prot_F-serratus_M_contig1354.2636.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig1354.2636.1
Unique Nameprot_F-serratus_M_contig1354.2636.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length105
Homology
BLAST of mRNA_F-serratus_M_contig1354.2636.1 vs. uniprot
Match: A0A0C2WN23_AMAMK (Integrase catalytic domain-containing protein (Fragment) n=1 Tax=Amanita muscaria (strain Koide BX008) TaxID=946122 RepID=A0A0C2WN23_AMAMK)

HSP 1 Score: 99.0 bits (245), Expect = 6.220e-22
Identity = 46/97 (47.42%), Postives = 69/97 (71.13%), Query Frame = 0
Query:    9 VYNQVARPKDKLVIGTKLLYKRKIGQDGKVEKYKCRLVAQGFWQVKGVHYTEKYSPTPLTAPIRMLLAMSVAKDGELRHFDAEQAFLKADIDEEIYI 105
            V+ +V RP+D+ +IG+K ++K K G DG+VEKYK RLVAQGF QV+G+ Y E ++P   +  IR+LLA++   D E+   D + AFL  +++EEIY+
Sbjct: 1026 VFEEVPRPRDRKIIGSKWVFKTKTGPDGQVEKYKARLVAQGFSQVEGIDYNETFAPVTKSNSIRLLLALAARHDWEIHQMDVKSAFLNGELEEEIYM 1122          
BLAST of mRNA_F-serratus_M_contig1354.2636.1 vs. uniprot
Match: A0A2R6NNP3_9APHY (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Hermanssonia centrifuga TaxID=98765 RepID=A0A2R6NNP3_9APHY)

HSP 1 Score: 97.1 bits (240), Expect = 2.160e-21
Identity = 48/105 (45.71%), Postives = 72/105 (68.57%), Query Frame = 0
Query:    1 MVGMVKNFVYNQVARPKDKLVIGTKLLYKRKIGQDGKVEKYKCRLVAQGFWQVKGVHYTEKYSPTPLTAPIRMLLAMSVAKDGELRHFDAEQAFLKADIDEEIYI 105
            M+  VK  ++++V  PK++ V+G+K +++ K G +GK+EKYK RLVAQGF QVKG+ YTE ++P      IR LL+++   D E+   D + AFL  D+DEEIY+
Sbjct:   17 MLAFVKANLFDEVECPKNRKVVGSKWVFRIKRGPNGKIEKYKARLVAQGFTQVKGIDYTETFAPVAKFISIRTLLSLAAKLDLEIHQMDVKSAFLNGDLDEEIYM 121          
BLAST of mRNA_F-serratus_M_contig1354.2636.1 vs. uniprot
Match: A0A060SSE0_PYCCI (Integrase catalytic domain-containing protein n=1 Tax=Pycnoporus cinnabarinus TaxID=5643 RepID=A0A060SSE0_PYCCI)

HSP 1 Score: 92.8 bits (229), Expect = 9.000e-20
Identity = 45/105 (42.86%), Postives = 71/105 (67.62%), Query Frame = 0
Query:    1 MVGMVKNFVYNQVARPKDKLVIGTKLLYKRKIGQDGKVEKYKCRLVAQGFWQVKGVHYTEKYSPTPLTAPIRMLLAMSVAKDGELRHFDAEQAFLKADIDEEIYI 105
            ++   K  +Y++V RP+++ V+  K +++ K G DGK++KYK RLVA+GF QV+GV YT+ ++P    A IRMLLA +   D E+   D + AFL  D++EEI++
Sbjct:  987 LLSFAKAELYDEVERPRNRKVVDCKWVFRIKHGPDGKIQKYKARLVAKGFTQVEGVDYTDTFAPVTKFASIRMLLAFAAKHDLEVHQMDVKSAFLNGDLEEEIFM 1091          
BLAST of mRNA_F-serratus_M_contig1354.2636.1 vs. uniprot
Match: A0A060SUY4_PYCCI (Uncharacterized protein n=1 Tax=Pycnoporus cinnabarinus TaxID=5643 RepID=A0A060SUY4_PYCCI)

HSP 1 Score: 89.7 bits (221), Expect = 1.070e-18
Identity = 43/96 (44.79%), Postives = 66/96 (68.75%), Query Frame = 0
Query:   10 YNQVARPKDKLVIGTKLLYKRKIGQDGKVEKYKCRLVAQGFWQVKGVHYTEKYSPTPLTAPIRMLLAMSVAKDGELRHFDAEQAFLKADIDEEIYI 105
            Y++V RP+++ V+G K +++ K G DG VE+YK RLVAQGF QV+G+ Y+E ++P    A IR +L ++   D E+   D + AFL  D+DEEI++
Sbjct:  962 YDEVERPQNRKVVGCKWVFRLKRGADGSVERYKARLVAQGFTQVEGIDYSEMFAPVSKFASIRTVLTLAALFDLEIDQMDVKSAFLNGDLDEEIFM 1057          
BLAST of mRNA_F-serratus_M_contig1354.2636.1 vs. uniprot
Match: A0A438GNV2_VITVI (Retrovirus-related Pol polyprotein from transposon RE1 n=1 Tax=Vitis vinifera TaxID=29760 RepID=A0A438GNV2_VITVI)

HSP 1 Score: 88.2 bits (217), Expect = 3.540e-18
Identity = 44/99 (44.44%), Postives = 60/99 (60.61%), Query Frame = 0
Query:    7 NFVYNQVARPKDKLVIGTKLLYKRKIGQDGKVEKYKCRLVAQGFWQVKGVHYTEKYSPTPLTAPIRMLLAMSVAKDGELRHFDAEQAFLKADIDEEIYI 105
            N  +  V  P +K  IG K +YK K   DG +E+YK RLVAQGF Q++G+ Y E +SP      +R  LA++VAK  EL   D   AFL  D++EE+Y+
Sbjct:  110 NQTWKVVDLPPEKKAIGCKWIYKIKYNADGSIERYKARLVAQGFTQIEGIDYQETFSPVAKMTSVRCFLAIAVAKRWELHQMDVNNAFLHGDLEEEVYM 208          
BLAST of mRNA_F-serratus_M_contig1354.2636.1 vs. uniprot
Match: A0A5E8C1Z7_9ASCO (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Saprochaete ingens TaxID=2606893 RepID=A0A5E8C1Z7_9ASCO)

HSP 1 Score: 88.2 bits (217), Expect = 3.740e-18
Identity = 41/99 (41.41%), Postives = 63/99 (63.64%), Query Frame = 0
Query:    7 NFVYNQVARPKDKLVIGTKLLYKRKIGQDGKVEKYKCRLVAQGFWQVKGVHYTEKYSPTPLTAPIRMLLAMSVAKDGELRHFDAEQAFLKADIDEEIYI 105
            N VY  V  P  +  +GTK + K+K+  DG ++KYK RLV QGF Q  GV Y + ++P    + +R++ A+S AK+ E+ H D + AFL  D++E+IY+
Sbjct:  608 NHVYQVVPLPAGRKALGTKWVLKKKLNTDGSIDKYKARLVVQGFRQKFGVDYVDTFAPVMRFSTVRLIFALSAAKNCEMHHVDVKNAFLNGDLEEDIYV 706          
BLAST of mRNA_F-serratus_M_contig1354.2636.1 vs. uniprot
Match: A0A5E8BZM0_9ASCO (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Saprochaete ingens TaxID=2606893 RepID=A0A5E8BZM0_9ASCO)

HSP 1 Score: 88.2 bits (217), Expect = 3.740e-18
Identity = 41/99 (41.41%), Postives = 63/99 (63.64%), Query Frame = 0
Query:    7 NFVYNQVARPKDKLVIGTKLLYKRKIGQDGKVEKYKCRLVAQGFWQVKGVHYTEKYSPTPLTAPIRMLLAMSVAKDGELRHFDAEQAFLKADIDEEIYI 105
            N VY  V  P  +  +GTK + K+K+  DG ++KYK RLV QGF Q  GV Y + ++P    + +R++ A+S AK+ E+ H D + AFL  D++E+IY+
Sbjct:  921 NHVYQVVPLPAGRKALGTKWVLKKKLNTDGSIDKYKARLVVQGFRQKFGVDYVDTFAPVMRFSTVRLIFALSAAKNCEMHHVDVKNAFLNGDLEEDIYV 1019          
BLAST of mRNA_F-serratus_M_contig1354.2636.1 vs. uniprot
Match: A0A5E8C4M5_9ASCO (Integrase catalytic domain-containing protein n=1 Tax=Saprochaete ingens TaxID=2606893 RepID=A0A5E8C4M5_9ASCO)

HSP 1 Score: 88.2 bits (217), Expect = 3.800e-18
Identity = 41/99 (41.41%), Postives = 63/99 (63.64%), Query Frame = 0
Query:    7 NFVYNQVARPKDKLVIGTKLLYKRKIGQDGKVEKYKCRLVAQGFWQVKGVHYTEKYSPTPLTAPIRMLLAMSVAKDGELRHFDAEQAFLKADIDEEIYI 105
            N VY  V  P  +  +GTK + K+K+  DG ++KYK RLV QGF Q  GV Y + ++P    + +R++ A+S AK+ E+ H D + AFL  D++E+IY+
Sbjct: 1513 NHVYQVVPLPAGRKALGTKWVLKKKLNTDGSIDKYKARLVVQGFRQKFGVDYVDTFAPVMRFSTVRLIFALSAAKNCEMHHVDVKNAFLNGDLEEDIYV 1611          
BLAST of mRNA_F-serratus_M_contig1354.2636.1 vs. uniprot
Match: A0A5E8C1N6_9ASCO (Integrase catalytic domain-containing protein n=3 Tax=Saprochaete ingens TaxID=2606893 RepID=A0A5E8C1N6_9ASCO)

HSP 1 Score: 88.2 bits (217), Expect = 3.810e-18
Identity = 41/99 (41.41%), Postives = 63/99 (63.64%), Query Frame = 0
Query:    7 NFVYNQVARPKDKLVIGTKLLYKRKIGQDGKVEKYKCRLVAQGFWQVKGVHYTEKYSPTPLTAPIRMLLAMSVAKDGELRHFDAEQAFLKADIDEEIYI 105
            N VY  V  P  +  +GTK + K+K+  DG ++KYK RLV QGF Q  GV Y + ++P    + +R++ A+S AK+ E+ H D + AFL  D++E+IY+
Sbjct: 1901 NHVYQVVPLPAGRKALGTKWVLKKKLNTDGSIDKYKARLVVQGFRQKFGVDYVDTFAPVMRFSTVRLIFALSAAKNCEMHHVDVKNAFLNGDLEEDIYV 1999          
BLAST of mRNA_F-serratus_M_contig1354.2636.1 vs. uniprot
Match: A0A5E8C8U5_9ASCO (Uncharacterized protein n=2 Tax=Saprochaete ingens TaxID=2606893 RepID=A0A5E8C8U5_9ASCO)

HSP 1 Score: 88.2 bits (217), Expect = 3.820e-18
Identity = 41/99 (41.41%), Postives = 63/99 (63.64%), Query Frame = 0
Query:    7 NFVYNQVARPKDKLVIGTKLLYKRKIGQDGKVEKYKCRLVAQGFWQVKGVHYTEKYSPTPLTAPIRMLLAMSVAKDGELRHFDAEQAFLKADIDEEIYI 105
            N VY  V  P  +  +GTK + K+K+  DG ++KYK RLV QGF Q  GV Y + ++P    + +R++ A+S AK+ E+ H D + AFL  D++E+IY+
Sbjct: 2393 NHVYQVVPLPAGRKALGTKWVLKKKLNTDGSIDKYKARLVVQGFRQKFGVDYVDTFAPVMRFSTVRLIFALSAAKNCEMHHVDVKNAFLNGDLEEDIYV 2491          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1354.2636.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A0C2WN23_AMAMK6.220e-2247.42Integrase catalytic domain-containing protein (Fra... [more]
A0A2R6NNP3_9APHY2.160e-2145.71Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A060SSE0_PYCCI9.000e-2042.86Integrase catalytic domain-containing protein n=1 ... [more]
A0A060SUY4_PYCCI1.070e-1844.79Uncharacterized protein n=1 Tax=Pycnoporus cinnaba... [more]
A0A438GNV2_VITVI3.540e-1844.44Retrovirus-related Pol polyprotein from transposon... [more]
A0A5E8C1Z7_9ASCO3.740e-1841.41Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A5E8BZM0_9ASCO3.740e-1841.41Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A5E8C4M5_9ASCO3.800e-1841.41Integrase catalytic domain-containing protein n=1 ... [more]
A0A5E8C1N6_9ASCO3.810e-1841.41Integrase catalytic domain-containing protein n=3 ... [more]
A0A5E8C8U5_9ASCO3.820e-1841.41Uncharacterized protein n=2 Tax=Saprochaete ingens... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 9..105
e-value: 2.2E-22
score: 79.9
IPR039537Retrotransposon Ty1/copia-likePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 13..104
NoneNo IPR availablePANTHERPTHR11439:SF273coord: 13..104

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1354contigF-serratus_M_contig1354:130094..130408 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1354.2636.1mRNA_F-serratus_M_contig1354.2636.1Fucus serratus malemRNAF-serratus_M_contig1354 130085..130408 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig1354.2636.1 ID=prot_F-serratus_M_contig1354.2636.1|Name=mRNA_F-serratus_M_contig1354.2636.1|organism=Fucus serratus male|type=polypeptide|length=105bp
MVGMVKNFVYNQVARPKDKLVIGTKLLYKRKIGQDGKVEKYKCRLVAQGF
WQVKGVHYTEKYSPTPLTAPIRMLLAMSVAKDGELRHFDAEQAFLKADID
EEIYI
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013103RVT_2
IPR039537Retrotran_Ty1/copia-like