prot_F-serratus_M_contig102.263.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig102.263.1
Unique Nameprot_F-serratus_M_contig102.263.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length578
Homology
BLAST of mRNA_F-serratus_M_contig102.263.1 vs. uniprot
Match: D8LU32_ECTSI (DEAD box helicase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LU32_ECTSI)

HSP 1 Score: 301 bits (772), Expect = 3.250e-87
Identity = 220/516 (42.64%), Postives = 289/516 (56.01%), Query Frame = 0
Query:    1 VGAVKCCPPFSTNRLIFFQHKALLTNGSRISSWKSAREQGLEKLKLIQPSKEDGKRQFTPQKRPPLIRSVEDNEGVEASARGDGLITTR--PRSYQTEVFQSVVKSSRNSLVYLPSGLGETLVAAMVLKTLMDLNAERQAYFVVENGAEAMQQAQKLQKDLRCTV---EVMVGSSLGFEALGGEDSGKGGDGSSSGDACDLRCQQKLLDLREARLVVATAGALEHAMCKRYIDPDSICCVVFLLQETYRRNKVCSRDSPLDRLANAFF----LPRVRAVNAPACETASVSKLPKLVALMASPPQVARSSLTPTEAVTVAETVTMVEELLDKFKADLAAPVKTLQEVKDRTAGVELEVVKVKVMATPEESLLLRCLAKLVLRRIIKAAP-GSDSAVEAKKLLHRYNDRGGGNEMAQL-----------QDGVWTFPGQSYVGLCQQALKVSSRRRAETEIKAAEGGGGAEMGGGELSSGDDRKTEDEYHLIDLMNLAYAVDEIGGERTLRKLLNMLE 495
            VG VKC PP S N+LIFFQ KALL +     SWK+ RE  L K+KL+   KE+ +RQFTP++ P L +S+      +    G G+  TR  PR YQ E+F +V++  RNSLVYLP+GLG+TLVAAMVLK ++D N ERQAYF+VE  A AMQQ  +LQ +L  TV   E++VGSSL  +A GG+  GK   G        L C      +R+A +VVATAGA EH MCKRYIDPD+ICCVV  L E +     C ++ P +R+A +F      P V+A    A E       PKLVAL ASP             ++V +T   + +LLD+ +ADLAAPV+ LQEVK  T  V+LE++ V   AT  E+ LL CL KLVL R++  AP  S++  +A+ LL     R  G   A             +D  W FP + +  LCQ+AL      + E   ++     G  M  G          E    L  LMNL++AVDEIGGE   ++ L  L+
Sbjct:  138 VGGVKCYPPLSDNQLIFFQQKALLVDHQHPKSWKNVRESSLRKVKLLPAGKEEEERQFTPRQWPTLRKSLAGGSN-DPGHGGGGMDLTRSTPRGYQEELFDAVMECERNSLVYLPTGLGKTLVAAMVLKQMLDWNPERQAYFLVETTALAMQQTTRLQNELGGTVKKIEMLVGSSL--QAFGGK-RGKIDHG-----LVKLEC------VRDANIVVATAGAFEHCMCKRYIDPDAICCVV--LDEAHH----CGKEHPFNRVARSFLTMKAFPSVQATPDRAKE------FPKLVALTASP----------AGELSVHDTTVRINQLLDRLEADLAAPVQHLQEVKSLTPSVDLELLNV--TATASETTLLGCLEKLVLSRLVGLAPEASEAHAQAQSLLDSLGGRMRGAAAAATASTAAGADVPRKDDAWVFPNKFFTALCQRALSAGGAEQREGWWESD----GTVMDEGSXXXXXXXXXE-ASQLHSLMNLSFAVDEIGGEAIWQRALEELD 609          
BLAST of mRNA_F-serratus_M_contig102.263.1 vs. uniprot
Match: A0A0H5R4I3_9EUKA (Uncharacterized protein n=1 Tax=Spongospora subterranea TaxID=70186 RepID=A0A0H5R4I3_9EUKA)

HSP 1 Score: 75.1 bits (183), Expect = 1.950e-10
Identity = 71/251 (28.29%), Postives = 117/251 (46.61%), Query Frame = 0
Query:   26 NGSRISSWKSAREQG-LEKLKLIQPSKEDGKRQFTPQKRPPLIRSV--EDNEGVEASARGDGLITTRPRSYQTEVFQSVVKSSRNSLVYLPSGLGETLVAAMVLKTLMDLNAERQAYFVVENGAEAMQQAQKLQKDLR-CTVEVMVGSSLGFEALGGEDSGKGGDGSSSGDACDLRCQQKLLDLREARLVVATAGALEHAMCKRYIDPDSICCVVFLLQETYRRNKVCSRDSPLDRLANAFFLPRVRAVNA 272
            N   ISSWK+  EQ      ++ QP +      F       LI+    ED   V+ S     L  + P  YQ +++Q  +    NSL++LP+G G+TL++AM ++ ++ LN    A F+VE  A A+QQ   L  +L   ++ ++VGS L  +                           + +LR A ++VATAG+  +A+ +  +D   IC +V  + E +   K    +S L +L  A   P++ A+ A
Sbjct:  100 NSVPISSWKTVVEQREWASCQVCQPDQPPSDTSF-------LIKQTFNEDLTLVDTSTPVPQLTKSSPYDYQVDMYQRAMAMPDNSLIFLPTGFGKTLISAMFIRRMLQLNPLFSALFIVETNALAIQQYTVLINELGDLSIRILVGSMLPSKPN----------------------INHIAELRSADIIVATAGSYLNAVEQNLLDFGRICALV--MDEAHHCAKNHLFNSLLHKLYGAH-RPKIMALTA 318          
BLAST of mRNA_F-serratus_M_contig102.263.1 vs. uniprot
Match: UPI001425AD08 (endoribonuclease Dicer homolog 3a-like n=1 Tax=Anneissia japonica TaxID=1529436 RepID=UPI001425AD08)

HSP 1 Score: 62.4 bits (150), Expect = 1.920e-6
Identity = 30/77 (38.96%), Postives = 54/77 (70.13%), Query Frame = 0
Query:   83 DGLITTRPRSYQTEVFQSVVKSSRNSLVYLPSGLGETLVAAMVLKTLMDLNAERQAYFVVENGAEAMQQAQKLQKDL 159
            D L +T+ R+YQ E++   ++S RN++++L +G G+TLVAAM+ +T++ +N  RQ  F+V+     +QQ+  L+K+L
Sbjct:  263 DSLTSTKSRNYQRELYMQAMES-RNAVIFLQTGTGKTLVAAMIARTMLVMNPGRQVVFLVDKILLCIQQSDYLEKEL 338          
BLAST of mRNA_F-serratus_M_contig102.263.1 vs. uniprot
Match: A0A2B4R4E1_STYPI (RNA-directed RNA polymerase n=2 Tax=Stylophora pistillata TaxID=50429 RepID=A0A2B4R4E1_STYPI)

HSP 1 Score: 61.6 bits (148), Expect = 4.220e-6
Identity = 36/87 (41.38%), Postives = 52/87 (59.77%), Query Frame = 0
Query:   83 DGLITTRPRSYQTEVFQSVVKSSRNSLVYLPSGLGETLVAAMVLKTLMDLNAERQAYFVVENGAEAMQQAQKLQKDLR-CTVEVMVG 168
            D L    PR  Q EVF S ++   N+LVY+P+GLG+TL+AAMV+  +  LN  +   F+V+    A QQ   ++  L   TVE++VG
Sbjct:  483 DPLTRKEPRDSQREVFLSAMRG--NTLVYVPTGLGKTLIAAMVMSCMKKLNPSKVMVFLVDRAPLAYQQRDYIKSHLTDLTVEILVG 567          
BLAST of mRNA_F-serratus_M_contig102.263.1 vs. uniprot
Match: UPI000C0483E4 (uncharacterized protein LOC111346816 n=1 Tax=Stylophora pistillata TaxID=50429 RepID=UPI000C0483E4)

HSP 1 Score: 60.1 bits (144), Expect = 1.190e-5
Identity = 35/87 (40.23%), Postives = 51/87 (58.62%), Query Frame = 0
Query:   83 DGLITTRPRSYQTEVFQSVVKSSRNSLVYLPSGLGETLVAAMVLKTLMDLNAERQAYFVVENGAEAMQQAQKLQKDLR-CTVEVMVG 168
            D L    PR YQ E+F S ++   N+LVYLP+G G+TL+AAMV+  +  LN  +    +V+    A QQ   ++  L+  TVE +VG
Sbjct:  141 DSLTREEPRDYQRELFLSAMRG--NTLVYLPTGSGKTLIAAMVMSCMKKLNPSKVMVLLVDRVPLAHQQRDYIKSQLKDLTVETLVG 225          
BLAST of mRNA_F-serratus_M_contig102.263.1 vs. uniprot
Match: UPI000359D49A (uncharacterized protein LOC101845957 n=1 Tax=Aplysia californica TaxID=6500 RepID=UPI000359D49A)

HSP 1 Score: 60.1 bits (144), Expect = 1.200e-5
Identity = 30/74 (40.54%), Postives = 49/74 (66.22%), Query Frame = 0
Query:   86 ITTRPRSYQTEVFQSVVKSSRNSLVYLPSGLGETLVAAMVLKTLMDLNAERQAYFVVENGAEAMQQAQKLQKDL 159
            + T PR YQ E+ +  +KS  +SLVYLP+G G+TLVA +V+  +++ N +R   F+V+     MQQA+ +++ L
Sbjct: 1081 VDTTPRPYQIELVEKALKS--DSLVYLPTGTGKTLVAVVVIAAMLEANTDRPVLFLVDKVLLVMQQAKYIKRQL 1152          
BLAST of mRNA_F-serratus_M_contig102.263.1 vs. uniprot
Match: A0A2B4R985_STYPI (RNA-directed RNA polymerase n=2 Tax=Stylophora pistillata TaxID=50429 RepID=A0A2B4R985_STYPI)

HSP 1 Score: 60.1 bits (144), Expect = 1.270e-5
Identity = 35/87 (40.23%), Postives = 51/87 (58.62%), Query Frame = 0
Query:   83 DGLITTRPRSYQTEVFQSVVKSSRNSLVYLPSGLGETLVAAMVLKTLMDLNAERQAYFVVENGAEAMQQAQKLQKDLR-CTVEVMVG 168
            D L    PR YQ E+F S ++   N+LVYLP+G G+TL+AAMV+  +  LN  +    +V+    A QQ   ++  L+  TVE +VG
Sbjct:  141 DSLTREEPRDYQRELFLSAMRG--NTLVYLPTGSGKTLIAAMVMSCMKKLNPSKVMVLLVDRVPLAHQQRDYIKSQLKDLTVETLVG 225          
BLAST of mRNA_F-serratus_M_contig102.263.1 vs. uniprot
Match: UPI00077A0B41 (putative ATP-dependent DNA helicase fml2 n=1 Tax=Acropora digitifera TaxID=70779 RepID=UPI00077A0B41)

HSP 1 Score: 59.3 bits (142), Expect = 1.880e-5
Identity = 38/101 (37.62%), Postives = 56/101 (55.45%), Query Frame = 0
Query:   59 TPQKRPPLIRSVEDNEGVEASARGDGLITTRPRSYQTEVFQSVVKSSRNSLVYLPSGLGETLVAAMVLKTLMDLNAERQAYFVVENGAEAMQQAQKLQKDL 159
            +PQ   P++   +  E    S   D L    PR YQ E+F S +   RN+LVYLP+G G+TL+AAMVL  + +LN  +   F+V+      QQ+  ++K L
Sbjct:  148 SPQASLPMVY-CDTGELTHTSREIDVLTRENPRDYQRELFLSTM--CRNTLVYLPTGSGKTLIAAMVLSCMRELNPGKLMVFLVDRIPLVFQQSNYIKKQL 245          
BLAST of mRNA_F-serratus_M_contig102.263.1 vs. uniprot
Match: UPI001CF5EE72 (LOW QUALITY PROTEIN: uncharacterized protein LOC114966049 n=4 Tax=Acropora TaxID=6127 RepID=UPI001CF5EE72)

HSP 1 Score: 58.9 bits (141), Expect = 2.900e-5
Identity = 33/77 (42.86%), Postives = 47/77 (61.04%), Query Frame = 0
Query:   83 DGLITTRPRSYQTEVFQSVVKSSRNSLVYLPSGLGETLVAAMVLKTLMDLNAERQAYFVVENGAEAMQQAQKLQKDL 159
            D L    PR YQ E+F S +   RN+LVYLP+G G+TL+AAMVL  + +LN  +   F+V+      QQ+  ++K L
Sbjct:  187 DVLTRENPRDYQRELFLSTM--CRNTLVYLPTGSGKTLIAAMVLSCMRELNPGKLMVFLVDRIPLVFQQSNYIKKQL 261          
BLAST of mRNA_F-serratus_M_contig102.263.1 vs. uniprot
Match: A0A2B4RG40_STYPI (RNA-directed RNA polymerase n=1 Tax=Stylophora pistillata TaxID=50429 RepID=A0A2B4RG40_STYPI)

HSP 1 Score: 58.9 bits (141), Expect = 2.950e-5
Identity = 35/87 (40.23%), Postives = 51/87 (58.62%), Query Frame = 0
Query:   83 DGLITTRPRSYQTEVFQSVVKSSRNSLVYLPSGLGETLVAAMVLKTLMDLNAERQAYFVVENGAEAMQQAQKLQKDLR-CTVEVMVG 168
            D L    PR YQ E+F S ++   N+LVYLP+G G+TL+A MV+  +  LN  +   F+V+    A QQ   ++  L   TVE++VG
Sbjct:  791 DSLTRQVPRDYQRELFLSAMRG--NTLVYLPTGSGKTLIAVMVMSCMKKLNPRKVMVFLVDRVPLAHQQRDYIKSQLTDLTVEMLVG 875          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig102.263.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 13
Match NameE-valueIdentityDescription
D8LU32_ECTSI3.250e-8742.64DEAD box helicase n=2 Tax=Ectocarpus TaxID=2879 Re... [more]
A0A0H5R4I3_9EUKA1.950e-1028.29Uncharacterized protein n=1 Tax=Spongospora subter... [more]
UPI001425AD081.920e-638.96endoribonuclease Dicer homolog 3a-like n=1 Tax=Ann... [more]
A0A2B4R4E1_STYPI4.220e-641.38RNA-directed RNA polymerase n=2 Tax=Stylophora pis... [more]
UPI000C0483E41.190e-540.23uncharacterized protein LOC111346816 n=1 Tax=Stylo... [more]
UPI000359D49A1.200e-540.54uncharacterized protein LOC101845957 n=1 Tax=Aplys... [more]
A0A2B4R985_STYPI1.270e-540.23RNA-directed RNA polymerase n=2 Tax=Stylophora pis... [more]
UPI00077A0B411.880e-537.62putative ATP-dependent DNA helicase fml2 n=1 Tax=A... [more]
UPI001CF5EE722.900e-542.86LOW QUALITY PROTEIN: uncharacterized protein LOC11... [more]
A0A2B4RG40_STYPI2.950e-540.23RNA-directed RNA polymerase n=1 Tax=Stylophora pis... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 484..514
NoneNo IPR availableGENE3D3.40.50.300coord: 85..365
e-value: 8.8E-18
score: 66.7
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 87..237

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig102contigF-serratus_M_contig102:141099..146035 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig102.263.1mRNA_F-serratus_M_contig102.263.1Fucus serratus malemRNAF-serratus_M_contig102 141097..146035 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig102.263.1 ID=prot_F-serratus_M_contig102.263.1|Name=mRNA_F-serratus_M_contig102.263.1|organism=Fucus serratus male|type=polypeptide|length=578bp
VGAVKCCPPFSTNRLIFFQHKALLTNGSRISSWKSAREQGLEKLKLIQPS
KEDGKRQFTPQKRPPLIRSVEDNEGVEASARGDGLITTRPRSYQTEVFQS
VVKSSRNSLVYLPSGLGETLVAAMVLKTLMDLNAERQAYFVVENGAEAMQ
QAQKLQKDLRCTVEVMVGSSLGFEALGGEDSGKGGDGSSSGDACDLRCQQ
KLLDLREARLVVATAGALEHAMCKRYIDPDSICCVVFLLQETYRRNKVCS
RDSPLDRLANAFFLPRVRAVNAPACETASVSKLPKLVALMASPPQVARSS
LTPTEAVTVAETVTMVEELLDKFKADLAAPVKTLQEVKDRTAGVELEVVK
VKVMATPEESLLLRCLAKLVLRRIIKAAPGSDSAVEAKKLLHRYNDRGGG
NEMAQLQDGVWTFPGQSYVGLCQQALKVSSRRRAETEIKAAEGGGGAEMG
GGELSSGDDRKTEDEYHLIDLMNLAYAVDEIGGERTLRKLLNMLEQELKD
AAERQQEQERVEEEVEMADDGGKGRKRHAAREGAGVIETDDPDRDDAIHI
VRSYLPPDDGSDGDGGVDDFEEATEAEA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase