTTCCCAACCTATGCCCGACAGCTTTCACCTGAGGTTAT TATATCAAAGATACCTAATTACAGGCGCGGGTTTGTCGCGATCGGTCCCA TTGGCGACGAGCTCAAAGCGGGCTTGATCGTCTATGACTATTAATAACAA GCGCTGATTAGCCCTGTTGACCATTTTCTGCCATTTTTTTTCCTCTTTTT GCTGGGCAGGAGGGGGGAGGGGTTGTTGTTTTACACCGCAGTAAGTAATC GAGTTCGTAGGGTGTTGGGAGGCAAGTACCGTTTGACTCCTCCATTGCTT GATTGCTTGATTGCTTCATTCAGGCTGGGGAGGGGGGGGAGGGCCTTGTG GCAATTTCCGGCTCCGTGCACTCCGCCATGACAACAAAAAACATTTTAAA ACCCCAAAATTCGAAGCGCGACATTGGCCATTCGCCATTCGCTGATCCAG GCCCCCGCGCTTGATGTTTTGATATTTTGCGTTGTGCTGTTTTACATACA GCCCGTTAGTCTGACGTTGCACTCCAAGTCGGCACGTTTTTTTTCGTCCA TCACATGAACAGTGCATTTCGGTGGTTCATTAGATAAGGATGGTTGGCGC TATCGATGATACATTATCGATGAACACCTAATACAGCGATACAAGTACGT GGTAGAATTACCGTGTCTCATCTCTTGGCCCCCTGCGACACATCCACGTT GTAACTATTAATATATACATGGGACCTATCCACGTGCTGCTGCTAGCGAC GTGCTAGGGCGTTGCCCGCATTTCACGATGCGCCCCGTGTACTTGCTTTA GTATTACTACTACTATTACTATTACTAAAACTAGAGCTACTCTGTCTGTG TACTTCGGTTTGTTAGCCATCTGACGCGTGGTGACCCCGGCACAGAAATG CTAGCAAAGCCTCGTATAATCTCTTCATGTGTCTCATGCCAAATTCACGG CCTCCTGCTATTGATTTGAAAACAAACAGTAACAATTAAGTAAGTTACTG CTGTCCATTTATCGATCTGTCTATTTTTCGCGGTGGTGTGATTGATGGCA GGCTGACGTTTACAAGACCCTGGAGGAGCTGGTGCCGCTTCAGGTTAATG TCCAGGCGGTCGCCCGTCGAGAGGTGACCACCTGATCTACCATATTTCTC TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC CTAGTGTATTTCACTTTCGACCATCCACCATTCACTGCGTTTGTATCCGC AGGAGTTTTTTCAAGAGGAGAACTACGCCTCGCTGACGCACGTCCGAGCG CGGGTGGGCGACTTCATCCGACAGGTCCACTCGTCGAGGTGCGTTGCCGT ATCTACAGCACAGTATACAAAACAATACAAATCAATGTAATACAATACAA TACACTTAGTATGTTGTTTACAGTATATCACATTATCTGATCCGCTACGA ATCCAGCCGTGGTCACAAAATACCCGGAGCCAAACCAAAAAAACAAATCA AACCAAAAAACGCGGTCGGAGAAAAAAAACAGGGAAAAAATACAAAAAAA ACGACGAAAAAAAGTAACCAGCAGAGAAACTCATCGCCGGGATGGGACGA CGGAAGAGACAGACAAATACACACAAAAACACAAAGCAACAGCAAAAGAA ACAAATAAAAGACAATCACATAGGCGTAGGGCAAGGAAAACATCCTCCTC CGTAAACGACGCTAGAAAAGCAAACACAATATTATATTAAGCAGCGGGAG ACAACCCAGATAAGAAGACAAAAAAACAAGGACACAACGAATGCGACACA CAGCAGAAGAAAACATACCAGTAGAAGGAGGGAAAAGGGGACATCAGTCA AATGAAATAAATAATGAGGTACCAGTATTGTATACAGACACAAGCAGAAG CATCGCGAGGAGTTAGCTGCCCAGAAATAAAATACAAATAAAATAGGAGC AGGATCCATGCCCGGACCCACCTATATCGCAGGAAGAAAATAAACAAATA AAAGCTACTAGGTACATGAAATAAATCAAGACAGATGGGCACACGTTGCT ACTGCAGTTGTACATCGATTTGCCTTAGCCTCTAATCAGGAATAAAGCGA CTTACTACTTCGCGTCCCGAGCAGTTATCGTCACGCTTTCTGTGTATTAA TATTACTATATTAATACTCCAGTATATCAATACTAATAGGTGGATGTTCT ACTGGCGGCCCTTGATCCTCGAGCCTCGTGCTGGCGCCGCATGTTACATT GGCGGAGATCCGCGCGTCGCCAGGCGTTCTCCTGTGCTTCCGCTCCCTTT TCGACCCCCCGGTGCCACATACCCACGTTCTTCGCAGCAGTCATCGAATC CCGTCCAACCTTGACAATAACTCCAAATGCGACCTATTTCCGTCCTTTGC CTTTGCGCGGGATCGCCACGATGGCCTCGAGACTTTTCTGGAGGCAGTCC CCCCAAGACGTCGCCGGTTGACCTCCTCGCTTGGGCCCTTGTACCGCCAG CCGCCCAAACATGATGCGCTTTGAGAGCCTTGAGTCGCCTTGCCGAACAA GGGCCCCGTCGAACCCAAGTTGACGCTGCATATACGAATAGCCAGCACTC TCAGCAGAGTTTGGATTAGCCAGGTATGGTTGCCAATCCTGCTCGTGGTC AGCCTGAACAGGGAAAATGAATAGTTCCCTTTCCCCGTACGCACCTGAGA ATTTGATCTCGTGAGACGGGTTCGGCCGTCCCGTCCGGCGTCAGCCCGCT CATTCTTCACACTCAGGCTGAATCTGCTGCTTGCTCACGGGGACTCCTCC CGCTTTCCGCTGCGGCGTTGATTGGTCCATTCATTTATATCGCCAATCAC CATCCGGTTAATCCCGAGTTTTACCAAGTCACGCAATTGCGTACCGGTGA CGTTCACGGCCGCGAGTTCGCCGGCGCAGGCCCAGTAGTCATAGTCTTCA AGGTAGCTCCAGTACTGTAATGGGTGCTGCCTTTTCAGGTGTATCACCAT ACCTATAGACCAATTAGTGTGCGCCTCTCTTTTCCCATACCCTCGATTGG TACTTGTACAATGAACATGTCCGATACTGTACAGAAAGTATCGTAGTAGG AGACCGTCCGTCGCCTGTGCAGCTCTATGATACCCACGGTACAAGACACA CCGACACAAGTGTCGAGACCAAGGCTGCTGAGCCACGTTACAAGCGTTGT ACCGCTGTACCGGCGACACGCGGTAAGCCATGGTAACATGTACCCTGATA CTTGCAGTCCTTTCTGTGGCAGCTTCTGTGCGCAATCAGGGCACATCCCC CCCCCCCAACCATCTACCCGCACCTCGTGTTTTTATTTTTATTTTTGTTT TGTTTTTGTTTTTGTTTCAGTTTCTCTCCTCCTTTCTCTTCTCTGACCCC GTTGGGGTGCCACGAAATTAAAATATACTTGACTCGGTATTTGAATTTGC TGCATTTGACTTGTTCCACCACGGTCGCCCCACCGTCGTCCCTTGCTATA TTAATATTAATATATTAATATTTGTCGCCGTCGATCTCGCTGTCCCTTTT CCCAGTAGCTGTAAAAACAATAGCGCTGTTACATAACATTTCCTACTTTT GGTGTTGTTTGCATCGCTCTTTTTTGTTCTTACCTGTCGTGCAAGCTGAT CCGCCCGCCCCTCCCTGCGTGATCCTCCCCCTCCACCCCCACCAGTGGGC CTCTGGCGCGTCATATGAACCTCGTGGACCTACAGCGCGCGGCGGAACAG GGAAGGAGAGGAAAGATGGGCACCTTCCCGGCCGGCAGCGTGACCACCCT CCGCCTTGACGAGGCACTAGAGTGGGCCGCGGGCGCCCTCGCCAAGATTC AGGTGCCGCGATCGTTTGGTCCGAGCTATAATGATGCCAGCGGCGCCCGA CGCGACCGCCTCTCCAAGAAAAGGCGGTTTGTGAATTTAGTTCGTCACGG CGAAGTTCGACGCGATAACGTTTGGCGACGCCATTCGTGGTTAGATACCC TTTACATTACTTGGTTGTAGCATTAAACAGGTTCACCCGTGTCTCGGAAG GCCTTCGTGTCGAGCCGGCCGCGATCGTCTTTGCGACTCGAGATTCTGGC CGTAGGTCGACCTGCCGCGGAAAAAAGTGCATAAAACTAAGGCATTTCTG CCGGGTGTTAGCGAAGAATATTGTCCCGCATAGGATAGTGAAGCACTAGT CTATAGACTACAAGGTTGGCCCGCAAGTCGGCGTGGCGTAAAGAACGTCA AAAGAAAAGCGCCTCTCTGAGGCGGGCGGAAACAGGAAACAGTGTTGACG GCGTCGCACCGTGCTGTCGGCTGGACCGTGTCACGAGACGCCGCTCGTTC TTCTCCCGTACGAATGAAGCCGTGCAGCAAATCACCTAAATCGCCAAACG CAGTGGTGTGCGGTTTATGTTTGGACTTTTTCGGTTCAAACAGCCAACCG AAATAATTTTCCCTATCCTGCCTCGGCCGTGTGCACGGCAGGAGATCATT GAGCCGGCGGCTACGCGAAGGAACAGCGTGTCGCTAAGAGCGTGGGCGAT GTGCGCGGCTCTGCTCGAGAAGGCTATCCTTCAGGGGCAGATGGTACGCG TGGTTTCATCAATATCCGCACGGCTATAAACCACGTCACCCTTTCGCCGA CTTCTCTGACGAACCACTCTGGGTTCTTTAGTGTGGCGCGGCCCATGCAG ATCGCAAAGGGTTCATATTCTGAAGATACCGTTCAAGAGATCGCAACAGC TCCTGTATTTATGATTTATTTAGGAGACGAAGCGAGAAACGGCATGATGC CCATGGCGATCTTGATGTTCTTGAAAGAGGCAGTCCAAAAACCGCCCCTG CGTCGCACCCGTACCCATACCTATCCGGGACATTACCTCGCCATGATCAT GTCGTGACCGTCTTGCGAGCACCTCTGGCGTACGAGATCATGATCTTCTC TTGGGTCCGTGCTTAACATCTCACGACGATGCCTGGCATTTTCCGTGCGC CTCTGCGTCCGCCCTCTCCCTCCTCATTTTTCTCCTGCTTCCCTGACAAA GGCTGCCGATCCCGATCGCCCGCTTTACCCCCATGAGTGGGGCTTGCTAG AGGACGAGAATCCCCAGGAAGACGCGCAAGGTGACAGCAAGGTGACTTCC AGGCGCGCGCGAGAGACGCTGTACGCCGTGCTGGAAGAGGAAGGGTCG
back to top

Coding sequence (CDS) from alignment at F-serratus_M_contig1380:129333..137180-

>mRNA_F-serratus_M_contig1380.2762.1 ID=mRNA_F-serratus_M_contig1380.2762.1|Name=mRNA_F-serratus_M_contig1380.2762.1|organism=Fucus serratus male|type=CDS|length=2934bp|location=Sequence derived from alignment at F-serratus_M_contig1380:129333..137180- (Fucus serratus male)
GTGGATGATTCAAATTACGGCGAAGAAGCACGCGCCGAGGTGGAAGGGAG
CGACAATACCACCCCGAAGCTTGAGGCGGGGACAGTGGGGGGAGGTGAGG
AGGGTGAGATGGGTGCGCTCGTGGAGGATGACCTCCCGTCGGCGCTGACG
CTTCTGGCGAACGTTGAGGCCTTGCTCGGAGAGGATGACGACGATAATGA
TGACGCTGCCGTAAGACTGCCTCATTACGAGGAGATAGACAGCGTGCCCG
AGAACGAGGAGCTTACACTTTTGAGGGAGGTGGATGATTCAAATTACGGC
GAAGAAGCACGCGCCGAGGTGGAAGGGAGCGACAATACCACCCCGAAGCT
TGAGGCGGGGACAGTGGGGGGAGGTGAGGAGGGTGAGATGGGTGCGCTCG
TGGAGGATGACCTCCCGTCGGCGCTGACGCTTCTGGCGAACGTTGAGGCC
TTGCTCGGAGAGGATGACGACGATAATGATGACGCTGCCGTAAGACTGCC
TCATTACGAGGAGATAGACAGCGTGCCCGAGAACGAGGAGCTTACACTTT
TGAGGGAGATGTCCGAGCAAAACCTTCTTCACAATCGAGACCTGCGGCAA
GTCATGGTGGTGATCGGCAAGCATTTGATCAGGGATCAGATGTCCGAGCA
AAACCTTCTTCACAATCGAGACCTGCGGCAAGTCATGGTGGTGATCGGCA
AGCATTTGATCAGGGATCAGGTGACGGTGGAGTACGCCTCTCGCATCAGG
CGCCTGGTGCAGGGGATGAAGTCCGGTCGCTTGAGGCCCGACCTGGTATG
CTTCACGGGAGGGCGAGTGTGGGACAACAAGGTGGCGGACGCCTCAGCCG
GGTATGTCTTCTTCAGGCACCTGTGCGAGCAGCAAGGGGTGACGGTGGAG
TACGCCTCTCGCATCAGGCGCCTGGTGCAGGGGATGAAGTCCGGTCGCTT
GAGGCCCGACCTGGTATGCTTCACGGGAGGGCGAGTGTGGGACAACAAGG
TGGCGGACGCCTCAGCCGGGTATGTCTTCTTCAGGCACCTGTGCGAGCAG
CAAGGGGTGGACCTGTACAACACCGGATTCTTGGTAGAGAGCGAGTCGTC
GTGCACGAAGGAAGCAATGATGAACGTGGTGAGGGAAGTGTCGAGGCTGG
AGAGAGAGGAGTTACAGCAGGACATGGACAAAGAGCAGGAGGAAGAGATG
CAACAGAAAGAGGCCGCGGCGGTGGGAGAAAGGGTGCGGAAGAAGCCCCG
ACAGAAATATCACTTCACTCTCATCAGGTGGACCTGTACAACACCGGATT
CTTGGTAGAGAGCGAGTCGTCGTGCACGAAGGAAGCAATGATGAACGTGG
TGAGGGAAGTGTCGAGGCTGGAGAGAGAGGAGTTACAGCAGGACATGGAC
AAAGAGCAGGAGGAAGAGATGCAACAGAAAGAGGCCGCGGCGGTGGGAGA
AAGGGTGCGGAAGAAGCCCCGACAGAAATATCACTTCACTCTCATCAGCC
ACGAGTATCACTTGTCTCGAGTGATCATGGTCCACGAAATCAGCGAGACC
GTGAGCCTGCTCTCCCCGCTTAAGCAGCTGGACGCCTCGTGGGGCTACGA
GCACGTTCCTTATCCGTACGCGTGCTACGACGACGCGAACAAAAAGTTTC
AGCCACGAGTATCACTTGTCTCGAGTGATCATGGTCCACGAAATCAGCGA
GACCGTGAGCCTGCTCTCCCCGCTTAAGCAGCTGGACGCCTCGTGGGGCT
ACGAGCACGTTCCTTATCCGTACGCGTGCTACGACGACGCGAACAAAAAG
TTTCAGGCTGACGTTTACAAGACCCTGGAGGAGCTGGTGCCGCTTCAGGT
TAATGTCCAGGCGGTCGCCCGTCGAGAGGCTGACGTTTACAAGACCCTGG
AGGAGCTGGTGCCGCTTCAGGTTAATGTCCAGGCGGTCGCCCGTCGAGAG
GAGTTTTTTCAAGAGGAGAACTACGCCTCGCTGACGCACGTCCGAGCGCG
GGTGGGCGACTTCATCCGACAGGTCCACTCGTCGAGGAGTTTTTTCAAGA
GGAGAACTACGCCTCGCTGACGCACGTCCGAGCGCGGGTGGGCGACTTCA
TCCGACAGGTCCACTCGTCGAGTGGGCCTCTGGCGCGTCATATGAACCTC
GTGGACCTACAGCGCGCGGCGGAACAGGGAAGGAGAGGAAAGATGGGCAC
CTTCCCGGCCGGCAGCGTGACCACCCTCCGCCTTGACGAGGCACTAGAGT
GGGCCGCGGGCGCCCTCGCCAAGATTCAGTGGGCCTCTGGCGCGTCATAT
GAACCTCGTGGACCTACAGCGCGCGGCGGAACAGGGAAGGAGAGGAAAGA
TGGGCACCTTCCCGGCCGGCAGCGTGACCACCCTCCGCCTTGACGAGGCA
CTAGAGTGGGCCGCGGGCGCCCTCGCCAAGATTCAGGAGATCATTGAGCC
GGCGGCTACGCGAAGGAACAGCGTGTCGCTAAGAGCGTGGGCGATGTGCG
CGGCTCTGCTCGAGAAGGCTATCCTTCAGGGGCAGATGGAGATCATTGAG
CCGGCGGCTACGCGAAGGAACAGCGTGTCGCTAAGAGCGTGGGCGATGTG
CGCGGCTCTGCTCGAGAAGGCTATCCTTCAGGGGCAGATGGCTGCCGATC
CCGATCGCCCGCTTTACCCCCATGAGTGGGGCTTGCTAGAGGACGAGAAT
CCCCAGGAAGACGCGCAAGGTGACAGCAAGGTGACTTCCAGGCGCGCGCG
AGAGACGCTGTACGCCGTGCTGGAAGAGGAAGGGTCGGCTGCCGATCCCG
ATCGCCCGCTTTACCCCCATGAGTGGGGCTTGCTAGAGGACGAGAATCCC
CAGGAAGACGCGCAAGGTGACAGCAAGGTGACTTCCAGGCGCGCGCGAGA
GACGCTGTACGCCGTGCTGGAAGAGGAAGGGTCG
back to top