prot_F-serratus_M_contig138.2753.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig138.2753.1
Unique Nameprot_F-serratus_M_contig138.2753.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length118
Homology
BLAST of mRNA_F-serratus_M_contig138.2753.1 vs. uniprot
Match: A0A6H5LL52_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LL52_9PHAE)

HSP 1 Score: 97.8 bits (242), Expect = 1.180e-21
Identity = 53/121 (43.80%), Postives = 70/121 (57.85%), Query Frame = 0
Query:    2 KKTDEQLSVKGQRFFVDVGGPMNHSSLGGNSYVVIFVDDCTRFKVVKFVKKKSNTTAALLSLIADYITPQKLSIKC----VRADNGGELEGAFQRELDRRSITHEHTPPDTPQYNGVTERA 118
            K TD + + K  R F+++GG M   S+GGN Y +I  DDCTR+  V F+K KS+  AA    +ADY   +  ++ C     R D GGE +G F     R  I  E TPP+TP+YNGV ERA
Sbjct:  184 KSTDTRAANKLFRLFLNLGGRMQFKSIGGNWYTLIIRDDCTRWTRVFFLKHKSDAAAAFEQYLADY---RAETVPCEVFVARTDGGGEFQGQFAEVCRRSGIKQEFTPPNTPKYNGVAERA 301          
BLAST of mRNA_F-serratus_M_contig138.2753.1 vs. uniprot
Match: A0A6H5JM30_9PHAE (Integrase catalytic domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JM30_9PHAE)

HSP 1 Score: 89.4 bits (220), Expect = 2.410e-18
Identity = 49/118 (41.53%), Postives = 63/118 (53.39%), Query Frame = 0
Query:    2 KKTDEQLSVKGQRFFVDVGGPMNHSSLGGNSYVVIFVDDCTRFKVVKFVKKKSNTTAALLSLIADYITPQ-KLSIKCVRADNGGELEGAFQRELDRRSITHEHTPPDTPQYNGVTERA 118
            K T  +   K  R ++D+GG M   S+GGN Y +I  DD +R+  V F+K KS+    L   +ADY T      +   R D GGE +G F     R  I  E TPP TP+YNGV ERA
Sbjct:  635 KSTSTRAVKKLFRVYLDLGGKMKTRSIGGNWYTLIIRDDFSRWTRVFFLKHKSDAAVGLEKFLADYRTKGVPCEVYIARTDGGGEFQGQFAEVCRRHGIKQEFTPPHTPKYNGVAERA 752          
BLAST of mRNA_F-serratus_M_contig138.2753.1 vs. uniprot
Match: A0A6H5KAM7_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAM7_9PHAE)

HSP 1 Score: 88.6 bits (218), Expect = 4.280e-18
Identity = 49/118 (41.53%), Postives = 63/118 (53.39%), Query Frame = 0
Query:    2 KKTDEQLSVKGQRFFVDVGGPMNHSSLGGNSYVVIFVDDCTRFKVVKFVKKKSNTTAALLSLIADYITPQKLSIKCV-RADNGGELEGAFQRELDRRSITHEHTPPDTPQYNGVTERA 118
            K T  +   K  R ++D+GG M   S+GGN Y +I  DD +R+  V F+K KS+        +ADY T       C+ R D GGE +G F     R  I  E TPP TP+YNGV ERA
Sbjct:   11 KSTSTRAVKKLFRVYLDLGGKMKTRSIGGNWYTLIIRDDFSRWTRVFFLKHKSDAAVGFEKFLADYRTKGVPCEVCIARTDGGGEFQGQFAELCRRHGIKEEFTPPHTPKYNGVAERA 128          
BLAST of mRNA_F-serratus_M_contig138.2753.1 vs. uniprot
Match: A0A6H5KKB4_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKB4_9PHAE)

HSP 1 Score: 83.2 bits (204), Expect = 8.120e-17
Identity = 45/100 (45.00%), Postives = 57/100 (57.00%), Query Frame = 0
Query:   23 MNHSSLGGNSYVVIFVDDCTRFKVVKFVKKKSNTTAALLSLIADYITPQKLSIKC----VRADNGGELEGAFQRELDRRSITHEHTPPDTPQYNGVTERA 118
            M   S+GGN Y +I  DDCTR+  V F+K KS+  AA    +ADY   +  ++ C     R D GGE +G F     R  I  E TPP+TP+YNGV ERA
Sbjct:    1 MQFKSIGGNWYTLIIRDDCTRWTRVFFLKHKSDAAAAFEPYLADY---RAETVPCEVFVARTDGGGEFQGQFAEVCRRYGIKQEFTPPNTPKYNGVAERA 97          
BLAST of mRNA_F-serratus_M_contig138.2753.1 vs. uniprot
Match: A0A6H5JIN8_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIN8_9PHAE)

HSP 1 Score: 83.6 bits (205), Expect = 2.400e-16
Identity = 50/120 (41.67%), Postives = 63/120 (52.50%), Query Frame = 0
Query:    2 KKTDEQLSVKGQRFFVDVGGPMNHSSLGGNSYVVIFVDDCTRFKVVKFVKKKSNTTAALLSLIADYIT---PQKLSIKCVRADNGGELEGAFQRELDRRSITHEHTPPDTPQYNGVTERA 118
            K T  +   K  R ++D+GG M   S+GGN Y +I  DDC+R+  V F    S+        +ADY T   P K+ I   R D GGE +G F     R  I  E TPP TP+YNGV ERA
Sbjct:  389 KSTSTRAVKKLFRVYLDLGGKMKTRSIGGNWYTLIIRDDCSRWTCVFFFNH-SDAAVGFEKSLADYRTKGVPCKVYI--ARTDGGGEFQGQFAEVCRRHGIKQEFTPPHTPKYNGVAERA 505          
BLAST of mRNA_F-serratus_M_contig138.2753.1 vs. uniprot
Match: A0A6H5JAQ2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAQ2_9PHAE)

HSP 1 Score: 83.6 bits (205), Expect = 2.550e-16
Identity = 46/109 (42.20%), Postives = 59/109 (54.13%), Query Frame = 0
Query:   14 RFFVDVGGPMNHSSLGGNSYVVIFVDDCTRFKVVKFVKKKSNTTAALLSLIADYITPQKLSIKC----VRADNGGELEGAFQRELDRRSITHEHTPPDTPQYNGVTERA 118
            R ++D+ G M   S+GGN Y +I  DD +R+  V F+K KS+        +ADY T     + C     RAD GGE +G F     R  I  E TPP TP+YNGV ERA
Sbjct:  702 RVYLDLEGTMKTRSIGGNWYTLIIRDDFSRWTRVFFLKHKSDAAVGFEKFLADYRTN---GVPCEDFIARADGGGEFQGQFAEVCRRHGIKQEFTPPHTPKYNGVAERA 807          
BLAST of mRNA_F-serratus_M_contig138.2753.1 vs. uniprot
Match: A0A8J6DA37_9ROSI (Integrase catalytic domain-containing protein n=1 Tax=Gossypium anomalum TaxID=47600 RepID=A0A8J6DA37_9ROSI)

HSP 1 Score: 83.2 bits (204), Expect = 3.370e-16
Identity = 48/118 (40.68%), Postives = 60/118 (50.85%), Query Frame = 0
Query:    1 PKKTDEQLSVKGQRFFVDVGGPMNHSSLGGNSYVVIFVDDCTRFKVVKFVKKKSNTTAALLSLIADYITPQKLSIKCVRADNGGELEGA-FQRELDRRSITHEHTPPDTPQYNGVTER 117
            P  T  + S K +    DV GPM   SL GN Y ++F+DDCTR+  V F+K KS      +   A   T     IK +R+DNG E   A FQ       I H+ T   TPQ NGV+ER
Sbjct:   37 PTNTSWRASTKLELVHTDVCGPMRTESLSGNRYFILFIDDCTRYCWVYFLKHKSEVVQVFMKFKAAVETETGCKIKTIRSDNGTEYTSAQFQALCKDAGIKHQLTNVYTPQQNGVSER 154          
BLAST of mRNA_F-serratus_M_contig138.2753.1 vs. uniprot
Match: A0A6H5KPZ8_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPZ8_9PHAE)

HSP 1 Score: 82.4 bits (202), Expect = 6.200e-16
Identity = 49/120 (40.83%), Postives = 62/120 (51.67%), Query Frame = 0
Query:    2 KKTDEQLSVKGQRFFVDVGGPMNHSSLGGNSYVVIFVDDCTRFKVVKFVKKKSNTTAALLSLIADYIT---PQKLSIKCVRADNGGELEGAFQRELDRRSITHEHTPPDTPQYNGVTERA 118
            K T  +   K  R ++D+GG M   S+GGN Y +I  DD +R+  V F+K KS+        +ADY T   P K+ I   R D GGE +G F     R  I  E TPP TP Y  V ERA
Sbjct:  471 KSTSSRAVTKIFRVYLDLGGKMKTRSIGGNWYTLIIRDDFSRWTRVFFLKHKSDAAVGFEKFLADYRTEGVPCKVYI--ARTDGGGEFQGQFAEVCRRHGIKQELTPPHTPIYKDVAERA 588          
BLAST of mRNA_F-serratus_M_contig138.2753.1 vs. uniprot
Match: A0A8J5YZW8_9ROSI (Integrase catalytic domain-containing protein n=1 Tax=Gossypium anomalum TaxID=47600 RepID=A0A8J5YZW8_9ROSI)

HSP 1 Score: 81.6 bits (200), Expect = 1.180e-15
Identity = 47/118 (39.83%), Postives = 60/118 (50.85%), Query Frame = 0
Query:    1 PKKTDEQLSVKGQRFFVDVGGPMNHSSLGGNSYVVIFVDDCTRFKVVKFVKKKSNTTAALLSLIADYITPQKLSIKCVRADNGGELEGA-FQRELDRRSITHEHTPPDTPQYNGVTER 117
            P  T  + S K +    DV GPM   SL GN Y ++F+DDCTR+  + F+K KS      +   A   T     IK +R+DNG E   A FQ       I H+ T   TPQ NGV+ER
Sbjct:  169 PTNTTWRASSKLELVHTDVCGPMRTESLSGNRYFILFIDDCTRYCWIYFLKHKSEVAQVFIKFKAAVETETGCKIKTIRSDNGTEYTSAQFQSLCKDAGIKHQLTNVYTPQQNGVSER 286          
BLAST of mRNA_F-serratus_M_contig138.2753.1 vs. uniprot
Match: A0A6H5KGJ8_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGJ8_9PHAE)

HSP 1 Score: 80.9 bits (198), Expect = 1.350e-15
Identity = 43/118 (36.44%), Postives = 61/118 (51.69%), Query Frame = 0
Query:    2 KKTDEQLSVKGQRFFVDVGGPMNHSSLGGNSYVVIFVDDCTRFKVVKFVKKKSNTTAALLSLIADYITPQ-KLSIKCVRADNGGELEGAFQRELDRRSITHEHTPPDTPQYNGVTERA 118
            K T  +   K  R ++D+GG M   S+G + Y ++  DD +R+  V F+K KS+        + DY T +    +   R D+GGE +G F     R  I  E TPP TP+YN V ERA
Sbjct:  205 KSTSTRADKKLFRVYLDLGGKMKTRSIGDHWYTLMIRDDFSRWTRVFFLKHKSDAAVGFEKFLVDYRTKEVPCEVYITRTDDGGEFQGQFAEVFRRHGIKQEFTPPHTPKYNDVAERA 322          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig138.2753.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5LL52_9PHAE1.180e-2143.80Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5JM30_9PHAE2.410e-1841.53Integrase catalytic domain-containing protein (Fra... [more]
A0A6H5KAM7_9PHAE4.280e-1841.53Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5KKB4_9PHAE8.120e-1745.00Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5JIN8_9PHAE2.400e-1641.67Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5JAQ2_9PHAE2.550e-1642.20Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A8J6DA37_9ROSI3.370e-1640.68Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5KPZ8_9PHAE6.200e-1640.83Integrase catalytic domain-containing protein n=1 ... [more]
A0A8J5YZW8_9ROSI1.180e-1539.83Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5KGJ8_9PHAE1.350e-1536.44Integrase catalytic domain-containing protein n=1 ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036397Ribonuclease H superfamilyGENE3D3.30.420.10coord: 4..118
e-value: 4.8E-16
score: 60.5
IPR001584Integrase, catalytic corePFAMPF00665rvecoord: 12..117
e-value: 2.5E-13
score: 50.2
IPR001584Integrase, catalytic corePROSITEPS50994INTEGRASEcoord: 1..118
score: 15.533
IPR039537Retrotransposon Ty1/copia-likePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 9..117
NoneNo IPR availablePANTHERPTHR11439:SF250coord: 9..117
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 10..118

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig138contigF-serratus_M_contig138:343917..344270 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig138.2753.1mRNA_F-serratus_M_contig138.2753.1Fucus serratus malemRNAF-serratus_M_contig138 343917..344270 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig138.2753.1 ID=prot_F-serratus_M_contig138.2753.1|Name=mRNA_F-serratus_M_contig138.2753.1|organism=Fucus serratus male|type=polypeptide|length=118bp
PKKTDEQLSVKGQRFFVDVGGPMNHSSLGGNSYVVIFVDDCTRFKVVKFV
KKKSNTTAALLSLIADYITPQKLSIKCVRADNGGELEGAFQRELDRRSIT
HEHTPPDTPQYNGVTERA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036397RNaseH_sf
IPR001584Integrase_cat-core
IPR039537Retrotran_Ty1/copia-like
IPR012337RNaseH-like_sf