prot_F-serratus_M_contig137.2729.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig137.2729.1
Unique Nameprot_F-serratus_M_contig137.2729.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length114
Homology
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BLAST of mRNA_F-serratus_M_contig137.2729.1 vs. uniprot
Match: D8LH89_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LH89_ECTSI)

HSP 1 Score: 131 bits (329), Expect = 2.270e-37
Identity = 74/112 (66.07%), Postives = 87/112 (77.68%), Query Frame = 0 
Query:    2 KFTAIFLALWAMCASAFIAPSAVVKSRRFVTPEVRSTSSTVAPKTTMNMGLEQIVDIVPMVPTEAHDQVLEIANNPLLLSLTASSFGGLTGPIAGCTAVALLIVVLAPPRVD 113
            K  A+  AL+  CASAFIAPSAV KS  F TP VR+TS  VAPK  M MGLEQI D++P+VP+EAH+   E+ANNPLLLS++A SFGGL GPI GC AVA+ IVV+APPRVD
Sbjct:    4 KLFAVLFALYCACASAFIAPSAV-KSGSFATPAVRATSM-VAPK--MTMGLEQIADVLPLVPSEAHNAGFEMANNPLLLSVSADSFGGLIGPIGGCLAVAIFIVVMAPPRVD 111
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig137.2729.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LH89_ECTSI2.270e-3766.07Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 23..86
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..14
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 15..22
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 87..108
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..22
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 109..113
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..17
score: 0.822
NoneNo IPR availableTMHMMTMhelixcoord: 86..108
NoneNo IPR availableTMHMMTMhelixcoord: 7..25

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig137contigF-serratus_M_contig137:620179..624846 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig137.2729.1mRNA_F-serratus_M_contig137.2729.1Fucus serratus malemRNAF-serratus_M_contig137 620179..624846 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig137.2729.1 ID=prot_F-serratus_M_contig137.2729.1|Name=mRNA_F-serratus_M_contig137.2729.1|organism=Fucus serratus male|type=polypeptide|length=114bp
MKFTAIFLALWAMCASAFIAPSAVVKSRRFVTPEVRSTSSTVAPKTTMNM
GLEQIVDIVPMVPTEAHDQVLEIANNPLLLSLTASSFGGLTGPIAGCTAV
ALLIVVLAPPRVD*
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