prot_F-serratus_M_contig1375.2735.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig1375.2735.1
Unique Nameprot_F-serratus_M_contig1375.2735.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length299
Homology
BLAST of mRNA_F-serratus_M_contig1375.2735.1 vs. uniprot
Match: A0A6H5L5U2_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5U2_9PHAE)

HSP 1 Score: 281 bits (718), Expect = 8.180e-89
Identity = 158/338 (46.75%), Postives = 202/338 (59.76%), Query Frame = 0
Query:    1 MDDHLSNIGFRSLKSDPCVYL--------------------------LCKLKKQLMDRFKMTYLGDASKVLGMMVTRDQENGMITIDQKDYADDILERDVMPNCNVAFTPGVGPKIYFDQPADRLLDEQRKPRRS-------------RYDIFYAINQLARAIFKPSKAHMGAAKHVLRYLTGCVNFPITYRRGGFTLMAYTDANKRGHLGNGRLTSSYIMMLANGPIIFKVGLQSLIAQSTREAELVATATTTKGSLFCRNMMMELGFTEGFSSVHVYIDNISTLHVVGNRRFSPRAKYIVLRYVFVQELMKKGKATIHFVKTEQQLADLGTKHLKK 299
            +D  +  IGF +LKSDPCVYL                          +  +K +L  RFKMT LG+AS VLGM + RD+E   +TI Q+ Y   ILER  M       TPG G +I   QP D LLDE+   +               RYDI YA  QLAR + KPSK HM AAKH LRYL G ++F ITY++GGF L  ++D+N   +  NG+ TSSY+ MLAN P+ F+ GLQ L A ST EAELVA+A   K ++FC NMM ELGF + F+ + VY DN +TLH +GNR FS R K+I LR+ F++EL+ +GK +IH+  TE  LAD+GTKH  K
Sbjct:   85 IDPVIVEIGFVALKSDPCVYLYDHNGAKIYLTLYVDDLLLAGNDSDAISMVKGKLQKRFKMTDLGEASLVLGMEIRRDREANTLTISQEAYCKSILERFGMSGSKPTSTPGYGSEISNIQPEDTLLDEKETRKYQGIVGSLMYIAQVLRYDIMYATGQLARPMAKPSKVHMVAAKHTLRYLAGTIDFSITYKKGGFKLATFSDSNWANNPDNGKSTSSYLTMLANAPMSFRSGLQGLTAMSTMEAELVASALAMKEAVFCSNMMTELGFGKEFAQLPVYCDNTATLHALGNRSFSSRTKHIALRFFFIRELVTEGKISIHYFPTEDNLADIGTKHFNK 422          
BLAST of mRNA_F-serratus_M_contig1375.2735.1 vs. uniprot
Match: A0A6H5KNH5_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNH5_9PHAE)

HSP 1 Score: 280 bits (717), Expect = 1.200e-83
Identity = 158/335 (47.16%), Postives = 202/335 (60.30%), Query Frame = 0
Query:    1 MDDHLSNIGFRSLKSDPCVYL--------------------------LCKLKKQLMDRFKMTYLGDASKVLGMMVTRDQENGMITIDQKDYADDILERDVMPNCNVAFTPGVGPKIYFDQPADRLLDEQRKPRRS-------------RYDIFYAINQLARAIFKPSKAHMGAAKHVLRYLTGCVNFPITYRRGGFTLMAYTDANKRGHLGNGRLTSSYIMMLANGPIIFKVGLQSLIAQSTREAELVATATTTKGSLFCRNMMMELGFTEGFSSVHVYIDNISTLHVVGNRRFSPRAKYIVLRYVFVQELMKKGKATIHFVKTEQQLADLGTKH 296
            +D  L  IGF +LKSDPCVYL                          +  +K +L  RFKMT LG+AS VL M + RD+E   +TI Q+ Y   ILER  M       TPG G +I   QP D LLDE+   +               RYDI YA  QLAR + KPSK HM AAKH LRYL G ++F ITY++GGF L  ++D+N   +  NG+ TSSY+ MLAN P+ F+ GLQ L A ST EAELVA+A   K ++FC NMM ELGF + F+ + VY DN +TLH +GNR FS R K+I LR+ F++EL+ +GK +IH+V+TE  LAD+GTKH
Sbjct:  645 IDPVLVEIGFVALKSDPCVYLYDHNGAKIYLTLYVDDLLLAGNDSDAISMVKGKLQKRFKMTDLGEASLVLRMEIRRDREANTLTISQEAYCKSILERFGMSGSKPTSTPGYGSEISNIQPEDTLLDEKETRKYQGIVGSLMYIAQVLRYDIMYATGQLARPMAKPSKVHMVAAKHTLRYLAGTIDFSITYKKGGFKLATFSDSNWANNPDNGKSTSSYLTMLANAPMSFRSGLQGLTAMSTMEAELVASALAMKEAVFCSNMMTELGFGKEFAQLPVYCDNTATLHALGNRSFSSRTKHIALRFFFIRELVTEGKISIHYVRTEDNLADIGTKH 979          
BLAST of mRNA_F-serratus_M_contig1375.2735.1 vs. uniprot
Match: A0A6H5JME8_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JME8_9PHAE)

HSP 1 Score: 265 bits (678), Expect = 1.780e-80
Identity = 143/285 (50.18%), Postives = 183/285 (64.21%), Query Frame = 0
Query:   28 QLMDRFKMTYLGDASKVLGMMVTRDQENGMITIDQKDYADDILERDVMPNCNVAFTPGVGPKIYFDQPADRLLDEQRKPRRS-------------RYDIFYAINQLARAIFKPSKAHMGAAKHVLRYLTGCVNFPITYRRGGFTLMAYTDANKRGHLGNGRLTSSYIMMLANGPIIFKVGLQSLIAQSTREAELVATATTTKGSLFCRNMMMELGFTEGFSSVHVYIDNISTLHVVGNRRFSPRAKYIVLRYVFVQELMKKGKATIHFVKTEQQLADLGTKHLKK 299
            +L  RFKMT LG+AS  LGM + RD+E   +TI Q+ Y   ILER  M       TPG G +I   QP D LLDE+   +               RYDI YA  QLAR++ KPSK HM AAKH LRYL G ++F ITY++GGF L  ++D+N   +  NG+ TSSY+ MLAN P+ F+ GLQ L A ST EAELVA+A   K ++FC NMM ELG  + F+ + VY DN +TLH +GNR FS R K+I LR+ F++EL+ +GK +IH+V TE  LAD+GTKH  K
Sbjct:  359 KLQKRFKMTDLGEASFALGMKIRRDREANTLTISQEAYCKSILERFGMSGSKPTSTPGYGSEISNIQPEDTLLDEKETRKYQGIVGSLMYIAQVLRYDIMYATGQLARSMAKPSKVHMVAAKHTLRYLAGTIDFSITYKKGGFKLATFSDSNWANNPDNGKSTSSYLTMLANAPMSFRSGLQGLTAMSTMEAELVASALAMKEAVFCSNMMTELGSGKEFAQLPVYCDNTATLHALGNRSFSSRTKHIALRFFFIRELVTEGKISIHYVPTEDNLADIGTKHFNK 643          
BLAST of mRNA_F-serratus_M_contig1375.2735.1 vs. uniprot
Match: A0A6H5KJH6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJH6_9PHAE)

HSP 1 Score: 274 bits (701), Expect = 4.300e-80
Identity = 156/338 (46.15%), Postives = 201/338 (59.47%), Query Frame = 0
Query:    1 MDDHLSNIGFRSLKSDPCVYL--------------------------LCKLKKQLMDRFKMTYLGDASKVLGMMVTRDQENGMITIDQKDYADDILERDVMPNCNVAFTPGVGPKIYFDQPADRLLDEQRKPRRS-------------RYDIFYAINQLARAIFKPSKAHMGAAKHVLRYLTGCVNFPITYRRGGFTLMAYTDANKRGHLGNGRLTSSYIMMLANGPIIFKVGLQSLIAQSTREAELVATATTTKGSLFCRNMMMELGFTEGFSSVHVYIDNISTLHVVGNRRFSPRAKYIVLRYVFVQELMKKGKATIHFVKTEQQLADLGTKHLKK 299
            +D  L  IGF +LKSDPCVYL                          +  +K +L  RFKMT LG+AS VLGM + RD+E   +TI Q+ Y   ILER  +       TPG G +I   QP D LLDE+   +               RYDI YA  QLAR + KPSK HM AAKH LRYL G ++F ITY++GGF L  ++D+N   +  NG+ TSSY+ +LAN P+ F+ GLQ L A ST EAELVA+A     ++F  NMM ELGF + F+ + VY DN +TLH +GNR FS R K+I LR+ F++EL+ +GK +IH+V TE  LAD+GTKH  K
Sbjct: 1314 IDPVLVEIGFVALKSDPCVYLYDHNGAKIYLTLYVDDLLLAGNDSDAISMVKGKLQKRFKMTDLGEASLVLGMEIRRDREANTLTISQEAYCKSILERFGISGSKPTSTPGYGSEISNIQPEDTLLDEKETRKYQGIVGSLMYIAQVLRYDIMYATGQLARPMAKPSKVHMVAAKHTLRYLAGTIDFSITYKKGGFKLATFSDSNWANNPDNGKSTSSYLTVLANAPMSFRSGLQGLTAMSTMEAELVASALAMNEAVFFSNMMTELGFGKEFAQLPVYCDNTATLHALGNRSFSSRTKHIALRFFFIRELVTEGKISIHYVPTEDNLADIGTKHFNK 1651          
BLAST of mRNA_F-serratus_M_contig1375.2735.1 vs. uniprot
Match: A0A6H5J6N1_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J6N1_9PHAE)

HSP 1 Score: 229 bits (585), Expect = 2.510e-68
Identity = 131/307 (42.67%), Postives = 182/307 (59.28%), Query Frame = 0
Query:    1 MDDHLSNIGFRSLKSDPCVYLLCK--------------------------LKKQLMDRFKMTYLGDASKVLGMMVTRDQENGMITIDQKDYADDILERDVMPNCNVAFTPGVGPKIYFDQPADRLLDEQRKPRRSRYDIFYAINQLARAIFKPSKAHMGAAKHVLRYLTGCVNFPITYRRGGFTLMAYTDANKRGHLGNGRLTSSYIMMLANGPIIFKVGLQSLIAQSTREAELVATATTTKGSLFCRNMMMELGFTEGFSSVHVYIDNISTLHVVGNRRFSPRAKYIVLRYVFVQELMKKGKATIH 281
            +D  L  +G   LKSD CVY+  +                          +K +LM++F+M+ LG+ S VLGM VTRD E+G +TI Q DY   IL R  M  C     P VG ++  +QP + +L++++             +QLAR + K +KAHMGAAKH+LR   G  +F ITY+RGGF L A++DAN   +  N R TSSY++M++  P+ FK GLQ L   ST EAEL+A A T K ++FC NMM ELGF + F  V +YI+N +TLHV+GN+ +S R K+I L +  V+EL+K+G  TIH
Sbjct:  208 IDLKLIELGCNPLKSDSCVYIYKRNHTIVIITLYVDDLVVIGGNIEVIEAIKTKLMEQFQMSVLGNVSLVLGMQVTRDGEHGTLTITQADYTRSILARFGMEECKPTSIPSVGSELSTEQPTETVLNKEKTQ-----------SQLARVMSKAAKAHMGAAKHLLR---GTQDFCITYKRGGFKLTAFSDANWESNPDNARSTSSYMIMMSKAPVSFKTGLQDLTVMSTMEAELLAAALTMKEAVFCSNMMTELGFGQQFGQVPLYINNTATLHVIGNQAYSSRTKHIALLFFCVRELVKEGAITIH 500          
BLAST of mRNA_F-serratus_M_contig1375.2735.1 vs. uniprot
Match: A0A6H5L6R7_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6R7_9PHAE)

HSP 1 Score: 225 bits (574), Expect = 1.860e-64
Identity = 131/312 (41.99%), Postives = 186/312 (59.62%), Query Frame = 0
Query:    1 MDDHLSNIGFRSLKSDPCVYLLCKLKKQLMDRFKMTYLGDASKVLGMMVTRDQENGMITIDQKDYADDILERDVMPNCNVAFTPGVGPKIYFDQPADRLLDEQRKPRR-------------SRYDIFYAINQLARAIFKPSKAHMGAAKHVLRYLTGCVNFPITYRRGGFTLMAYTDANKRGHLGNGRLTSSYIMMLANGPIIFKVGLQSLIAQSTREAELVATATTTKGSLFCRNMMMELGFTEGFSSVHVYIDNISTLHVVGNRRFSPRAKYIVLRYVFVQELMKKGKATIHFVKTEQQLADLGTKHLKK 299
            +D  L  IGF  LKSD CVY+       ++      Y+ D      +++ R    G       +Y   IL+R  M +C    T G GP++   QP + LL+ + K R              +RYDI Y  +Q ARA+  PSK HMGAAKH+LRYL+G  +F ITY+RGGF L A ++AN   +  NG+  SSYIMM++  P   K GLQSL A ST EAELVA+A   K  +FC NMM ELGF   FSS  ++ID+ +TL+V+GN+ FS   K++ LR+ ++++++K+G+ +IH++ TE  LAD+GT++L K
Sbjct:  465 IDSSLVEIGFFPLKSDTCVYIYDHNNTVVV---LTLYVDD------LLIIR----GGAHHQPGNYTTSILDRFGMGSCKPLSTAGFGPELSVKQPEETLLNAEGKQRYQAIIGSVMYLAQVTRYDIMYCASQFARAMSNPSKIHMGAAKHLLRYLSGSRDFSITYKRGGFDLTASSNANGGHNTDNGKSMSSYIMMMSTAPASLKSGLQSLTAMSTVEAELVASALAMKEVIFCTNMMKELGFGSEFSSAPLFIDSTATLNVIGNQTFSGHTKHMALRFFYIRKIVKEGRISIHYIPTEDNLADIGTEYLNK 763          
BLAST of mRNA_F-serratus_M_contig1375.2735.1 vs. uniprot
Match: A0A6H5KBU1_9PHAE (CCHC-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBU1_9PHAE)

HSP 1 Score: 222 bits (566), Expect = 2.180e-62
Identity = 120/247 (48.58%), Postives = 165/247 (66.80%), Query Frame = 0
Query:   53 QENGMITIDQKDYADDILERDVMPNCNVAFTPGVGPKIYFDQPADRLLDEQRKPRRSRYDIFYAINQLARAIFKPSKAHMGAAKHVLRYLTGCVNFPITYRRGGFTLMAYTDANKRGHLGNGRLTSSYIMMLANGPIIFKVGLQSLIAQSTREAELVATATTTKGSLFCRNMMMELGFTEGFSSVHVYIDNISTLHVVGNRRFSPRAKYIVLRYVFVQELMKKGKATIHFVKTEQQLADLGTKHLKK 299
            +E+G +T  Q++Y + IL+R  M +     T G GP++     +   L +      +RYDI Y  +QLARA+  PSK HMGAAKH+LRYL+G  +F ITY+RGGF L A +DAN   +  N +  SSYIMM++  P+ FK GLQSL A ST EAELVA A   K ++FC NMM ELGF   F S  +YI N +TLHV+GN+ FS R K++ LR+ +++E++K+G+ +IH++ TE  LAD+GTKHL K
Sbjct:  435 EEDGELTNSQENYPNSILDRFGMGSWKPLSTAGFGPELSAIIGSVIYLAQI-----TRYDIMYCASQLARAMSNPSKIHMGAAKHLLRYLSGSRDFSITYKRGGFDLTALSDANWGNNPDNRKSMSSYIMMMSKAPVSFKFGLQSLTAMSTLEAELVAAALAMKETIFCTNMMKELGFGSEFRSAPLYI-NTATLHVIGNQTFSGRTKHVALRFFYIREIVKEGRISIHYIPTEDNLADIGTKHLNK 675          
BLAST of mRNA_F-serratus_M_contig1375.2735.1 vs. uniprot
Match: A0A6H5JF46_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JF46_9PHAE)

HSP 1 Score: 214 bits (546), Expect = 1.060e-60
Identity = 126/338 (37.28%), Postives = 186/338 (55.03%), Query Frame = 0
Query:    1 MDDHLSNIGFRSLKSDPCVYL--------------------------LCKLKKQLMDRFKMTYLGDASKVLGMMVTRDQENGMITIDQKDYADDILERDVMPNCNVAFTPGVGPKIYFDQPADRLLDEQRKPRR-------------SRYDIFYAINQLARAIFKPSKAHMGAAKHVLRYLTGCVNFPITYRRGGFTLMAYTDANKRGHLGNGRLTSSYIMMLANGPIIFKVGLQSLIAQSTREAELVATATTTKGSLFCRNMMMELGFTEGFSSVHVYIDNISTLHVVGNRRFSPRAKYIVLRYVFVQELMKKGKATIHFVKTEQQLADLGTKHLKK 299
            ++D L   G++  +SDPCVY+                          + + KK+LMD F+MT +G+  +V+G+ V RD E+G + I Q  YA DIL+R  M   N   TPG G ++  +QP D+LL  + K R              +RYD+ YA++QL RA   P++ HM AAKH+LRYL G  + PI Y++G F L  +TD++   +  NGR T+ Y+  L  G I +    Q+L AQ+T EAEL A + + + +++  N M E+GF + F SV +  D+   L V  N  FS R K+I LR+ F++EL K  + T+H   +   LAD+ TKHL K
Sbjct:  383 INDRLIIFGWQRTRSDPCVYIFVSGDELTILAIYVDDILITGGNKEIVSRKKKELMDSFEMTDMGEVKRVIGIEVQRDYEHGTLAISQGPYARDILQRYGMEQANPVSTPGYGVELSTEQPQDQLLGPEDKQRFQAITGSLLYLAQCTRYDLSYAVHQLTRACANPAQVHMAAAKHLLRYLRGTPDLPIVYKKGKFRLSCFTDSSFGANPDNGRSTTGYLFFLGGGLISYGAKAQTLAAQNTVEAELQALSFSAREAVYISNFMTEIGF-KTFRSVPINSDSTGALTVASNAMFSSRTKHIALRFFFLRELTKGHRITLHHQPSATMLADIATKHLPK 719          
BLAST of mRNA_F-serratus_M_contig1375.2735.1 vs. uniprot
Match: A0A6H5KHG5_9PHAE (Uncharacterized protein n=11 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHG5_9PHAE)

HSP 1 Score: 191 bits (486), Expect = 2.570e-51
Identity = 113/309 (36.57%), Postives = 168/309 (54.37%), Query Frame = 0
Query:    1 MDDHLSNIGFRSLKSDPCVYL--------------------------LCKLKKQLMDRFKMTYLGDASKVLGMMVTRDQENGMITIDQKDYADDILERDVMPNCNVAFTPGVGPKIYFDQPADRLLDEQRKPRR-------------SRYDIFYAINQLARAIFKPSKAHMGAAKHVLRYLTGCVNFPITYRRGGFTLMAYTDANKRGHLGNGRLTSSYIMMLANGPIIFKVGLQSLIAQSTREAELVATATTTKGSLFCRNMMMELGFTEGFSSVHVYIDNISTLHVVGNRRFSPRAKYIVLRYVFVQ 270
            ++D L   G++  +SDPCVY+                          +   KK+LMD F+MT +G+  +V+G+ V RD E+G + I Q  YA DIL+R  M   N   TPG G ++  +QP D+LL  + K R              +RYD+ YA++QL RA   P++ HM AAKH+LRYL G  + PI Y++G F L  +TD++   +  NGR T+ Y+  L  G I +    Q+L AQ+T EAEL A + + + +++  N M E+GF + F SV +  D+   L V  N  FS R K+I LR+ F++
Sbjct: 1162 INDRLIIFGWQRTRSDPCVYIFVSGDELTILAIYVDDILITGGNKEIVSSKKKELMDSFEMTDMGEVKRVIGIEVQRDYEHGTLAISQGPYARDILQRYGMEQANPVSTPGYGAELSTEQPQDQLLGPEDKQRFQAITGSLLYLAQCTRYDLSYAVHQLTRACANPAQVHMAAAKHLLRYLRGTPDLPIVYKKGQFRLSCFTDSSFGANPDNGRSTTGYLFFLGGGLISYGAKAQTLAAQNTVEAELQALSFSAREAVYISNFMTEIGF-KTFRSVPINSDSTGALTVASNAMFSSRTKHIALRFFFLR 1469          
BLAST of mRNA_F-serratus_M_contig1375.2735.1 vs. uniprot
Match: A0A6H5KNV2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNV2_9PHAE)

HSP 1 Score: 178 bits (452), Expect = 6.630e-51
Identity = 89/156 (57.05%), Postives = 111/156 (71.15%), Query Frame = 0
Query:  110 RYDIFYAINQLARAIFKPSKAHMGAAKHVLRYLTGCVNFPITYRRGGFTLMAYTDANKRGHLGNGRLTSSYIMMLANGPIIFKVGLQSLIAQSTREAELVATATTTKGSLFCRNMMMELGFTEGFSSVHVYIDNISTLHVVGNRRFSPRAKYIVLR 265
            RYDI YA  QLAR + KPSK HM AAKH LRYL G ++F ITY++GGF L  ++D+N   +  NG+ TSSY+ MLAN P+ F+ GLQ L A ST EAELVA+A   K ++FC NMM ELGF + F+ + VY DN +TLH +GNR FS R K+I LR
Sbjct:  110 RYDIMYATGQLARPMAKPSKVHMVAAKHTLRYLAGTIDFSITYKKGGFKLATFSDSNWANNPDNGKSTSSYLTMLANAPMSFRSGLQGLTAMSTMEAELVASALAMKEAVFCSNMMTELGFGKEFAQLPVYCDNTATLHALGNRSFSSRTKHIALR 265          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1375.2735.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L5U2_9PHAE8.180e-8946.75Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5KNH5_9PHAE1.200e-8347.16Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5JME8_9PHAE1.780e-8050.18Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5KJH6_9PHAE4.300e-8046.15Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5J6N1_9PHAE2.510e-6842.67Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5L6R7_9PHAE1.860e-6441.99Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5KBU1_9PHAE2.180e-6248.58CCHC-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5JF46_9PHAE1.060e-6037.28Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5KHG5_9PHAE2.570e-5136.57Uncharacterized protein n=11 Tax=Ectocarpus sp. CC... [more]
A0A6H5KNV2_9PHAE6.630e-5157.05Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 22..84
e-value: 1.0E-8
score: 35.2
NoneNo IPR availablePANTHERPTHR11439:SF275coord: 110..284
IPR039537Retrotransposon Ty1/copia-likePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 110..284

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1375contigF-serratus_M_contig1375:137012..137985 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1375.2735.1mRNA_F-serratus_M_contig1375.2735.1Fucus serratus malemRNAF-serratus_M_contig1375 136575..137985 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig1375.2735.1 ID=prot_F-serratus_M_contig1375.2735.1|Name=mRNA_F-serratus_M_contig1375.2735.1|organism=Fucus serratus male|type=polypeptide|length=299bp
MDDHLSNIGFRSLKSDPCVYLLCKLKKQLMDRFKMTYLGDASKVLGMMVT
RDQENGMITIDQKDYADDILERDVMPNCNVAFTPGVGPKIYFDQPADRLL
DEQRKPRRSRYDIFYAINQLARAIFKPSKAHMGAAKHVLRYLTGCVNFPI
TYRRGGFTLMAYTDANKRGHLGNGRLTSSYIMMLANGPIIFKVGLQSLIA
QSTREAELVATATTTKGSLFCRNMMMELGFTEGFSSVHVYIDNISTLHVV
GNRRFSPRAKYIVLRYVFVQELMKKGKATIHFVKTEQQLADLGTKHLKK
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013103RVT_2
IPR039537Retrotran_Ty1/copia-like