prot_F-serratus_M_contig1369.2695.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig1369.2695.1
Unique Nameprot_F-serratus_M_contig1369.2695.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length345
Homology
BLAST of mRNA_F-serratus_M_contig1369.2695.1 vs. uniprot
Match: A0A6H5JCD8_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCD8_9PHAE)

HSP 1 Score: 101 bits (251), Expect = 9.300e-20
Identity = 54/143 (37.76%), Postives = 87/143 (60.84%), Query Frame = 0
Query:   39 SDFWIGDSGASCHMPNDPSQMYCMRPPPFEKREVITSNGIRVKIECIGNLDVMFHGRSDESITLIDVAYVPDLKFNLFSFHKAQQTHVIILDAVGAHIMGKNLTFPREKSGSHLRATRL---------VAGTVGARPGTNRAL 172
            S  WIGDS ++ H  +D + +Y  RPP  E+  +   +G ++K EC G+LDV+FH R D  +T+ D+A VPDL F+L S +  Q+TH ++L++ G  I+   + F +  +G++++ATR+         VA TV  RPG  R++
Sbjct:   13 STVWIGDSASTVHATSDGTHVYNTRPPLAEETFLFIGDGRKLKAECFGSLDVVFHCREDVLVTMKDIAVVPDLAFDLVSLNVIQETHDLLLNSAGTWILNGRVHFSKLPTGNYIQATRIAHGASPPAMVAATV--RPGRPRSI 153          
BLAST of mRNA_F-serratus_M_contig1369.2695.1 vs. uniprot
Match: A0A6H5JKS3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKS3_9PHAE)

HSP 1 Score: 68.2 bits (165), Expect = 8.770e-9
Identity = 44/127 (34.65%), Postives = 63/127 (49.61%), Query Frame = 0
Query:  220 PPVGSVLGQIEIGRKPHIESDCFLSAAALNPGMMKDGKVVDINHLHVSLAHAHASVLQATAKQHGFRLKG-QLISCSACSMAKGNRAPTPHHTTARAKRPMELVHIDTAGPFPA-SLGGSRFVVMTQ 344
            P +G +L       +P +++ C   AA + PG  K     D+N  H S  HAH  +L+ TAKQ G  L G  L+SC+ CSMAKG        T  RA + +  V ID  G     S+GG  + ++ +
Sbjct:  181 PQLGKLLSLWGYQTEPEVDTAC---AAIIVPGEAKAATPTDLNEFHNSHGHAHERLLRLTAKQQGVELTGGPLLSCTGCSMAKGQVKAVQRFTDTRAVKKLFRVFIDLGGRMQFHSIGGRWYTLIIR 304          
BLAST of mRNA_F-serratus_M_contig1369.2695.1 vs. uniprot
Match: A0A6H5L175_9PHAE (Uncharacterized protein n=9 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L175_9PHAE)

HSP 1 Score: 68.2 bits (165), Expect = 9.340e-9
Identity = 44/127 (34.65%), Postives = 63/127 (49.61%), Query Frame = 0
Query:  220 PPVGSVLGQIEIGRKPHIESDCFLSAAALNPGMMKDGKVVDINHLHVSLAHAHASVLQATAKQHGFRLKG-QLISCSACSMAKGNRAPTPHHTTARAKRPMELVHIDTAGPFPA-SLGGSRFVVMTQ 344
            P +G +L       +P +++ C   AA + PG  K     D+N  H S  HAH  +L+ TAKQ G  L G  L+SC+ CSMAKG        T  RA + +  V ID  G     S+GG  + ++ +
Sbjct:  663 PQLGKLLSLWGYQTEPEVDTAC---AAIIVPGEAKAATPTDLNEFHNSHGHAHERLLRLTAKQQGVELTGGPLLSCTGCSMAKGQVKAVQRFTDTRAVKKLFRVFIDLGGRMQFHSIGGRWYTLIIR 786          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1369.2695.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5JCD8_9PHAE9.300e-2037.76Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5JKS3_9PHAE8.770e-934.65Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L175_9PHAE9.340e-934.65Uncharacterized protein n=9 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1369contigF-serratus_M_contig1369:176830..177864 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1369.2695.1mRNA_F-serratus_M_contig1369.2695.1Fucus serratus malemRNAF-serratus_M_contig1369 176748..177864 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig1369.2695.1 ID=prot_F-serratus_M_contig1369.2695.1|Name=mRNA_F-serratus_M_contig1369.2695.1|organism=Fucus serratus male|type=polypeptide|length=345bp
MTQFCPPGESVDFRAFVSNNMVYTVPNSAFAVQSYKNRSDFWIGDSGASC
HMPNDPSQMYCMRPPPFEKREVITSNGIRVKIECIGNLDVMFHGRSDESI
TLIDVAYVPDLKFNLFSFHKAQQTHVIILDAVGAHIMGKNLTFPREKSGS
HLRATRLVAGTVGARPGTNRALASQISTPLSSCVPSFPPSVPRSSQISSA
SKISGTDAAHDDLLEPISSPPVGSVLGQIEIGRKPHIESDCFLSAAALNP
GMMKDGKVVDINHLHVSLAHAHASVLQATAKQHGFRLKGQLISCSACSMA
KGNRAPTPHHTTARAKRPMELVHIDTAGPFPASLGGSRFVVMTQ*
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