prot_F-serratus_M_contig1378.2746.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_F-serratus_M_contig1378.2746.1
Unique Name	prot_F-serratus_M_contig1378.2746.1
Type	polypeptide
Organism	Fucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length	48

Homology

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BLAST of mRNA_F-serratus_M_contig1378.2746.1 vs. uniprot
Match: A0A4P8JB02_9NEOP (Cytochrome c oxidase subunit 1 (Fragment) n=2 Tax=Alcedoffula alcyonae TaxID=1954323 RepID=A0A4P8JB02_9NEOP)

HSP 1 Score: 78.2 bits (191), Expect = 2.230e-17
Identity = 35/44 (79.55%), Postives = 41/44 (93.18%), Query Frame = 0

Query:    4 YAILSSSILGFMVWAHHMFTVGLDIDARAYFTTATMIIAVPAGI 47
            YA+LS  +LGF+VWAHHMFTVGLD+D+RAYFTTATMIIAVP G+
Sbjct:   34 YAMLSIGVLGFIVWAHHMFTVGLDVDSRAYFTTATMIIAVPTGV 77

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BLAST of mRNA_F-serratus_M_contig1378.2746.1 vs. uniprot
Match: A0A4P8JBZ5_9NEOP (Cytochrome c oxidase subunit 1 (Fragment) n=7 Tax=Alcedoffula TaxID=1195961 RepID=A0A4P8JBZ5_9NEOP)

HSP 1 Score: 77.8 bits (190), Expect = 3.170e-17
Identity = 35/44 (79.55%), Postives = 41/44 (93.18%), Query Frame = 0

Query:    4 YAILSSSILGFMVWAHHMFTVGLDIDARAYFTTATMIIAVPAGI 47
            YA+LS  +LGF+VWAHHMFTVGLD+D+RAYFTTATMIIAVP G+
Sbjct:   34 YAMLSIGLLGFIVWAHHMFTVGLDVDSRAYFTTATMIIAVPTGV 77

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BLAST of mRNA_F-serratus_M_contig1378.2746.1 vs. uniprot
Match: Q5PXH6_9ACAR (Cytochrome c oxidase subunit 1 (Fragment) n=10 Tax=Floracarus perrepae TaxID=302415 RepID=Q5PXH6_9ACAR)

HSP 1 Score: 77.4 bits (189), Expect = 3.390e-17
Identity = 36/44 (81.82%), Postives = 40/44 (90.91%), Query Frame = 0

Query:    4 YAILSSSILGFMVWAHHMFTVGLDIDARAYFTTATMIIAVPAGI 47
            YAILS  ILGF+VWAHHMFTVG+D+D+RAYFT ATMIIAVP GI
Sbjct:   19 YAILSIGILGFVVWAHHMFTVGMDVDSRAYFTVATMIIAVPTGI 62

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BLAST of mRNA_F-serratus_M_contig1378.2746.1 vs. uniprot
Match: Q9GA46_PYCHE (Cytochrome c oxidase subunit 1 (Fragment) n=2 Tax=Asteroidea TaxID=7588 RepID=Q9GA46_PYCHE)

HSP 1 Score: 76.6 bits (187), Expect = 5.410e-17
Identity = 35/44 (79.55%), Postives = 39/44 (88.64%), Query Frame = 0

Query:    4 YAILSSSILGFMVWAHHMFTVGLDIDARAYFTTATMIIAVPAGI 47
            YAI+S  ILGF+VWAHHMFTVG+D+D RAYFT ATMIIAVP GI
Sbjct:   40 YAIISIGILGFLVWAHHMFTVGMDVDTRAYFTAATMIIAVPTGI 83

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BLAST of mRNA_F-serratus_M_contig1378.2746.1 vs. uniprot
Match: D7NVB7_9ACAR (Cytochrome c oxidase subunit 1 (Fragment) n=2 Tax=Amblyseius swirskii TaxID=759916 RepID=D7NVB7_9ACAR)

HSP 1 Score: 76.3 bits (186), Expect = 6.070e-17
Identity = 35/44 (79.55%), Postives = 40/44 (90.91%), Query Frame = 0

Query:    4 YAILSSSILGFMVWAHHMFTVGLDIDARAYFTTATMIIAVPAGI 47
            YA+LS  ILGF+VWAHHMFTVG+D+D+RAYFT ATMIIAVP GI
Sbjct:   12 YAMLSIGILGFIVWAHHMFTVGMDVDSRAYFTAATMIIAVPTGI 55

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BLAST of mRNA_F-serratus_M_contig1378.2746.1 vs. uniprot
Match: I6RUD3_9NEOP (Cytochrome c oxidase subunit 1 (Fragment) n=1 Tax=Alcedoffula duplicata TaxID=1195962 RepID=I6RUD3_9NEOP)

HSP 1 Score: 77.0 bits (188), Expect = 6.360e-17
Identity = 34/44 (77.27%), Postives = 41/44 (93.18%), Query Frame = 0

Query:    4 YAILSSSILGFMVWAHHMFTVGLDIDARAYFTTATMIIAVPAGI 47
            YA++S  +LGF+VWAHHMFTVGLD+D+RAYFTTATMIIAVP G+
Sbjct:   34 YAMVSIGVLGFIVWAHHMFTVGLDVDSRAYFTTATMIIAVPTGV 77

[Close]

BLAST of mRNA_F-serratus_M_contig1378.2746.1 vs. uniprot
Match: H9U5V6_9NEOP (Cytochrome c oxidase subunit 1 (Fragment) n=1 Tax=Rallicola kelloggi TaxID=1168166 RepID=H9U5V6_9NEOP)

HSP 1 Score: 77.0 bits (188), Expect = 6.360e-17
Identity = 35/44 (79.55%), Postives = 41/44 (93.18%), Query Frame = 0

Query:    4 YAILSSSILGFMVWAHHMFTVGLDIDARAYFTTATMIIAVPAGI 47
            YA+LS  ILGF+VWAHHMFTVGLD+D+RAYFT+ATMIIAVP G+
Sbjct:   34 YAMLSIGILGFIVWAHHMFTVGLDVDSRAYFTSATMIIAVPTGV 77

[Close]

BLAST of mRNA_F-serratus_M_contig1378.2746.1 vs. uniprot
Match: Q953D1_9NEOP (Cytochrome c oxidase subunit 1 (Fragment) n=3 Tax=Philopteridae TaxID=66236 RepID=Q953D1_9NEOP)

HSP 1 Score: 77.0 bits (188), Expect = 6.520e-17
Identity = 35/44 (79.55%), Postives = 41/44 (93.18%), Query Frame = 0

Query:    4 YAILSSSILGFMVWAHHMFTVGLDIDARAYFTTATMIIAVPAGI 47
            YA+LS  ILGF+VWAHHMFTVGLD+D+RAYFT+ATMIIA+P GI
Sbjct:   35 YAMLSIGILGFIVWAHHMFTVGLDVDSRAYFTSATMIIAIPTGI 78

[Close]

BLAST of mRNA_F-serratus_M_contig1378.2746.1 vs. uniprot
Match: A0A096XQA5_9NEOP (Cytochrome c oxidase subunit 1 (Fragment) n=15 Tax=Menacanthus TaxID=160154 RepID=A0A096XQA5_9NEOP)

HSP 1 Score: 77.0 bits (188), Expect = 6.690e-17
Identity = 35/44 (79.55%), Postives = 40/44 (90.91%), Query Frame = 0

Query:    4 YAILSSSILGFMVWAHHMFTVGLDIDARAYFTTATMIIAVPAGI 47
            YA+LS  ILGF+VWAHHMFTVGLD+D RAYFT+ATMIIA+P GI
Sbjct:   35 YAMLSIGILGFLVWAHHMFTVGLDVDTRAYFTSATMIIAIPTGI 78

[Close]

BLAST of mRNA_F-serratus_M_contig1378.2746.1 vs. uniprot
Match: D8L8Y3_9ACAR (Cytochrome c oxidase subunit 1 (Fragment) n=7 Tax=Ornithonyssus TaxID=224535 RepID=D8L8Y3_9ACAR)

HSP 1 Score: 78.6 bits (192), Expect = 6.960e-17
Identity = 37/44 (84.09%), Postives = 40/44 (90.91%), Query Frame = 0

Query:    4 YAILSSSILGFMVWAHHMFTVGLDIDARAYFTTATMIIAVPAGI 47
            YA+LS  ILGF+VWAHHMFTVGLDID RAYFTTATMIIA+P GI
Sbjct:  141 YAMLSIGILGFIVWAHHMFTVGLDIDTRAYFTTATMIIAIPTGI 184

The following BLAST results are available for this feature:

BLAST of mRNA_F-serratus_M_contig1378.2746.1 vs. uniprot

BLAST of mRNA_F-serratus_M_contig1378.2746.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A4P8JB02_9NEOP	2.230e-17	79.55	Cytochrome c oxidase subunit 1 (Fragment) n=2 Tax=...	[more]
A0A4P8JBZ5_9NEOP	3.170e-17	79.55	Cytochrome c oxidase subunit 1 (Fragment) n=7 Tax=...	[more]
Q5PXH6_9ACAR	3.390e-17	81.82	Cytochrome c oxidase subunit 1 (Fragment) n=10 Tax...	[more]
Q9GA46_PYCHE	5.410e-17	79.55	Cytochrome c oxidase subunit 1 (Fragment) n=2 Tax=...	[more]
D7NVB7_9ACAR	6.070e-17	79.55	Cytochrome c oxidase subunit 1 (Fragment) n=2 Tax=...	[more]
I6RUD3_9NEOP	6.360e-17	77.27	Cytochrome c oxidase subunit 1 (Fragment) n=1 Tax=...	[more]
H9U5V6_9NEOP	6.360e-17	79.55	Cytochrome c oxidase subunit 1 (Fragment) n=1 Tax=...	[more]
Q953D1_9NEOP	6.520e-17	79.55	Cytochrome c oxidase subunit 1 (Fragment) n=3 Tax=...	[more]
A0A096XQA5_9NEOP	6.690e-17	79.55	Cytochrome c oxidase subunit 1 (Fragment) n=15 Tax...	[more]
D8L8Y3_9ACAR	6.960e-17	84.09	Cytochrome c oxidase subunit 1 (Fragment) n=7 Tax=...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000883	Cytochrome c oxidase subunit I	PFAM	PF00115	COX1	coord: 1..47 e-value: 7.2E-11 score: 41.6
IPR000883	Cytochrome c oxidase subunit I	PANTHER	PTHR10422	CYTOCHROME C OXIDASE SUBUNIT 1	coord: 3..47
IPR036927	Cytochrome c oxidase-like, subunit I superfamily	GENE3D	1.20.210.10		coord: 1..47 e-value: 3.6E-15 score: 57.2
IPR036927	Cytochrome c oxidase-like, subunit I superfamily	SUPERFAMILY	81442	Cytochrome c oxidase subunit I-like	coord: 2..47
None	No IPR available	PANTHER	PTHR10422:SF18	CYTOCHROME C OXIDASE SUBUNIT 1	coord: 3..47
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE	Signal Peptide	coord: 1..18
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_C_REGION	Signal peptide C-region	coord: 15..18
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_H_REGION	Signal peptide H-region	coord: 4..14
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 19..47
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_N_REGION	Signal peptide N-region	coord: 1..3
None	No IPR available	TMHMM	TMhelix		coord: 2..24
IPR023616	Cytochrome c oxidase-like, subunit I domain	PROSITE	PS50855	COX1	coord: 1..47 score: 13.103

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
F-serratus_M_contig1378	contig	F-serratus_M_contig1378:7078..7221 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Fucus serratus MALE	2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90	2022-09-16
OGS1.0 of Fucus serratus male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_F-serratus_M_contig1378.2746.1	mRNA_F-serratus_M_contig1378.2746.1	Fucus serratus male	mRNA	F-serratus_M_contig1378 6487..7383 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_F-serratus_M_contig1378.2746.1 ID=prot_F-serratus_M_contig1378.2746.1|Name=mRNA_F-serratus_M_contig1378.2746.1|organism=Fucus serratus male|type=polypeptide|length=48bp
MVYYAILSSSILGFMVWAHHMFTVGLDIDARAYFTTATMIIAVPAGI*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR000883	Cyt_C_Oxase_1
IPR036927	Cyt_c_oxase-like_su1_sf
IPR023616	Cyt_c_oxase-like_su1_dom