mRNA_F-serratus_M_contig137.2721.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig137.2721.1 vs. uniprot
Match: A0A6H5KRM2_9PHAE (NTP_transf_2 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRM2_9PHAE) HSP 1 Score: 148 bits (374), Expect = 5.590e-39 Identity = 87/157 (55.41%), Postives = 103/157 (65.61%), Query Frame = 1
Query: 160 KESWHRRRESHTS----VLSRIHDLADHLRQHAPFIEVVKVLDHAHVPIIKA-VAVDEGGEDGLDGTHGHNAISGRSGKLKLKLKVDISIDGPTHTGLATSAFVCYLAEHLPSLVPLTIIFKSLLQKKGLNDPFTGGLSSYGLVLMVAFALLRRDTF 615
K+ RRR S T +L+RIH+LADHL QH F +KV+ HA VPIIKA G+DG T + +DISIDG +HTGLATSAF YLA+HLP+L PLT++ K LLQ +GLNDPFTGGLSSYGLVLMV FALL+RD F
Sbjct: 118 KDDQPRRRGSRTDSVGGMLTRIHELADHLTQHGTF-SSMKVVPHAMVPIIKARTGALSDGDDGSGDT--------------VSFNIDISIDGQSHTGLATSAFTSYLADHLPNLCPLTMVLKQLLQSRGLNDPFTGGLSSYGLVLMVTFALLQRDHF 259
BLAST of mRNA_F-serratus_M_contig137.2721.1 vs. uniprot
Match: D8LH60_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LH60_ECTSI) HSP 1 Score: 145 bits (366), Expect = 2.460e-36 Identity = 86/157 (54.78%), Postives = 102/157 (64.97%), Query Frame = 1
Query: 160 KESWHRRRESHTS----VLSRIHDLADHLRQHAPFIEVVKVLDHAHVPIIKA-VAVDEGGEDGLDGTHGHNAISGRSGKLKLKLKVDISIDGPTHTGLATSAFVCYLAEHLPSLVPLTIIFKSLLQKKGLNDPFTGGLSSYGLVLMVAFALLRRDTF 615
K+ RRR S T +L+RIH+LADHL QH F +KV+ HA VPIIKA G+DG T + +DISID +HTGLATSAF YLA+HLP+L PLT++ K LLQ +GLNDPFTGGLSSYGLVLMV FALL+RD F
Sbjct: 388 KDDQPRRRGSRTDSVGGMLTRIHELADHLTQHGTF-SSMKVIPHAMVPIIKARTGALSDGDDGSGDT--------------VSFSIDISIDCQSHTGLATSAFTSYLADHLPNLCPLTMVLKQLLQSRGLNDPFTGGLSSYGLVLMVTFALLQRDHF 529
BLAST of mRNA_F-serratus_M_contig137.2721.1 vs. uniprot
Match: A0A7S0CXX3_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A7S0CXX3_9EUKA) HSP 1 Score: 87.8 bits (216), Expect = 1.590e-16 Identity = 53/128 (41.41%), Postives = 72/128 (56.25%), Query Frame = 1
Query: 220 LADHLRQHAPFIEVVKVLDHAHVPIIKAVAVDEGGEDGLDGTHGHNAISGRSGKLKLKLKVDISIDGPTHTGLATSAFVCYLAEHLPSLVPLTIIFKSLLQKKGLNDPFTGGLSSYGLVLMVAFALLR 603
LA HL + +++VVK ++ A VPI+K A SG +++D+S D P+H GL+T AFV L P LVPLT++ K L +GLNDP++GGLSSYGLVLM+ L R
Sbjct: 195 LARHLSKQK-WVQVVKTIERAAVPIVKVTAT-------------FREASG--------IQLDLSFDSPSHRGLSTCAFVRGLCAEFPMLVPLTMVLKQFLVTRGLNDPYSGGLSSYGLVLMLTRVLQR 300
BLAST of mRNA_F-serratus_M_contig137.2721.1 vs. uniprot
Match: A0A2R5GVM8_9STRA (PolyA RNA polymerase cid14 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GVM8_9STRA) HSP 1 Score: 86.7 bits (213), Expect = 6.540e-16 Identity = 57/130 (43.85%), Postives = 74/130 (56.92%), Query Frame = 1
Query: 220 LADHLRQHAPFIEVVKVLDHAHVPIIKAVAVDEGGEDGLDGTHGHNAIS-GRSGKLKLKLKVDISIDGPTHTGLATSAFVCYLAEHLPSLVPLTIIFKSLLQKKGLNDPFTGGLSSYGLVLMVAFALLRR 606
LADHLR + ++++++ ++H VP+IK IS G G L + VDI+ D +HTGL T A V L P L PLT++ K L KGLNDPF GGLSSYGLVLMV A+L+R
Sbjct: 736 LADHLRGQS-WVQMIQSVEHTSVPVIKLATAQI-------------PISFGNQGSL---INVDITFDSYSHTGLRTCALVRRLMASYPPLKPLTLVIKQFLVVKGLNDPFVGGLSSYGLVLMVT-AILQR 847
BLAST of mRNA_F-serratus_M_contig137.2721.1 vs. uniprot
Match: A0A662YKJ9_9STRA (Uncharacterized protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662YKJ9_9STRA) HSP 1 Score: 85.5 bits (210), Expect = 1.590e-15 Identity = 57/162 (35.19%), Postives = 85/162 (52.47%), Query Frame = 1
Query: 220 LADHLRQHAPFIEVVKVLDHAHVPIIKAV---AVDEGGEDGLDGTHGHNAISGRSGKLKLKLKVDISIDGPT---HTGLATSAFVCYLAEHLPSLVPLTIIFKSLLQKKGLNDPFTGGLSSYGLVLMVAFALLRRDTFSATAAAGDTRFDDS---DFDRQQP 678
LADH R + F+EV + A +P++K V AVD +D I+G + +L++ DI+ D P H G+A+ + V LA+ L LT++ K L ++GLNDP+ GGLSSYGL+LMV F L + +T + D + D D +P
Sbjct: 491 LADHFRGSSEFVEV-SAITRASIPLLKVVVVMAVDSAQDD----------ITGENSTAELRIPFDITFDEPNGIRHNGVASVSLVRGLADAFYGLRELTLVLKHFLVERGLNDPYIGGLSSYGLLLMVVFVLQEQGALISTVEGDGSSHDQAYGDDDDEMKP 641
BLAST of mRNA_F-serratus_M_contig137.2721.1 vs. uniprot
Match: A0A5D6XJ51_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XJ51_9STRA) HSP 1 Score: 83.2 bits (204), Expect = 9.760e-15 Identity = 54/144 (37.50%), Postives = 77/144 (53.47%), Query Frame = 1
Query: 220 LADHLRQHAPFIEVVKVLDHAHVPIIKAVAVDEGGEDGLDGTHGHNAISGRSGKLKLKLKVDISID---GPTHTGLATSAFVCYLAEHLPSLVPLTIIFKSLLQKKGLNDPFTGGLSSYGLVLMVAFALLRRDTFSATAAAGDT 642
LA HL F+EV + A +P++K V + GE DG + ++ + R L++ DI+ D GP H G+A++A V L H L L ++ K L K+G+NDP GGLSSYGL+LM+ F L + A AG T
Sbjct: 474 LAAHLAPKPDFVEV-SAITKASIPLLKTVVLLAVGE--CDGDNNSSSSADRV----LRVPFDITFDDPQGPPHNGVASAALVSTLLAHFDGLRELALVLKYFLAKRGVNDPSVGGLSSYGLLLMILFVLQEQGALVAPLDAGGT 610
BLAST of mRNA_F-serratus_M_contig137.2721.1 vs. uniprot
Match: A0A485KJN5_9STRA (Aste57867_8222 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KJN5_9STRA) HSP 1 Score: 83.2 bits (204), Expect = 9.790e-15 Identity = 50/135 (37.04%), Postives = 71/135 (52.59%), Query Frame = 1
Query: 193 TSVLSRIHDLADHLRQHAPFIEVVKVLDHAHVPIIKAVAVDEGGEDGLDGTHGHNAISGRSGKLKLKLKVDISIDGPTHTGLATSAFVCYLAEHLPSLVPLTIIFKSLLQKKGLNDPFTGGLSSYGLVLMVAFAL 597
+S S + +LA LR H P+++ + V+D +P++K AI G + +++DI+ D P H G+ T FV LA LP L PL ++ K LQ LND +TGGLSSYGL L+VA L
Sbjct: 564 SSSSSNMENLAALLR-HEPWVQAIHVIDKTAIPLLKVTT---------------GAIPTSCGDAQGVIQLDITFDRPEHRGVETCVFVQRLAAVLPELTPLVLVLKQFLQHANLNDSYTGGLSSYGLTLLVASIL 682
BLAST of mRNA_F-serratus_M_contig137.2721.1 vs. uniprot
Match: A0A1V9Z488_9STRA (PAP-associated domain-containing protein 5-like n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Z488_9STRA) HSP 1 Score: 82.0 bits (201), Expect = 2.420e-14 Identity = 44/127 (34.65%), Postives = 68/127 (53.54%), Query Frame = 1
Query: 217 DLADHLRQHAPFIEVVKVLDHAHVPIIKAVAVDEGGEDGLDGTHGHNAISGRSGKLKLKLKVDISIDGPTHTGLATSAFVCYLAEHLPSLVPLTIIFKSLLQKKGLNDPFTGGLSSYGLVLMVAFAL 597
+L L +H P+++ ++V++ +P++K A+ G + +++DIS D P H G+ T FV L LP L PL ++ K LL + GLND +TGGLSSYGL +M+A L
Sbjct: 536 ELLASLLRHEPWVQAIQVIERTTIPLVKVTTA---------------AVPTSCGGAQGVIQLDISFDQPQHRGVETCVFVQRLVAVLPELPPLMLVLKQLLLEHGLNDSYTGGLSSYGLTIMLASVL 647
BLAST of mRNA_F-serratus_M_contig137.2721.1 vs. uniprot
Match: A0A3M6VUC9_9STRA (Uncharacterized protein n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VUC9_9STRA) HSP 1 Score: 79.0 bits (193), Expect = 2.720e-13 Identity = 56/166 (33.73%), Postives = 87/166 (52.41%), Query Frame = 1
Query: 211 IHDLADHLRQHAPFIEVVKVLDHAHVPIIKAVAVDEGGEDGLDGTHGHNAISGRSGKLKLKLKVDISIDGPT---HTGLATSAFVCYLAEHLPSLVPLTIIFKSLLQKKGLNDPFTGGLSSYGLVLMVAFALLRRDTFSATAAAGDTRF---DDSDFD---RQQPP 681
+ LA+H R+ + +++V K + A +P++K V D + T+ ++ G G + ++ VDI+ D P H G+A++ V LA L LT++ K L ++GLNDP+ GGLSSYGL+LMV F L + + + DD DFD R PP
Sbjct: 414 VETLAEHFRELSTYVDV-KTITRASIPLLKVVVRVT--VDSVKKTNRNSPEYG--GTVVRQIPVDITFDEPYGIHHNGVASATMVQCLASAFYGLRELTLVLKHFLVERGLNDPYVGGLSSYGLLLMVVFVLQEQGALISMGGGQELAHELVDDDDFDKVKRAAPP 574
BLAST of mRNA_F-serratus_M_contig137.2721.1 vs. uniprot
Match: M4BV53_HYAAE (NTP_transf_2 domain-containing protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BV53_HYAAE) HSP 1 Score: 79.0 bits (193), Expect = 2.770e-13 Identity = 51/129 (39.53%), Postives = 70/129 (54.26%), Query Frame = 1
Query: 220 LADHLRQHAPFIEVVKVLDHAHVPIIKAVAVDEGGEDGLDGTHGHNAISGRSGKLKLKLKVDISIDGPT---HTGLATSAFVCYLAEHLPSLVPLTIIFKSLLQKKGLNDPFTGGLSSYGLVLMVAFAL 597
LADH R+ + F +V + A +P++K V + G D L+ T G + G L++ DI+ D P H G+A+ V LA L LT++ K L K GLNDP GGLSSYGL+LMV + L
Sbjct: 472 LADHFREFSAFSDV-SAITRAPIPLLKVVVLVSG--DNLEATEGKHIE--HDGDAMLRIPFDITFDEPRGIHHNGIASVTLVQGLARAFYGLRELTLVLKCFLVKCGLNDPAVGGLSSYGLLLMVVYVL 595 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig137.2721.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig137.2721.1 >prot_F-serratus_M_contig137.2721.1 ID=prot_F-serratus_M_contig137.2721.1|Name=mRNA_F-serratus_M_contig137.2721.1|organism=Fucus serratus male|type=polypeptide|length=228bp KNHHPPSTNDVNQLKVPDMETASTIRHPSEASIPPSVPSVGHHRNHPSLAback to top mRNA from alignment at F-serratus_M_contig137:509521..511306+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig137.2721.1 ID=mRNA_F-serratus_M_contig137.2721.1|Name=mRNA_F-serratus_M_contig137.2721.1|organism=Fucus serratus male|type=mRNA|length=1786bp|location=Sequence derived from alignment at F-serratus_M_contig137:509521..511306+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig137:509521..511306+ >mRNA_F-serratus_M_contig137.2721.1 ID=mRNA_F-serratus_M_contig137.2721.1|Name=mRNA_F-serratus_M_contig137.2721.1|organism=Fucus serratus male|type=CDS|length=1368bp|location=Sequence derived from alignment at F-serratus_M_contig137:509521..511306+ (Fucus serratus male)back to top |