mRNA_F-serratus_M_contig1363.2669.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig1363.2669.1 vs. uniprot
Match: D7FQG8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQG8_ECTSI) HSP 1 Score: 449 bits (1156), Expect = 5.460e-135 Identity = 265/512 (51.76%), Postives = 319/512 (62.30%), Query Frame = 2
Query: 521 PHPRRWSEEEDERLRTAVEKHDGMNWKEIAAEVKTRNHVQCLQRWKKVLTPGLVKGQWSREEDDLLTKLVGEGHKNWGALAARIPGRTSKQCRERWCHHLDPRIVKGEWTEEEDRTLVAMHEEIGNKWATIAQHLNGRTENATKIRWKILERSMRNGKHLALDKTSKLSRGNPARHST-DSRMRCLAAQAAASAMSKAKQAVNAINPIGMPENPTVVQGLLEQNFGDVDLSRKLPFATNRIGNSERPFVSRNVCRGVRTACPTATKPASSATSSSNGSNERGYDNTAKQQXXXQPAGKDRDTKKRKMTGGYLQ--PSSTVGGATMAVSDSKAFGLLIGDEGGDGGGLGQGEGHSGRRGWLPDEDARLRQAVEKYGDRNWRHVAQNVGTRTHIQCQQRWKKALRPGLIKGAWSLEEDENLVTLIGEGFPNWSELAAHTPGRTAKQCRERWCHHLDPSVNHGSWTEEEDILLCSLETRLGTKWAAIAREMQGRTEHAVKGRFKTLMREKRVFDA 2047
PHPRRWS EEDERLR AVE++ G NWKEIAAEVKTRNHVQCLQRWKKVLTPGLVKGQW+ EED LL +V EGHKNWG+L+ARIPGRTSKQCRERWCHHLDPRIVKG WTE ED+ ++ + +++GNKWA IAQHL+GRTENATKIRWKILER M+ + DK + SRG +R D+R+RCLAAQAA SA+SK + +++ P+G+P+ FG D A K ASS T + + G Q G + K ++ G +Q P+ST AV +GGG + H+GRR WL +ED RL++AVE+ G++NWR VA +V TR HIQCQQRWKKALRPGL+KGAW +EED+ LV LI +GF NWSELA++T GRTAK +E RLGTKWAAIARE+ GRTEHAVKGRFKTL REKR+ A
Sbjct: 15 PHPRRWSLEEDERLRAAVERYHGTNWKEIAAEVKTRNHVQCLQRWKKVLTPGLVKGQWTPEEDQLLVSIVNEGHKNWGSLSARIPGRTSKQCRERWCHHLDPRIVKGGWTEAEDQMIILLQQQMGNKWAQIAQHLDGRTENATKIRWKILEREMKKEEERHEDKETS-SRGASSRPKRPDARLRCLAAQAATSALSKTQ---SSLGPVGVPKG-----------FGAAD----------------------------------APKAASSITIGAPAAGRGG-----------QKGGGNTSNSKEEIPGRRIQAPPAST------AV---------------EGGGSDK---HAGRRAWLSEEDKRLKEAVEELGEKNWREVADHVRTRNHIQCQQRWKKALRPGLVKGAWGVEEDKKLVMLIEQGFSNWSELASNT-GRTAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVEARLGTKWAAIAREIPGRTEHAVKGRFKTLSREKRLGKA 441
BLAST of mRNA_F-serratus_M_contig1363.2669.1 vs. uniprot
Match: A0A6H5K458_9PHAE (MYB protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K458_9PHAE) HSP 1 Score: 384 bits (985), Expect = 2.490e-115 Identity = 227/452 (50.22%), Postives = 278/452 (61.50%), Query Frame = 2
Query: 506 DKSEHPHPRRWSEEEDERLRTAVEKHDGMNWKEIAAEVKTRNHVQCLQRWKKVLTPGLVKGQWSREEDDLLTKLVGEGHKNWGALAARIPGRTSKQCRERWCHHLDPRIVKGEWTEEEDRTLVAMHEEIGNKWATIAQHLNGRTENATKIRWKILERSMRNGKHLALDKTSKLSRGNPARHST-DSRMRCLAAQAAASAMSKAKQAVNAINPIGMPENPTVVQGLLEQNFGDVDLSRKLPFATNRIGNSERPFVSRNVCRGVRTACPTATKPASSATSSSNGSNERGYDNTAKQQXXXQPAGKDRDTKKRKMTGGYLQPSSTVGGATMAVSDSKAFGLLIGDEGGDGGGLGQGEGHSGRRGWLPDEDARLRQ------AVEKYGDRNWRHVAQNVGTRTHIQCQQRWKKALRPGLIKGAWSLEEDENLVTLIGEGFPNWSELAAHTPGRTAK 1840
D+ + PHPRRWS EEDERLR AVE++ G +WKEIAAEVKTRNHVQCLQRWKKVLTPGLVKGQW+ EED LL +V EGHKNWG+L+AR+PGRTSKQCRERWCHHLDPRIVKG WTEEED+ +V++ +++GNKWA IAQHL+GRTENATKIRWKILER M+ + + DK + SRG +R D+R+RCL +QAA SA+SK + R G++ P KP ++G NT+ K + G +Q V A+ AV +GGG+ + H+GRR WL DED RL++ AVE+ G++NWR VA +V TR HIQCQQRWKKALRPGL+KGAW +EED+ LV LIG+GF NWSELAA+T GRTAK
Sbjct: 61 DQDQGPHPRRWSPEEDERLRAAVERYHGTSWKEIAAEVKTRNHVQCLQRWKKVLTPGLVKGQWTPEEDKLLVSIVNEGHKNWGSLSARVPGRTSKQCRERWCHHLDPRIVKGGWTEEEDQIIVSLQQQMGNKWAKIAQHLDGRTENATKIRWKILERGMKKEEEMHEDKETS-SRGASSRPKRPDARLRCLDSQAATSALSKTQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPPRARP------GMQIPPP---KPVYKG-------GQKGGGNTS--------------NSKEERPGRRIQ----VPPASTAV---------------EGGGIDK---HAGRRAWLSDEDKRLKEVGVEKGAVEELGEKNWRQVADHVRTRNHIQCQQRWKKALRPGLVKGAWGVEEDKKLVMLIGQGFNNWSELAANT-GRTAK 458
BLAST of mRNA_F-serratus_M_contig1363.2669.1 vs. uniprot
Match: A0A7S2UU49_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UU49_9STRA) HSP 1 Score: 231 bits (588), Expect = 1.790e-63 Identity = 124/223 (55.61%), Postives = 154/223 (69.06%), Query Frame = 2
Query: 527 PRRWSEEEDERLRTAVEKHDGMNWKEIAAEVKTRNHVQCLQRWKKVLTPGLVKGQWSREEDDLLTKLVGEGHKNWGALAARIPGRTSKQCRERWCHHLDPRIVKGEWTEEEDRTLVAMHEEIGNKWATIAQHLNGRTENATKIRWKILERSMRNGKHLALDKTSKLSRGNPARHSTDSRMRCLAAQAAASAMSKAKQAVNAIN--PIGMPENPTVVQGLLEQN 1189
PR+W+ EDE LR AV K+ NWK+IA EV TRNHVQCLQRWKKVL PGLVKGQWS ED L LVG+G KNWG LAA++PGRTSKQCRERW HHLDP + KGE+T EED T++ + E+GNKW+ IA+HL GRTENA KIRWK L+R +R + SR +P DS ++ LAAQAA +A++KA+ P G P +P +V + E++
Sbjct: 27 PRKWTLVEDEELRHAVRKYGESNWKDIAREVGTRNHVQCLQRWKKVLKPGLVKGQWSALEDAKLVDLVGKGFKNWGQLAAQMPGRTSKQCRERWSHHLDPSVKKGEYTTEEDNTILRLQSELGNKWSEIAKHLPGRTENAVKIRWKALDR-LRQNAGSGRGQAQIRSRNHP-----DSHLKVLAAQAAVAAIAKAQLHCGQEGGLPAGYPRDPDLVTKIHEEH 243
BLAST of mRNA_F-serratus_M_contig1363.2669.1 vs. uniprot
Match: A0A484EAX8_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484EAX8_BRELC) HSP 1 Score: 243 bits (619), Expect = 4.270e-62 Identity = 195/628 (31.05%), Postives = 285/628 (45.38%), Query Frame = 2
Query: 530 RRWSEEEDERLRTAVEKHDGMNWKEIAAEVKTRNHVQCLQRWKKVLTPGLVKGQWSREEDDLLTKLVGEGHKNWGALAARIPGRTSKQCRERWCHHLDPRIVK--GEWTEEEDRTLVAMHEEIGNKWATIAQHLNGRTENATKIRWKILE-RSMRNGKH--------LALDKTSKLSRGNPAR------HST--------------------DSRMRC----LAAQAAASAMSKAKQAVNAINPIGMPENPTVVQGLLEQNFGDVDLSRKL----------PFATNRIGNS-------------------------------------------------ERPFVSRNVCRGVRTACPTATKPASSATSSSNGSNERG------------YDNTAKQQXXXQPAGKDRDTKK---RKMTGGYLQPSSTVGGATMAVSDSKAFGLL-------IGDEGGDGGGLG---------QGEGHSGRRGWLPDEDARLRQAVEKYGDRNWRHVAQNVGTRTHIQCQQRWKKALRPGLIKGAWSLEEDENLVTLIGEGFPNWSELAAHTPGRTAKQCRERWCHHLDPSVNHGSWTEEEDILLCSLETRLGTKWAAIAREMQGRTEHAVKGRFKTL 2020
+RW+ E+DE LR AV+++ NWK IA++V RNH QCLQRW KVL PGLVKG WS EED L ++V +G +W +A IPGRT+KQCRERW +HLDP I K G +T EEDR + +++GN+W IA+ L GRTE+A K+RWK L M K +A +K ++ P H++ D+R+ L++Q A + Q + + P + + E DV + ++L F + R NS + P + + + + + ++ +N + G Y + Q DRD + R+ + G L +G T + D L+ I D + +G G +R W P++DA L++AV + G RNW VA+ V R + QC QRW K L+PGL+KG WS+EED L+ L+ +G+ NW +++ + PGRTAKQCRERW + LDPS+N + E+ED + + G +W IA + GRTE AVK R+K L
Sbjct: 64 KRWTFEQDEALRKAVDEYGQRNWKAIASQVTGRNHAQCLQRWNKVLKPGLVKGHWSFEEDSTLEQIVLQGCYSWSKVADHIPGRTAKQCRERWRNHLDPSINKSYGPFTCEEDRIIQMGFDDLGNRWTQIAELLPGRTEDAVKLRWKALNPNEMVKAKPGRPKLLPGMATNKQRSIALPTPIDVAASFVHTSPMMMPEIPTFDEKYEVSVPIDNRLSIQPMLLSSQVAEGDLVATNQPLLRNQYVEPLMKPLSEELMAESELDDVAMLKELLHSHSNSLLISFGSTRGFNSLTDISPEELLASGELDEMFHATMSISKERTDQSRLLSSSTWMDTLTDSFKTPELLQKAVKNLNQQDQHLFREITAQKGMTNALSIEGDCIAPLPVEPVAYSHYKVDTSRSQKLSLDRDKTRSLPRQNSNGILYE---LGHITNDIDDLLNSDLMRPIRKGKISKRERDAVNVDAHVDKTLKKKGGGTVSKR-WTPEQDAALKEAVAELGHRNWMAVAERVPERDNAQCLQRWNKVLKPGLVKGPWSVEEDAMLMELMLKGYDNWRQISNNIPGRTAKQCRERWRNRLDPSINKSPFKEDEDQAILQAYEKYGNRWTQIAELLPGRTEDAVKLRWKAL 687
BLAST of mRNA_F-serratus_M_contig1363.2669.1 vs. uniprot
Match: H3G911_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3G911_PHYRM) HSP 1 Score: 203 bits (517), Expect = 1.640e-56 Identity = 95/148 (64.19%), Postives = 112/148 (75.68%), Query Frame = 2
Query: 527 PRRWSEEEDERLRTAVEKHDGMNWKEIAAEVKTRNHVQCLQRWKKVLTPGLVKGQWSREEDDLLTKLVGEGHKNWGALAARIPGRTSKQCRERWCHHLDPRIVKGEWTEEEDRTLVAMHEEIGNKWATIAQHLNGRTENATKIRWKIL 970
P+RW+ EEDE+LR AV +H NWK IA EV RNH QCLQRW KVL PGLVKG W +EDDLL +LV EG KNWG +A RIPGRTSKQCRERW +HLDP IV+GE++ EEDR ++ +GN+W+ IA L GRTE+A KIRWK L
Sbjct: 9 PKRWTPEEDEKLREAVNRHGERNWKSIAEEVPGRNHTQCLQRWTKVLAPGLVKGHWRPDEDDLLKELVAEGRKNWGQVATRIPGRTSKQCRERWYNHLDPSIVRGEYSAEEDRMILDAQARLGNRWSAIAAMLPGRTEDAVKIRWKSL 156
BLAST of mRNA_F-serratus_M_contig1363.2669.1 vs. uniprot
Match: D0NJN5_PHYIT (Myb-like DNA-binding protein, putative n=2 Tax=Phytophthora TaxID=4783 RepID=D0NJN5_PHYIT) HSP 1 Score: 204 bits (518), Expect = 1.330e-55 Identity = 110/218 (50.46%), Postives = 131/218 (60.09%), Query Frame = 2
Query: 344 VDRLPLQGEKR---------LKTEEMNGGEENRLLTMAMVESDGEDDCDWRDATTITDAHDAHDKSEHPHPRRWSEEEDERLRTAVEKHDGMNWKEIAAEVKTRNHVQCLQRWKKVLTPGLVKGQWSREEDDLLTKLVGEGHKNWGALAARIPGRTSKQCRERWCHHLDPRIVKGEWTEEEDRTLVAMHEEIGNKWATIAQHLNGRTENATKIRWKIL 970
VD P++G+ R L TE G N E G D TI D P+RW+ EED++LR AV +H NWK IA EV RNH QCLQRW KVL PGLVKG W EEDDLL +LV EG KNWG +A RIPGRTSKQCRERW +HLDP I++GE++ EEDR ++ +GN+W+ IA L GRTE+A KIRWK L
Sbjct: 18 VDGFPIEGDGRSSISDFGKLLFTEGQANGSSNAANKRVFTEIKGIPRQKQHDVRTIMKTKDK------AVPKRWTPEEDDKLREAVGRHGERNWKSIAEEVPGRNHTQCLQRWTKVLAPGLVKGHWRPEEDDLLKELVAEGRKNWGQVATRIPGRTSKQCRERWYNHLDPSIIRGEYSPEEDRMILDAQARLGNRWSAIAAMLPGRTEDAVKIRWKSL 229
BLAST of mRNA_F-serratus_M_contig1363.2669.1 vs. uniprot
Match: A0A2P4Y3D9_9STRA (Myb-like DNA-binding protein (Fragment) n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4Y3D9_9STRA) HSP 1 Score: 205 bits (521), Expect = 6.330e-55 Identity = 100/170 (58.82%), Postives = 123/170 (72.35%), Query Frame = 2
Query: 527 PRRWSEEEDERLRTAVEKHDGMNWKEIAAEVKTRNHVQCLQRWKKVLTPGLVKGQWSREEDDLLTKLVGEGHKNWGALAARIPGRTSKQCRERWCHHLDPRIVKGEWTEEEDRTLVAMHEEIGNKWATIAQHLNGRTENATKIRWKILERSMRN-GKHLALDKTSKLSRG 1033
P+RW++EED++LR AV +H NWK IA EV RNH QCLQRW KVL PGLVKG W +ED+LL +LV EG KNWG +A RIPGRTSKQCRERW +HLDP IV+GE+T+EEDR ++ +GN+W+ IA L GRTE+A KIRWK L R + G+ DK S+G
Sbjct: 91 PKRWTQEEDDKLREAVGRHGERNWKSIAEEVPGRNHTQCLQRWTKVLAPGLVKGHWRPDEDELLKELVAEGRKNWGQVATRIPGRTSKQCRERWYNHLDPSIVRGEYTQEEDRMILDAQARLGNRWSAIAAMLPGRTEDAVKIRWKSLCRVRKGQGRRGQADKGKMTSKG 260
BLAST of mRNA_F-serratus_M_contig1363.2669.1 vs. uniprot
Match: A0A3M6VKU0_9STRA (Uncharacterized protein n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VKU0_9STRA) HSP 1 Score: 197 bits (502), Expect = 2.530e-53 Identity = 91/148 (61.49%), Postives = 111/148 (75.00%), Query Frame = 2
Query: 527 PRRWSEEEDERLRTAVEKHDGMNWKEIAAEVKTRNHVQCLQRWKKVLTPGLVKGQWSREEDDLLTKLVGEGHKNWGALAARIPGRTSKQCRERWCHHLDPRIVKGEWTEEEDRTLVAMHEEIGNKWATIAQHLNGRTENATKIRWKIL 970
P+RW+ EDE+LR AV +H NWK IA EV RNH QCLQRW KVL PGLVKG W +ED+LL +LV EG KNWG +A RIPGRTSKQCRERW +HLDP I++GE+++ EDR ++ +GN+W+ IA L GRTE+A KIRWK L
Sbjct: 99 PKRWTPTEDEKLRDAVGRHGERNWKSIAEEVPGRNHTQCLQRWTKVLAPGLVKGHWRPDEDELLKELVAEGRKNWGQVATRIPGRTSKQCRERWYNHLDPSIIRGEYSQAEDRMILDAQSRLGNRWSAIAAMLPGRTEDAVKIRWKSL 246
BLAST of mRNA_F-serratus_M_contig1363.2669.1 vs. uniprot
Match: A0A418B0H6_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A418B0H6_9STRA) HSP 1 Score: 206 bits (524), Expect = 4.670e-53 Identity = 105/178 (58.99%), Postives = 127/178 (71.35%), Query Frame = 2
Query: 461 DWRDATTITDAHDAHDKSEHPHPRRWSEEEDERLRTAVEKHDGMNWKEIAAEVKTRNHVQCLQRWKKVLTPGLVKGQWSREEDDLLTKLVGEGHKNWGALAARIPGRTSKQCRERWCHHLDPRIVKGEWTEEEDRTLVAMHEEIGNKWATIAQHLNGRTENATKIRWKILERSMRNGK 994
D A TI+ A DKS +PRRWS+ EDE LR AVE+ NWK IA +V RNH QCLQRW KVL PGL+KG W+ EED L LV EG KNWG +A+ IPGRTSKQCRERWC+HLDP I KG +T EED+ +V M ++GN+W+ IAQ L+GRTE+A KIRWK L R+ R+ +
Sbjct: 90 DHAPAVTISSARGG-DKS---NPRRWSKAEDESLRLAVERSGERNWKAIADQVAGRNHTQCLQRWTKVLKPGLIKGHWTPEEDAKLRTLVAEGRKNWGQVASHIPGRTSKQCRERWCNHLDPNINKGNYTREEDQLIVDMQAKLGNRWSVIAQQLSGRTEDAVKIRWKSLMRTRRSSR 263
BLAST of mRNA_F-serratus_M_contig1363.2669.1 vs. uniprot
Match: A0A662WMC1_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WMC1_9STRA) HSP 1 Score: 195 bits (495), Expect = 7.090e-53 Identity = 96/158 (60.76%), Postives = 113/158 (71.52%), Query Frame = 2
Query: 527 PRRWSEEEDERLRTAVEKHDGMNWKEIAAEVKTRNHVQCLQRWKKVLTPGLVKGQWSREEDDLLTKLVGEGHKNWGALAARIPGRTSKQCRERWCHHLDPRIVKGEWTEEEDRTLVAMHEEIGNKWATIAQHLNGRTENATKIRWKILERSMRNGKHL 1000
PRRW+ EDE LR+AVE H NWK IAA V RNH QCLQRW KVL PGLVKG WS ED+LL +LV KNWG +AA+IPGRTSKQCRERW +HLDP IV+G ++ EEDR ++ +GN+W+ IA L GRTE+A KIRWK R R K+L
Sbjct: 5 PRRWTAAEDEALRSAVESHREKNWKAIAAHVAGRNHTQCLQRWTKVLAPGLVKGHWSPHEDELLRRLVAADQKNWGDVAAKIPGRTSKQCRERWHNHLDPAIVRGAYSPEEDRLILEAQARLGNRWSVIAAMLPGRTEDAVKIRWKSHCRVWRARKYL 162 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1363.2669.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig1363.2669.1 >prot_F-serratus_M_contig1363.2669.1 ID=prot_F-serratus_M_contig1363.2669.1|Name=mRNA_F-serratus_M_contig1363.2669.1|organism=Fucus serratus male|type=polypeptide|length=837bp MASTWRAASVDRLPLQGEKRLKTEEMNGGEENRLLTMAMVESDGEDDCDWback to top mRNA from alignment at F-serratus_M_contig1363:42401..83191- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig1363.2669.1 ID=mRNA_F-serratus_M_contig1363.2669.1|Name=mRNA_F-serratus_M_contig1363.2669.1|organism=Fucus serratus male|type=mRNA|length=40791bp|location=Sequence derived from alignment at F-serratus_M_contig1363:42401..83191- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig1363:42401..83191- >mRNA_F-serratus_M_contig1363.2669.1 ID=mRNA_F-serratus_M_contig1363.2669.1|Name=mRNA_F-serratus_M_contig1363.2669.1|organism=Fucus serratus male|type=CDS|length=5022bp|location=Sequence derived from alignment at F-serratus_M_contig1363:42401..83191- (Fucus serratus male)back to top |