prot_F-serratus_M_contig135.2614.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig135.2614.1
Unique Nameprot_F-serratus_M_contig135.2614.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length122
Homology
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BLAST of mRNA_F-serratus_M_contig135.2614.1 vs. uniprot
Match: D7FMM7_ECTSI (Ubiquinone biosynthesis protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMM7_ECTSI)

HSP 1 Score: 80.9 bits (198), Expect = 1.770e-15
Identity = 53/110 (48.18%), Postives = 66/110 (60.00%), Query Frame = 0 
Query:   14 QVPGGKTLAQAAPNVATLAAQAFSLMASQLPHGFRSYPVPS-AVGNTSDPNSSREEPNVSSGDGSIASHPPTYPGAPERDPWSEKLAGA-----GKSGRFEDELAREELE 117
            QVPG +TLAQ APNVA LA+QA S +ASQ+P   +  P    A G     ++S       +G  +    PPT+PGAPE+DPWS   A A     GK G+FE+ELAREE E
Sbjct:  272 QVPGAETLAQTAPNVAALASQALSFVASQVPRAGQGPPFSGGASGPPQSASASSAATQTKTGHDTPPPLPPTFPGAPEQDPWSSTHASAAAAASGKPGKFEEELAREERE 381
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BLAST of mRNA_F-serratus_M_contig135.2614.1 vs. uniprot
Match: A0A6H5JV38_9PHAE (Ubiquinone biosynthesis protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JV38_9PHAE)

HSP 1 Score: 62.0 bits (149), Expect = 9.640e-9
Identity = 46/110 (41.82%), Postives = 56/110 (50.91%), Query Frame = 0 
Query:   14 QVPGGKTLAQAAPNVATLAAQAFSLMASQLPHGFRSYPVPS-AVGNTSDPNSSREEPNVSSGDGSIASHPPTYPGAPERDPWSEK-----LAGAGKSGRFEDELAREELE 117
            QVPG + LAQ APNVA LA+QA S +ASQ+P   +  P    A G                          T+PGAPE+DPWS        A +G  G+FE+ELAREE E
Sbjct:  392 QVPGAEALAQTAPNVAALASQALSFVASQVPRAGQGPPFSGGASGPPXXXXXXXXXXXXXXXXXXXXXXXXTFPGAPEQDPWSSTHASTAAAASGTPGKFEEELAREERE 501
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig135.2614.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FMM7_ECTSI1.770e-1548.18Ubiquinone biosynthesis protein n=1 Tax=Ectocarpus... [more]
A0A6H5JV38_9PHAE9.640e-941.82Ubiquinone biosynthesis protein n=1 Tax=Ectocarpus... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig135contigF-serratus_M_contig135:714564..716198 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig135.2614.1mRNA_F-serratus_M_contig135.2614.1Fucus serratus malemRNAF-serratus_M_contig135 714098..716820 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig135.2614.1 ID=prot_F-serratus_M_contig135.2614.1|Name=mRNA_F-serratus_M_contig135.2614.1|organism=Fucus serratus male|type=polypeptide|length=122bp
MPRDFLTTAVDIFQVPGGKTLAQAAPNVATLAAQAFSLMASQLPHGFRSY
PVPSAVGNTSDPNSSREEPNVSSGDGSIASHPPTYPGAPERDPWSEKLAG
AGKSGRFEDELAREELEFVWR*
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