prot_F-serratus_M_contig1376.2737.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig1376.2737.1
Unique Nameprot_F-serratus_M_contig1376.2737.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length338
Homology
BLAST of mRNA_F-serratus_M_contig1376.2737.1 vs. uniprot
Match: A0A6H5JFK6_9PHAE (START domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JFK6_9PHAE)

HSP 1 Score: 345 bits (885), Expect = 3.840e-113
Identity = 183/347 (52.74%), Postives = 237/347 (68.30%), Query Frame = 0
Query:    1 MFGVHVCSKPKPPEEGSSLVVCKGQMALPPEVTLNLPQVQFIHAYNNTASLVRQMKESDPMSKETKILYQVPCGDEEFIRIVWGSFRAAGVAWARDFCFLQHGCTTTDPDSGERIFAVVAGSIERPEVPDMETLCKRIRSKVKTSGYVFREATDG-TLRVSYVVNVNPGGWIPSKIVNVICTSQAMNVSRVGSKMKTTAKALKALEMEPPIQSTRIAWRCIDEVPLSPPAAGASSPWTVSIKFWADNKVWFRIRVASGGATTNWKPEGMASTVGEGQWELCQARTVVRIGFTFKLVGAATSGE-----------DEAALKQHAEACVLEFKSGGWTKGVSVFYAIDI 335
            +FGV V S+P P +  SSLV+C+GQ+ L  +VT  + + QF+  +N +  L +QM+ SDPMS+ETKILYQ+PC + E IRI WGSF+AAGVAWARDFCFLQH   +TDP +GER+F VV+GSIERPEVPDME LCKRIRS VKTSG VFRE  DG  +R +YVVNVNP GWIPSKIVN+ICT+QAMNVSRV +K+  TAKAL AL++E PI    I WR   E PL  PA G+++  TVS+KF A +KV FR+ V +  ATT+W P   ++ VG G+     A T   +  TFKL   A SG             +  L++   + VLE+K  GW  G+ +++ +++
Sbjct:  122 LFGVKVWSRPNPDDSDSSLVICRGQIPLTQDVTFEMVKTQFVDVFNTSEILAQQMRASDPMSRETKILYQIPCEEGELIRISWGSFKAAGVAWARDFCFLQHAAASTDPATGERLFCVVSGSIERPEVPDMEKLCKRIRSTVKTSGLVFREPKDGGPMRATYVVNVNPNGWIPSKIVNIICTNQAMNVSRVKNKLHETAKALAALKIEAPIFPKAIGWRQTHEFPLRRPAPGSAAS-TVSVKFSATSKVTFRV-VGATAATTDWAPAEASTGVGAGETVTYPADTPTTM--TFKLRPEAASGNGARRGGGAVGASDVELEEAKSSVVLEWKGAGWFGGLVIYHLVEV 464          
BLAST of mRNA_F-serratus_M_contig1376.2737.1 vs. uniprot
Match: UPI00138FA963 (uncharacterized protein LOC116617779 n=1 Tax=Nematostella vectensis TaxID=45351 RepID=UPI00138FA963)

HSP 1 Score: 82.0 bits (201), Expect = 1.320e-13
Identity = 44/129 (34.11%), Postives = 72/129 (55.81%), Query Frame = 0
Query:   67 ILYQVPCGDEE----FIRIVWGSFRAAGVAWARDFCFLQHGCTTTDPDSGERIFAVVAGSIERPEVPDMETLCKRIRSKVKTSGYVFREATDGT-LRVSYVVNVNPGGWIPSKIVNVICTSQAMNVSRV 190
            +L+Q P G +     F  I W      G  W+RD C+L++G   TD D G+ +   V  S+ RPE P M+     +R+ +  +GYVFR + D   + V+YV+  +P GWIP+  V++    +A+N++R+
Sbjct:  211 MLHQFPSGYKHPNVPFFSIKWAIIGQPGPIWSRDVCWLEYGDIVTD-DDGKEVGFGVGSSVSRPECPPMDHY-HLVRADLMCTGYVFRPSDDADYMEVTYVMQADPKGWIPTWAVSLFAWQEALNLARI 337          
BLAST of mRNA_F-serratus_M_contig1376.2737.1 vs. uniprot
Match: A0A7S4DQV3_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Lotharella globosa TaxID=91324 RepID=A0A7S4DQV3_9EUKA)

HSP 1 Score: 58.5 bits (140), Expect = 5.640e-6
Identity = 49/169 (28.99%), Postives = 77/169 (45.56%), Query Frame = 0
Query:   45 YNNTASLVRQMKESDPM---SKETKI---LYQVPCGDEEFIRIVWGSFRAAGVAWARDFCFLQHGCTTTDPDSGERIFAVVAGSIERP--EVP-DMETLCKRIRSKVKTSGYVFREATDGTLRVSYVVNVNPGGWIPSKIVNVICTSQAMNVSRVGSKMKTTAKALKAL 204
            ++ + +  + MK +DPM    K+ +I   LYQ            + +F       ARDF F +   T  D        +V A   E P  + P D       IR  +  SGY+ +  T  T  V+Y+V V+P GW+P+ +V V+   QA+NV+R+    K   K + +L
Sbjct:   76 WSESKNWAKHMKIADPMFIKGKKQRIGNGLYQN-----------YAAFALPAGVTARDFTFHELIVTLNDN-------SVAAICWEEPWKDYPMDTSYFPSYIRGSIIMSGYLAKPLTPNTCEVTYLVQVDPKGWLPAWVVEVVAPDQALNVTRLRDYFKALRKHMPSL 226          
BLAST of mRNA_F-serratus_M_contig1376.2737.1 vs. uniprot
Match: A0A0L0HBN0_SPIPD (Uncharacterized protein n=2 Tax=Spizellomyces TaxID=4815 RepID=A0A0L0HBN0_SPIPD)

HSP 1 Score: 57.8 bits (138), Expect = 1.890e-5
Identity = 47/184 (25.54%), Postives = 88/184 (47.83%), Query Frame = 0
Query:   14 EEGSSLVVCKGQMALPPEVTLNLPQVQFIHAYNNTASLVRQMKESDPMSKETKILYQVPCGDEEFIRIVWGSFRAAGVAWARDFCFLQHGCTTTDPDSGERIFAVVAGSIERPEVPDMETLCKRIRSKVKTSGYVFREATDGT-LRVSYVVNVNPGGWIPSKIVNVICTSQAMNVSRVGSKMKT 196
            E+GS + V +G    PPE T++    + ++   ++ +     K  D   ++   +  +   ++ F  +  G F  +G    RD C LQ     T  D+      +VA S+  P VP      KR+R+ +K +G++ +   +G  + ++Y+VN++P G IPS IV  +     + V+ V   ++T
Sbjct:  886 EDGSPMPVVRGDSVFPPEFTVD----EIVNVLRSSGA----RKIWDARFEDGDTVEWLNPNEQVFRSLQKGQFPVSG----RDICGLQ----VTVFDARSSTTYIVATSVNDPLVPVDP---KRVRADLKVAGWILQPVPNGGGVSITYIVNIDPKGSIPSAIVKAVSAQTPLCVAEVLKYLRT 1050          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1376.2737.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5JFK6_9PHAE3.840e-11352.74START domain-containing protein n=2 Tax=Ectocarpus... [more]
UPI00138FA9631.320e-1334.11uncharacterized protein LOC116617779 n=1 Tax=Nemat... [more]
A0A7S4DQV3_9EUKA5.640e-628.99Hypothetical protein (Fragment) n=1 Tax=Lotharella... [more]
A0A0L0HBN0_SPIPD1.890e-525.54Uncharacterized protein n=2 Tax=Spizellomyces TaxI... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR023393START-like domain superfamilyGENE3D3.30.530.20coord: 2..202
e-value: 4.4E-23
score: 84.1
IPR002913START domainPFAMPF01852STARTcoord: 75..189
e-value: 1.9E-7
score: 30.7
IPR002913START domainPROSITEPS50848STARTcoord: 95..177
score: 12.94
NoneNo IPR availableSUPERFAMILY55961Bet v1-likecoord: 16..186

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1376contigF-serratus_M_contig1376:1413..4659 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1376.2737.1mRNA_F-serratus_M_contig1376.2737.1Fucus serratus malemRNAF-serratus_M_contig1376 1001..15078 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig1376.2737.1 ID=prot_F-serratus_M_contig1376.2737.1|Name=mRNA_F-serratus_M_contig1376.2737.1|organism=Fucus serratus male|type=polypeptide|length=338bp
MFGVHVCSKPKPPEEGSSLVVCKGQMALPPEVTLNLPQVQFIHAYNNTAS
LVRQMKESDPMSKETKILYQVPCGDEEFIRIVWGSFRAAGVAWARDFCFL
QHGCTTTDPDSGERIFAVVAGSIERPEVPDMETLCKRIRSKVKTSGYVFR
EATDGTLRVSYVVNVNPGGWIPSKIVNVICTSQAMNVSRVGSKMKTTAKA
LKALEMEPPIQSTRIAWRCIDEVPLSPPAAGASSPWTVSIKFWADNKVWF
RIRVASGGATTNWKPEGMASTVGEGQWELCQARTVVRIGFTFKLVGAATS
GEDEAALKQHAEACVLEFKSGGWTKGVSVFYAIDITP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR023393START-like_dom_sf
IPR002913START_lipid-bd_dom