mRNA_F-serratus_M_contig1364.2673.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig1364.2673.1 vs. uniprot
Match: D7FQW2_ECTSI (Sterol or diacylglycerol O-acyltransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQW2_ECTSI) HSP 1 Score: 329 bits (844), Expect = 3.190e-97 Identity = 250/786 (31.81%), Postives = 336/786 (42.75%), Query Frame = 2
Query: 2 RTAALVALAACSVILSGAVAPSPPWFGVFVCDGDRKASTISDWSDYLGKGLALDLLGRHFEGIASALACISIMIWIVLLVYPLQRL-------APTAASMIGQPLET------------------------PMFSSLAVVIPCALACGVALWAEGLFRWGFASAVAVGLMTANLTLKATSFAKTSC----GLSNAAKIVSASDTPAVGDDLSQ--------------LTFAEFVFFIVAAPSLVCVPRFLRRRARRTPRVTRALCEFFHAALSFLAIHAACSAMFAPTLRVIAAATMAAP-------------------------EHQAEST--------WIDSGGWEALPD----GGGARWFCELMEALGGGQ--AVKDGGMLTCNAA-----PAWLQTTVAAAFGMVFFSPLAHFLMFYGFWHCTCLGCAELWGYPDRLFYGPWWLLSNDLRRYFRAWSTPVHRWLVSCVHTPILSCGINVNNGASGKPGRTANLLPAVKSTNVALAGDISTAFVSTGDDPANSSAALMKGGESPTAAASTKSRGFGVGQTPCGKRGSQDGIGKAGATTSGW---RLFAQVSVFMFSSVVHEAVMFVAMRRTCWPINSVSLMVANVLVAVSDKRSPPKDLIHED---------------------------------------------------------------NKKTEVEV-------------------------GVGSEDAGLMSR-RQVGSEWRRWGALALSESTSFPVPFIIDFFAWQWWRHAHLH 1804
RT AL+ALAACS SGA APS + + ++ + +W+ +L KGLALDLL RHFEGI ALAC+ +M + L YPL L P + GQ P+ S++ V +A+W WG AS ++VGL++A L+LK+ SFA++ C ++ A + A+ P+ G+ S+ LTF EF+FFI+AAPSLVC P FLR+ ARR P RA EF HA L F+A+HAACSA FAP +RV+AAA + P EH + W+D GW GG WF L+ GG + A+ L C A W A+A M+ FSP+ HF+ FYGFWHC CLGCAELWGYPDR FYGPWWLL+ + +R WSTPVHRW+ SC++ P+ + N A +PGR+ LAG T ++ T W RL A S F+FSS+VHEAV FVAMRRTCWP+++ SL+++ +++ D P + +I E ++K+ V V G G + AG +S ++ G EWR WGA+A E S + +DF WQWWRH L+
Sbjct: 41 RTVALLALAACSAKFSGAAAPSADF------ETPAASTVVDEWTAFLTKGLALDLLARHFEGIGKALACMFVMALVATLAYPLHLLITRPPSAVPAGGAGKGQAESERRSPGSQRRQLSSLXXXXXXSPFLPLLSAMVVASTTLPIWTLAVWGSVNLDWGLASGLSVGLLSACLSLKSASFAQSWCCFNAPVTTAKEAAEATGAPSGGETRSREDVCGDGDLAGPPLLTFGEFLFFILAAPSLVCEPEFLRKHARRAPCPGRAFSEFSHAVLVFVALHAACSAFFAPVMRVVAAAVFSTPSPSLVGESAQAALASDFRGCGSGDGEHTCGGSPFNGATIGWVDCVGWAGAEGIHTAGGSGGWFFSLLLDGGGPETAAISYFESLFCGGAGGAGLAGWWGIAAASALAMLVFSPMVHFMAFYGFWHCVCLGCAELWGYPDRNFYGPWWLLAEEPDTMYRLWSTPVHRWVSSCIYRPV----VGHKNAAFSQPGRSGG------GVRRGLAG---------------------------TLCRKSEEXXXXXXXXXXXXXXXXXXXXXXXQTQRRWTWRRLLALTSAFLFSSLVHEAVTFVAMRRTCWPVSTFSLVLSIFVISGWDAMYPVRSIISESAAVSGASGEDSGDRHGTGPPAEQAVLPSSSAATRSQPGATATAADVSCGSTVVETSDGTLEDHSEKSYVVVDQARDLGEQHAITSKNGSDSCGTGGGGGVDGAGRVSNTKKAGREWRGWGAVAFFEGASLVMGLAVDFLMWQWWRHTLLY 783
BLAST of mRNA_F-serratus_M_contig1364.2673.1 vs. uniprot
Match: A0A6H5J9L7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9L7_9PHAE) HSP 1 Score: 313 bits (802), Expect = 4.260e-91 Identity = 249/780 (31.92%), Postives = 328/780 (42.05%), Query Frame = 2
Query: 2 RTAALVALAACSVILSGAVAPSPPWFGVFVCDGDRKASTISDWSDYLGKGLALDLLGRHFEGIASALACISIMIWIVLLVYPLQRL-------APTAASMIGQPLET---------------------PMFSSLAVVIPCALACGVALWAEGLFRWGFASAVAVGLMTANLTLKATSFAKTSCG----LSNAAKIVSASDTPAVG----------DDLSQ---LTFAEFVFFIVAAPSLVCVPRFLRRRARRTPRVTRALCEFFHAALSFLAIHAACSAMFAPTLRVIAAATMAAPE--------HQA----------------EST------------WIDSGGWEALPD----GGGARWFCELMEALGGGQAVKDGGM--LTCNAA-----PAWLQTTVAAAFGMVFFSPLAHFLMFYGFWHCTCLGCAELWGYPDRLFYGPWWLLSNDLRRYFRAWSTPVHRWLVSCVHTPILSCGINVNNGASGKPGRTANLLPAVKSTNVALAGDISTAFVSTGDDPANSSAALMKGGESPTAAASTKSRGFGVGQTPCGKRGSQDGIGKAGATTSGWR-LFAQVSVFMFSSVVHEAVMFVAMRRTCWPINSVSLMVANVLVAVSDKRSPPKDLI-----------------------------------------------------------------HEDNKKTEVEV------------------------GVGSEDAGLMSR-RQVGSEWRRWGALALSESTSFPVPFIIDFFAWQWWRH 1792
RT AL+ALAACS SGA APS + + ++ + DW+ +L KGLALDLL RHFEGI ALAC+ +M + +L YPL L P + GQ P+ S+L V +A+W WG AS ++VGL++A L+LK SFA++ C ++ A + + P G DD + LT EF+FFI+AAPSLVC FLR RARR PR RA EF HA L F+A+HAACSA FAP +RV+A+A + P H+A E T W+D GW G WF L+ GG + L C A W A+A M+ FSP+ HF+ FYGFWHC CLGCAELWGYPDR FYGPWWLL+ + +R WSTPVHRW+ SC++ PI + + A +PG ++ LAG + + E WR L A S F+FSS+VHEAV FVAMRRTCWP+++ SL+++ +++ D P + +I H +N VE G G + AG +S+ ++ GSEWR WGA+A E S + DF WQWWRH
Sbjct: 41 RTVALLALAACSAKFSGAAAPSARF------ETSAASTVVDDWTAFLTKGLALDLLARHFEGIGKALACMFVMALVAILAYPLHLLITRSPSAVPAGGAGTGQAESERCSPGSQRRQLSSLSSSSPFLPLLSALVVASTTLPIWALAVWGSVNLDWGLASGLSVGLLSACLSLKNASFAQSWCRFNAPVTTAKEAAETAGAPGGGARPREEVCRDDDRAGPPLLTLGEFLFFILAAPSLVCEQEFLRERARRAPRPGRAFSEFSHAVLVFVALHAACSAFFAPVMRVLASAVFSPPSPSLAAESAHEALACDFRGGSSGGSGGGEYTCGGLPSIGAMIGWVDCVGWAGAEGIHTAGRSGGWFFSLLLDGGGSETAVASYFESLFCGGAGGAGLAGWWAIAAASALAMLVFSPMVHFMAFYGFWHCVCLGCAELWGYPDRNFYGPWWLLAEEPDTMYRLWSTPVHRWVSSCIYRPI----VGHKSAAIPQPGCSSG------GVRRGLAGT-----------------SCREPEEHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRWTWRRLMALTSAFLFSSLVHEAVTFVAMRRTCWPVSTFSLVLSIFVISGWDAMYPVRSIISESAAVSAASGEDRGGRHGTGPPAEPALWPSSSAATGSQPCATTTATDISCGSRVAETSDGTLEDHSENSYVVVEQARDLGEQHAGTSKNGGDSSCGTGGGGGVDGAGRVSKTKKAGSEWRGWGAVAFFEGASLVMGLAFDFLMWQWWRH 787
BLAST of mRNA_F-serratus_M_contig1364.2673.1 vs. uniprot
Match: D7FQV8_ECTSI (Diacylglycerol O-acyltransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQV8_ECTSI) HSP 1 Score: 251 bits (640), Expect = 1.350e-68 Identity = 228/763 (29.88%), Postives = 306/763 (40.10%), Query Frame = 2
Query: 2 RTAALVALAACSVILSGAVAPSPPWFGVFVCDGDRKASTISDWSDYLGKGLALDLLGRHFEGIASALACISIMIWIVLLVYPLQRLAPTAASMIGQPLETPMFSSLAVVIPCALACGVALWAEGLFR-----WGFASAVAVGLMTANLTLKATSFAKTSCGLSNAAKIVSA-------------------------------------------SDTP---AVGDD------LSQLTFAEFVFFIVAAPSLVCVPRFLRRRARRTPRVTRALCEFFHAALSFLAIHAACSAMFAPTLRVIAAATMAAPEHQAESTWIDSGGWEALPDGGGARWFCE-------LMEALGGGQAVKDGGMLTCNAAPAW-----------LQTTVAAAFGMVFFSPLAHFLMFYGFWHCTCLGCAELWGYPDRLFYGPWWLLSNDLRRYFRAWSTPVHRWLVSCVHTPILSCGINVNNGASGKPGRTANLLPAVKSTNVALAGDISTAFVSTGDDPANSSAALMKGGESPTAAASTKSRGFGVGQTPCGK--RGSQDGIGKAGATTSGWRLFAQVSVFMFSSVVHEAVMFVAMRRTCWPINSVSLMVA--------NVLVAVSDKRSP-------------------------------------------------------------------------PKDLIHEDNKKTEVEVGVGSEDAGLMSRRQ-----VGSEWRRWGALALSESTSFPVPFIIDFFAWQWWRHAHL 1801
RT+AL+ + A S+ SGA DG +S+ ++W YL KG+ L LL +HF G+ SAL C+ + LVYP+ + AA + L SS A +A+W WG AS + VGL A LTLK+ SF + + ++ A I A S++P A GDD LTF EF FF+V APSLVC P++L+ ARR PRV A EF HA L+++A+H ACSA+FAP LRV+A A + + W D W L G+ W+ + A GGG V GG + C P W L +AA G+ FSP+ HFLMFY F+H CLGCAEL+GYPDR YGPWWL+ +D+R YFR WS PVHRWL V P++ G + R A +TN G S + R G T GK G+ GI + W L + V F+ S VVHEAV FVAMRRT WP ++ L V + V+D +P KD+ + K V G +A + R++ +G R W A+ + P+ ++D+ WQWWRH H+
Sbjct: 37 RTSALLVVVAMSIAASGA-------------DGSGGSSSSAEWGVYLAKGMHLALLQKHFGGMVSALGCMVMGTVTSFLVYPIYQRCSPAAIQNPRALPCRRVSSTTAKTIAAAVPSMAVWXXXXXXXXXXXWGIASGLCVGLQCAALTLKSVSFVQKARPVAAEAAIAVAAAHEDLDAAGVAENADEGDRAAAASGKLAISPARRSVLQRDPRSNSPSSTANGDDGCAHAANPALTFREFAFFLVLAPSLVCRPQYLKSGARRPPRVAAAASEFLHAGLTYVAVHVACSALFAPALRVLAEALHSG----GVAGWADEEDWAELRRTDGSGWWLHDSSRSIGSLFASGGGSCV--GGGVGC--VPGWTFADDGTGHPGLTVAIAACLGVFVFSPMMHFLMFYAFFHSVCLGCAELYGYPDRNTYGPWWLVVDDVRDYFRLWSAPVHRWLSESVQRPMIEVG--QREALRHRRRRVAREEDKPPATN----------------------------GNSGGSNGVHDYRPKGTSSTTGGKARHGADAGI------VTRWWLASVVCSFLVSGVVHEAVGFVAMRRTVWPFSTFFLAVTASMAPFWDTLFPVVADTSTPGTRPTGRRAFTSIAAAGGDGVGFSAETEAANSAAVPRTAXXXXXXXXXXXXXXXXXXXXXXXXAADGQHAGHPSKDVAN----KNGVVTGQQGSEAPRLGRKEPLRPKIGRR-RGWAAVVVYGGMYMPLTLVVDYCVWQWWRHTHM 737
BLAST of mRNA_F-serratus_M_contig1364.2673.1 vs. uniprot
Match: D7FUK9_ECTSI (Sterol or diacylglycerol O-acyltransferase, partial n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FUK9_ECTSI) HSP 1 Score: 234 bits (597), Expect = 2.280e-64 Identity = 187/602 (31.06%), Postives = 255/602 (42.36%), Query Frame = 2
Query: 122 SDWSDYLGKGLALDLLGRHFEGIASALACISIMIWIVLLVYPLQRL------------APTAASMI---GQPLETPMFSSLAVVIPCALACGVALWAEGLFRWGFASAVAVGLMTANLTLKATSFAKTSCGLSNAAKIVSASDTPAVGDDLS-----------QLTFAEFVFFIVAAPSLVCVPRFLRRRARRTPRVTRALCEFFHAALSFLAIHAACSAMFAPTLRVIAAATMAAPEHQAESTWID--SGGWEALPDGGGARW--FCELMEALGGGQAVKDG---GMLTCNAAPAWLQTTVAAAFGMVFFSPLAHFLMFYGFWHCTCLGCAELWGYPDRLFYGPWWLLSNDLRRYFRAWSTPVHRWLVSCVHTPILSCGINVNNGASGKPGRTANLLPAVKSTNVALAGDISTAFVSTGDDPANSSAALMKGGESPTAAASTKSRGFGVGQTPCGKRGSQDGIGKAGATTSGWRLF-AQVSVFMFSSVVHEAVMFVAMRRTCWPINSVSLMVANVLVAVSDKRSPPKDLIHEDNKKTEVEVGVGSEDAGLMSRRQVGSEW---RRWGALALSESTSFPVP-----FIIDFFAWQWWRHAHL 1801
++W D+ + +A+D L HFEG+ + A + ++ I +LVYPL L TAA G+P+ T + AV +P A A+WA+ WG + + L A +TLK TSF S + LTF E++FF+ +PSLVC R ++ ARR R RA EFFHA L+FL H ++ AP+LR+ +A W++ + GW L GGA W + L GG G G L W+ V++A HF++FY FWHC CLG AELWG+PDR YG WWLL ++ R + R WSTPVHRWL +CVH P+L + G G T + ++STA DP S W A ++ F+ S V HEAV+++AMR TCWP N+ L V VLV D P DL +E E G + A L R + G+ R +G + +F V FI D AW WWRH H+
Sbjct: 18 AEWLDFAFRSMAIDRLVHHFEGMGTGFAAMGVVASISILVYPLHSLLSPRTTPATTDNTATAAPSSDGGGRPVGTYV---AAVGLPSAAVWAFAVWAQRRAAWGLVPGLWLALFCACVTLKITSFVAASAVATPPXXXXXXXXXXXXXXXXXXXXXXXXAGPRSLTFGEYLFFLFLSPSLVCEVRLMKVSARRRSRPLRAASEFFHAVLTFLCAHCVVGSILAPSLRLFFSAV--------SPGWVEGAAAGWAELEAAGGAGWPSWTAGSALLAGGDKEDSGTRLGQLVALGCFLWMLFVVSSAL---------HFMVFYAFWHCICLGMAELWGFPDRNLYGCWWLLFDEPRDFLRMWSTPVHRWLSTCVHWPMLELCSTSDEGVDG--------------TKSPPSAELSTATAEVAGDP------------------------------------------------SKWTWVPAVLATFVVSGVFHEAVVYIAMRGTCWPFNTFLLCVGGVLVIFWDIVFPLPDL----KPSSESEGGSPPQTATLSPRNEGGAGKKVVRAYGHRGRMSAAAFCVSVQLSAFIADCAAWLWWRHIHM 533
BLAST of mRNA_F-serratus_M_contig1364.2673.1 vs. uniprot
Match: A0A6H5KXI3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXI3_9PHAE) HSP 1 Score: 217 bits (553), Expect = 4.510e-58 Identity = 168/491 (34.22%), Postives = 223/491 (45.42%), Query Frame = 2
Query: 2 RTAALVALAACSVILSGAVAPSPPWFGVFVCDGDRKASTISDWSDYLGKGLALDLLGRHFEGIASALACISIMIWIVLLVYPL-QRLAPTAASMIGQPLETPMFSSLAVVIPCALACGVALWAEGLFR-----WGFASAVAVGLMTANLTLKATSF------------------------AKTSCGLSNAAKIVSASDTPAV----------------------GDDLSQ------LTFAEFVFFIVAAPSLVCVPRFLRRRARRTPRVTRALCEFFHAALSFLAIHAACSAMFAPTLRVIAAATMAAPEHQAESTWIDSGGWEALPDGGGARWFCE-------LMEALGGGQAVKDGGMLTCNAAPAW-----------LQTTVAAAFGMVFFSPLAHFLMFYGFWHCTCLGCAELWGYPDRLFYG----------------------------PWWLLSNDLRRYFRAWSTPVHRWLVSCVHTPILSCG 1162
RT+AL+ + A S+ SG DG ++++ ++W YL KG+ L LL +HFEGI SAL C+++ LVYP+ QR +P A P + S+ A I A+ +A+WA WG AS + VGL A LTLK+ SF A+ + + + +AS A+ GDD LTF EF FF+ APSLVC P++L ARR PRV A EF HA L+++A+H ACSA+FAP LRV+A + + W D W L G+ W+ + A GGG V G + C P W L +AA G+ FSP+ HFLMFY F+H CLGCAEL+GYPDR YG PWWL+ +D+R YFR WS PVHRWL V P++ G
Sbjct: 37 RTSALLVVVAMSIAASGG-------------DGSGRSNS-AEWGVYLAKGMHLTLLQKHFEGIVSALGCMAMGTVTSFLVYPIYQRCSPAAIQNPRAPPCRRVSSATAKTIAAAVP-SMAVWAXXXXXXXXXXWGVASGLCVGLQCAALTLKSVSFVQKARPVAAEAAIAVVAAHEDLDAARVAANADDGDRAAAASGQLAISPARRSVLQGDPRSNPPSPTANGDDGGARAANPALTFREFAFFLALAPSLVCQPQYLASGARRPPRVAAAASEFLHAGLTYIAVHVACSALFAPALRVLAGVLHSG----GVAGWADEEDWAELRRTDGSGWWLYDSSGSLGSLFASGGGGCVHGG--VGCG--PGWTFSDDGTGHPGLTVAIAACLGVFVFSPMMHFLMFYAFFHSVCLGCAELYGYPDRNTYGELSFSLVGDRFTPSAGLEGQALRHDSAGPWWLVVDDVRDYFRLWSAPVHRWLSESVQRPMIEVG 504 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1364.2673.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 5
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig1364.2673.1 >prot_F-serratus_M_contig1364.2673.1 ID=prot_F-serratus_M_contig1364.2673.1|Name=mRNA_F-serratus_M_contig1364.2673.1|organism=Fucus serratus male|type=polypeptide|length=532bp MIWIVLLVYPLQRLAPTAASMIGQPLETPMFSSLAVVIPCALACGVALWAback to top mRNA from alignment at F-serratus_M_contig1364:96832..99762+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig1364.2673.1 ID=mRNA_F-serratus_M_contig1364.2673.1|Name=mRNA_F-serratus_M_contig1364.2673.1|organism=Fucus serratus male|type=mRNA|length=2931bp|location=Sequence derived from alignment at F-serratus_M_contig1364:96832..99762+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig1364:96832..99762+ >mRNA_F-serratus_M_contig1364.2673.1 ID=mRNA_F-serratus_M_contig1364.2673.1|Name=mRNA_F-serratus_M_contig1364.2673.1|organism=Fucus serratus male|type=CDS|length=3192bp|location=Sequence derived from alignment at F-serratus_M_contig1364:96832..99762+ (Fucus serratus male)back to top |