prot_F-serratus_M_contig135.2613.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig135.2613.1
Unique Nameprot_F-serratus_M_contig135.2613.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length373
Homology
BLAST of mRNA_F-serratus_M_contig135.2613.1 vs. uniprot
Match: D7FR75_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FR75_ECTSI)

HSP 1 Score: 316 bits (809), Expect = 1.540e-102
Identity = 164/327 (50.15%), Postives = 200/327 (61.16%), Query Frame = 0
Query:   30 RGELPDFPMSFGEMKVAAGYYTADGKYLGGLPKADTLSREIYDCQDYYF--PENGTANSTLCLQWEANEADGDEFQVGECECRFITAEAYCSVWSCNQVTTGVYCGYEDCHIDSNTDAILCECDLENES-GLFCDAWSCKQIDSKSRVEYEAYQCLRTSPSGHYCEAWNGNVTASDEIEVVACECKQEWQGEYVCSYWECEELGLNTCASSVNSWCNLGVSVGVGGGIGFLGVAVMCCCI-IYHAIASESPHFLRNQSFDVTLCFFVDGVCGLVWCCLWAVGVVIWGGVDGAKYVGIMWGVPIFATLSFLAVRS-RIIMIRGRDNEE 351
            R ELPDFPM+  +M+V AGYY+ADGKYLGG+PKA TLSREIYDC D+ +  P N  +N+T C  W A+E+ G  FQ+G+CEC+F                              N+D  LC+CD    + GL     SCKQI S  R E+E Y+C R SPSGHYCEAWNGNVTASDE E+V+CEC   W G+ VCS+WECEELGL+TC+S+  SWC+LGVS+GVGGGIG LGV V+C  I +   I SE           + L        G VWC  W+ GVVIWGG  GA YVGIMWGVPI       A R   +  +R +D +E
Sbjct:   52 RAELPDFPMTLADMEVLAGYYSADGKYLGGMPKAHTLSREIYDCTDFQYSEPNNTASNATYCTGWSADESYGGGFQLGDCECKFSXXXXXXXXXXXXX--------------QENSDYTLCQCDDTGAAEGLXXXXXSCKQICSGGRAEFEDYRCQRPSPSGHYCEAWNGNVTASDEFEIVSCECLANWHGDQVCSFWECEELGLSTCSSAGASWCDLGVSIGVGGGIGLLGVLVICYGIGLVGRIDSEGQSDTTAGLMGIAL--------GTVWCLSWSSGVVIWGGEAGATYVGIMWGVPIVLAAVVAAFRCFAVYRVRTKDEQE 356          
BLAST of mRNA_F-serratus_M_contig135.2613.1 vs. uniprot
Match: D7G428_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G428_ECTSI)

HSP 1 Score: 313 bits (802), Expect = 2.060e-101
Identity = 153/318 (48.11%), Postives = 198/318 (62.26%), Query Frame = 0
Query:   22 LIASIIAVRGELPDFPMSFGEMKVAAGYYTADGKYLGGLPKADTLSREIYDC--QDYYFPE---------NGTANSTLCLQWEANEADGDEFQVGECECRFITAEAYCSVWSCNQVTTGVYCGYE--DCHIDSNTDAILCECDLENESGLFCDAWSCKQIDSKSRVEYEAYQCLRTSPSGHYCEAWNGNVTASDEIEVVACECKQEWQGEYVCSYWECEELGLNTCASSVNSWCNLGVSVGVGGGIGFLGVAVMCCCIIYHAIASESPHFLRNQSFDVTLCFFVDGVCGLVWCCLWAVGVVIWGGVDGAKYVGIMWGV 326
            L +S+  V G  PD+PM+F +MKV AGYYT DGKYLGG+PKAD +S+EIY+C    Y++P          +G   +T C++W A+E+ G  FQ G CEC  I  E YCS W+CNQV     C     +C + +NTDA+LC+CDL+  SGL+CD+WSCKQIDS  R E+E Y C R           NGNVTASDE+EVV CEC   W G+ +CSYWECEE+GL++C +S   WC+LG+S+G+ G  G  G                S   +R       +C    GV G++WC +W+VGVVIWGG+DG  YVGIMWGV
Sbjct:   42 LSSSLGIVGGVYPDYPMTFADMKVLAGYYTEDGKYLGGIPKADPVSKEIYECAADTYFYPSGNDTVTDSTDGKDEATACMEWRADESAGGVFQKGTCECTSIDNENYCSAWTCNQVKEEEDCNSSGSNCVVSTNTDAVLCQCDLDVPSGLYCDSWSCKQIDSDGREEFEEYHCQREXXXXXXXXXXNGNVTASDEVEVVTCECVATWSGDRLCSYWECEEIGLSSC-NSTRGWCDLGLSIGLAGVFGLAGALAAGFSFASFGCFERSTTGMR-----AVVC---TGVGGILWCMVWSVGVVIWGGLDGVVYVGIMWGV 350          
BLAST of mRNA_F-serratus_M_contig135.2613.1 vs. uniprot
Match: A0A6H5JXC2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXC2_9PHAE)

HSP 1 Score: 185 bits (470), Expect = 2.100e-53
Identity = 107/258 (41.47%), Postives = 139/258 (53.88%), Query Frame = 0
Query:   15 VCMVLVDLIASIIA--VRGELPDFPMSFGEMKVAAGYYTADGKYLGGLPKADTLSREIYDC--QDYYFPENGTANST-----LCLQWEANEADGDEFQVGECECRFITAEAYCSVWSCNQVTTGVYCGYE--DCHIDSNTDAILCECDLENESGLFCDAWSCKQIDSKSRVEYEAYQCLRTSPSGHYCEAWNGNVTASDEIEVVACECKQEWQGEYVCSYWECEELGLNTCASSVNSWCNLGVSVGVGGGIGFLGVAV 261
            VC   V L+ S     VRGE PD+PM+F +MKV AGYYT DGK             EIY+C    +++P +  ANST      C++W A+E+ G                 YCS W C QV     C  +   C + +NT+++LC+CDLE  SGL+CD+WSCKQIDS+ R E+E Y C R           NGNVTASDE+EVV CEC        V +Y      GL +C SS+  WC+LG+SVG+ G  G  G  +
Sbjct:    9 VCSTFVFLVLSSFLGIVRGEFPDYPMTFTDMKVLAGYYTEDGK-------------EIYECATDGFFYPTDTMANSTDGEATACMEWRADESAG-----------------YCSAWICIQVAEVEECNSDGDSCFVSTNTNSVLCQCDLETASGLYCDSWSCKQIDSEGREEFEEYYCQRXXXXXXXXXXXNGNVTASDEVEVVTCECVATGT---VITY------GLKSC-SSIRGWCDLGLSVGLAGVFGLAGAVL 226          
BLAST of mRNA_F-serratus_M_contig135.2613.1 vs. uniprot
Match: A0A6H5JJI2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJI2_9PHAE)

HSP 1 Score: 78.6 bits (192), Expect = 3.210e-14
Identity = 50/114 (43.86%), Postives = 64/114 (56.14%), Query Frame = 0
Query:  239 NSWCNLGVSVGVGGGIGFLGVAVMCCCIIYHAIASESPHFLRNQSFDVTLCFFVDGVCGLVWCCLWAVGVVIWGGVDGAKYVGIMWGVPIFATLSFLAVRSRIIM-IRGRDNEE 351
            +SWC+LGVS+GVGGG G LGV +M C  I     + S   L N +  + +        G VWC  W+ GVVIW G  GA YVGIMWGVPI       A R  ++  +R +D +E
Sbjct:    8 SSWCDLGVSIGVGGGKGLLGV-LMICYGIGLVGRTNSRGQLNNAAGLMGIAL------GTVWCLSWSSGVVIWEGEVGATYVGIMWGVPIVLAAVVAASRCFVVYRVRTKDEQE 114          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig135.2613.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D7FR75_ECTSI1.540e-10250.15Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G428_ECTSI2.060e-10148.11Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A6H5JXC2_9PHAE2.100e-5341.47Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JJI2_9PHAE3.210e-1443.86Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 244..268
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..243
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 288..313
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 338..372
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 319..337
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 314..318
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 269..287
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..31
score: 0.515
NoneNo IPR availableTMHMMTMhelixcoord: 320..337
NoneNo IPR availableTMHMMTMhelixcoord: 246..268
NoneNo IPR availableTMHMMTMhelixcoord: 288..310

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig135contigF-serratus_M_contig135:667119..679903 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig135.2613.1mRNA_F-serratus_M_contig135.2613.1Fucus serratus malemRNAF-serratus_M_contig135 667020..681066 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig135.2613.1 ID=prot_F-serratus_M_contig135.2613.1|Name=mRNA_F-serratus_M_contig135.2613.1|organism=Fucus serratus male|type=polypeptide|length=373bp
MTTQGWLSNFGKAQVCMVLVDLIASIIAVRGELPDFPMSFGEMKVAAGYY
TADGKYLGGLPKADTLSREIYDCQDYYFPENGTANSTLCLQWEANEADGD
EFQVGECECRFITAEAYCSVWSCNQVTTGVYCGYEDCHIDSNTDAILCEC
DLENESGLFCDAWSCKQIDSKSRVEYEAYQCLRTSPSGHYCEAWNGNVTA
SDEIEVVACECKQEWQGEYVCSYWECEELGLNTCASSVNSWCNLGVSVGV
GGGIGFLGVAVMCCCIIYHAIASESPHFLRNQSFDVTLCFFVDGVCGLVW
CCLWAVGVVIWGGVDGAKYVGIMWGVPIFATLSFLAVRSRIIMIRGRDNE
EGRKSNMNTTTTGIAHNNGRPK*
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