mRNA_F-serratus_M_contig1358.2650.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig1358.2650.1 vs. uniprot
Match: D7G6V7_ECTSI (Protein kish n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G6V7_ECTSI) HSP 1 Score: 122 bits (305), Expect = 1.170e-30 Identity = 56/71 (78.87%), Postives = 65/71 (91.55%), Query Frame = 2
Query: 386 SALFNFVDLITVILLMICICTYIRGYRRGIFDVEDGSRHGLRGVCWKASRVGERLSPYVSASLLVMAVHVL 598
SALF+ DL+TVILL+IC+CTY+RGYR+GIFDVEDGS GLRG+CWKA+RVGERLSPYVSA+LLVMA VL
Sbjct: 2 SALFSMPDLLTVILLLICVCTYVRGYRKGIFDVEDGSHSGLRGLCWKAARVGERLSPYVSAALLVMAGRVL 72
BLAST of mRNA_F-serratus_M_contig1358.2650.1 vs. uniprot
Match: A0A835YW34_9STRA (Protein kish n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YW34_9STRA) HSP 1 Score: 101 bits (251), Expect = 7.370e-23 Identity = 46/74 (62.16%), Postives = 58/74 (78.38%), Query Frame = 2
Query: 386 SALFNFVDLITVILLMICICTYIRGYRRGIFD--VEDGSRHGLRGVCWKASRVGERLSPYVSASLLVMAVHVLF 601
SA+F+F LITV+LL+IC CTY+RG+R GIFD E G +G+CWK SR+GER+SPYVS S L+MAVH+LF
Sbjct: 2 SAIFDFSSLITVLLLLICTCTYLRGFRSGIFDNSAEPHRHTGFKGLCWKFSRIGERISPYVSVSCLLMAVHILF 75
BLAST of mRNA_F-serratus_M_contig1358.2650.1 vs. uniprot
Match: B7FZL0_PHATC (Protein kish n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FZL0_PHATC) HSP 1 Score: 91.3 bits (225), Expect = 2.950e-19 Identity = 44/73 (60.27%), Postives = 53/73 (72.60%), Query Frame = 2
Query: 386 SALFNFVDLITVILLMICICTYIRGYRRGIFDVEDGSRHGLRGVCWKASRVGERLSPYVSASLLVMAVHVLFF 604
SA+F+F L+TV+LL+IC CTY+R R GIFD +R G G WK SRVGERLSPYV A +MAVH+LFF
Sbjct: 2 SAIFDFSSLVTVLLLLICTCTYLRELRPGIFDA---AREGFWGFLWKLSRVGERLSPYVGAGCALMAVHILFF 71
BLAST of mRNA_F-serratus_M_contig1358.2650.1 vs. uniprot
Match: F0WK68_9STRA (Protein kish n=2 Tax=Albugo TaxID=65356 RepID=F0WK68_9STRA) HSP 1 Score: 89.7 bits (221), Expect = 1.230e-18 Identity = 43/75 (57.33%), Postives = 54/75 (72.00%), Query Frame = 2
Query: 386 SALFNFVDLITVILLMICICTYIRGYRRGIFD--VEDGSRHGLRGVCWKASRVGERLSPYVSASLLVMAVHVLFF 604
SALF+ LITVILL IC C+YIR +FD + G GL G+CWKASR+GER SPYV+ +L++MA+H LFF
Sbjct: 2 SALFSLPGLITVILLFICTCSYIRAKFPTVFDRNQQPGKHEGLSGLCWKASRIGERKSPYVAGALILMALHTLFF 76
BLAST of mRNA_F-serratus_M_contig1358.2650.1 vs. uniprot
Match: F0Y3L9_AURAN (Protein kish n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y3L9_AURAN) HSP 1 Score: 89.0 bits (219), Expect = 3.000e-18 Identity = 42/85 (49.41%), Postives = 54/85 (63.53%), Query Frame = 2
Query: 386 SALFNFVDLITVILLMICICTYIRGYRRGIFD------------VEDGSRHGLRGVCWKASRVGERLSPYVSASLLVMAVHVLFF 604
SA+F+F L+TV+LL+IC CTY+R R +FD + R G+RG CWKASR+GERLSPYVS + MA H+L F
Sbjct: 2 SAIFDFSSLVTVLLLIICTCTYVRAMRPSVFDGGLSADDLASPHLSYKRRSGIRGACWKASRIGERLSPYVSVVVAAMAFHILLF 86
BLAST of mRNA_F-serratus_M_contig1358.2650.1 vs. uniprot
Match: A0A024TZQ1_9STRA (Protein kish n=5 Tax=Aphanomyces TaxID=100860 RepID=A0A024TZQ1_9STRA) HSP 1 Score: 88.2 bits (217), Expect = 4.580e-18 Identity = 44/76 (57.89%), Postives = 53/76 (69.74%), Query Frame = 2
Query: 386 SALFNFVDLITVILLMICICTYIRGYRRGIFDVED--GSRHGLRGVCWKASRVGERLSPYVSASLLVMAVHVLFFA 607
+ALFNF ++T++LL+IC CTYIR IFD G G G+CWKASR+GER S YV+A LL MAVH LFFA
Sbjct: 2 TALFNFTGMLTMVLLIICTCTYIRLKMPTIFDRGQLPGKHEGFTGLCWKASRIGERKSEYVAALLLAMAVHRLFFA 77
BLAST of mRNA_F-serratus_M_contig1358.2650.1 vs. uniprot
Match: K3X7N3_GLOUD (Protein kish n=4 Tax=Pythiaceae TaxID=4782 RepID=K3X7N3_GLOUD) HSP 1 Score: 87.4 bits (215), Expect = 8.480e-18 Identity = 45/76 (59.21%), Postives = 52/76 (68.42%), Query Frame = 2
Query: 386 SALFNFVDLITVILLMICICTYIRGYRRGIFD--VEDGSRHGLRGVCWKASRVGERLSPYVSASLLVMAVHVLFFA 607
SALF+ LITVILL IC CTYIR IFD + G GL G+CWKASR+GER SPYV+ L+VMA H L F+
Sbjct: 2 SALFSLQGLITVILLFICTCTYIRMKFPTIFDRGQQPGKHEGLSGLCWKASRIGERKSPYVAGVLVVMAFHTLLFS 77
BLAST of mRNA_F-serratus_M_contig1358.2650.1 vs. uniprot
Match: A0A1Z5JCC7_FISSO (Protein kish n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JCC7_FISSO) HSP 1 Score: 87.4 bits (215), Expect = 9.460e-18 Identity = 42/78 (53.85%), Postives = 53/78 (67.95%), Query Frame = 2
Query: 386 SALFNFVDLITVILLMICICTYIRGYRRGIFDV--EDGS----RHGLRGVCWKASRVGERLSPYVSASLLVMAVHVLF 601
SA+FNF L+TV+LL+IC C Y+R R GIFD ++G R GL G WK SR+GERLSPY+ +MA+HVLF
Sbjct: 2 SAIFNFSSLLTVLLLLICTCAYLRELRPGIFDPPRKEGETKLKREGLTGFLWKMSRIGERLSPYIGVGCFIMAIHVLF 79
BLAST of mRNA_F-serratus_M_contig1358.2650.1 vs. uniprot
Match: D0NVB3_PHYIT (Protein kish n=18 Tax=Peronosporaceae TaxID=4777 RepID=D0NVB3_PHYIT) HSP 1 Score: 85.5 bits (210), Expect = 4.220e-17 Identity = 43/76 (56.58%), Postives = 54/76 (71.05%), Query Frame = 2
Query: 386 SALFNFVDLITVILLMICICTYIRGYRRGIFDVED--GSRHGLRGVCWKASRVGERLSPYVSASLLVMAVHVLFFA 607
SALF+ L+TVILL IC CTYI+ +FD G GL G+CWKASR+GER S YV+++L+VMAVH LFF+
Sbjct: 2 SALFSLQGLLTVILLFICTCTYIKMKFPTLFDRGQLPGKHEGLGGLCWKASRIGERKSQYVASALVVMAVHTLFFS 77
BLAST of mRNA_F-serratus_M_contig1358.2650.1 vs. uniprot
Match: A0A6G0XHW2_9STRA (Protein kish n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XHW2_9STRA) HSP 1 Score: 85.5 bits (210), Expect = 4.340e-17 Identity = 42/76 (55.26%), Postives = 52/76 (68.42%), Query Frame = 2
Query: 386 SALFNFVDLITVILLMICICTYIRGYRRGIFD--VEDGSRHGLRGVCWKASRVGERLSPYVSASLLVMAVHVLFFA 607
+ALFNF ++T++LL+IC CT+IR IFD E G G G+CWKASR+GER S YV+ LL MAVH L FA
Sbjct: 2 TALFNFTGMLTMLLLVICTCTFIRMKMPTIFDRGQEPGKHEGFTGLCWKASRIGERKSEYVALMLLAMAVHRLLFA 77 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1358.2650.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig1358.2650.1 >prot_F-serratus_M_contig1358.2650.1 ID=prot_F-serratus_M_contig1358.2650.1|Name=mRNA_F-serratus_M_contig1358.2650.1|organism=Fucus serratus male|type=polypeptide|length=61bp MICICTYIRGYRRGIFDVEDGSRHGLRGVCWKASRVGERLSPYVSASLLVback to top mRNA from alignment at F-serratus_M_contig1358:226765..234603- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig1358.2650.1 ID=mRNA_F-serratus_M_contig1358.2650.1|Name=mRNA_F-serratus_M_contig1358.2650.1|organism=Fucus serratus male|type=mRNA|length=7839bp|location=Sequence derived from alignment at F-serratus_M_contig1358:226765..234603- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig1358:226765..234603- >mRNA_F-serratus_M_contig1358.2650.1 ID=mRNA_F-serratus_M_contig1358.2650.1|Name=mRNA_F-serratus_M_contig1358.2650.1|organism=Fucus serratus male|type=CDS|length=366bp|location=Sequence derived from alignment at F-serratus_M_contig1358:226765..234603- (Fucus serratus male)back to top |