mRNA_F-serratus_M_contig135.2602.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig135.2602.1
Unique NamemRNA_F-serratus_M_contig135.2602.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
[Close]
BLAST of mRNA_F-serratus_M_contig135.2602.1 vs. uniprot
Match: A0A6H5JUU7_9PHAE (ULP_PROTEASE domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUU7_9PHAE)

HSP 1 Score: 351 bits (900), Expect = 2.280e-107
Identity = 176/274 (64.23%), Postives = 206/274 (75.18%), Query Frame = 3 
Query:   24 ERIPLTWQQQQQVLAAWT-----ADGDINAVAVKAFNDTISKKSMMTLRDGLWLGDEVVNIYMRMLMQRNREAIASGRQVPKCGIMTSFFFTAISDSGAGYRYAGVKNFTRKAKIDLFSLDRFIFPVNVNQTHWTVGVIDFRRQRLEYYDSLPGRGFDILHGFEYMVRFVDDEAKAKRGGVGMDISHWPRVNVARRPMQRNGFDCGVFACMFADRLSKGIPLDFSQSDITHCREVMTLAILRGERSPSEEEILMEGWGSPPGGFA-WWSGDDDD 827
            ER  L+ +Q+ QV  AW+     ADGDI    V+AFND +SK S+ TLR G WLGDEV+N+YM+ L  RNREA+ASG+QVPKCGIM+SFF+T +SD+G GYRY GVK F +KAKIDLF LD+FIFP+NVNQ HWT+ VI+FR +RLEYYDSL     D   GFEYM RFVDDE++ KRGG  MDISHWPR N    P QRNG DCGVFA MFADRLSKG PL FSQSDI HCR+V+TLAILRGERSP+E+E  +E  GS PG    WW    D+
Sbjct:  303 ERPELSPEQEDQVRDAWSSQGGAADGDI---VVRAFNDMVSKASLRTLRSGEWLGDEVINLYMKSLQARNREAVASGKQVPKCGIMSSFFYTQLSDNGRGYRYQGVKRFLKKAKIDLFDLDKFIFPINVNQNHWTLAVINFRLERLEYYDSLGAPFGDA--GFEYMARFVDDESRNKRGGQEMDISHWPRFNYQNVPHQRNGIDCGVFASMFADRLSKGRPLSFSQSDIRHCRKVLTLAILRGERSPTEKEAFLEDGGSVPGDAGEWWEPPQDE 571
[Close]
BLAST of mRNA_F-serratus_M_contig135.2602.1 vs. uniprot
Match: D7FMM6_ECTSI (Protease, Ulp1 family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMM6_ECTSI)

HSP 1 Score: 343 bits (879), Expect = 5.860e-102
Identity = 174/274 (63.50%), Postives = 206/274 (75.18%), Query Frame = 3 
Query:   24 ERIPLTWQQQQQVLAAWT-----ADGDINAVAVKAFNDTISKKSMMTLRDGLWLGDEVVNIYMRMLMQRNREAIASGRQVPKCGIMTSFFFTAISDSGAGYRYAGVKNFTRKAKIDLFSLDRFIFPVNVNQTHWTVGVIDFRRQRLEYYDSLPGRGFDILHGFEYMVRFVDDEAKAKRGGVGMDISHWPRVNVARRPMQRNGFDCGVFACMFADRLSKGIPLDFSQSDITHCREVMTLAILRGERSPSEEEILMEGWGSPPGGFA-WWSGDDDD 827
            ER  L+ +Q+ +V  AW+     ADGDI    V+AFND +SK S+ TLR G WLGDEV+N+YM+ L  RNREA+ASG+QVPKCGIM+SFF+T +SD+G GYRY GVK F +KAKIDLF LD+FIFP+NVNQ HWT+ VI+FR +RLEYYDSL G  FD   GFEYM RFVDDE+++KRGG  MDISHWP  N    P QRN  DCGVFA MFADRLSKG PL FSQSDI HCR+V+TLAILRGERSP+E+E  +E  GS  G    WW    D+
Sbjct:  554 ERPELSPEQEDRVRDAWSSQGGAADGDI---VVRAFNDMVSKASLRTLRSGEWLGDEVINLYMKSLQARNREAVASGKQVPKCGIMSSFFYTQLSDNGRGYRYQGVKRFLKKAKIDLFDLDKFIFPINVNQNHWTLAVINFRLERLEYYDSL-GAPFDDA-GFEYMARFVDDESRSKRGGQEMDISHWPSFNYQNVPHQRNEIDCGVFASMFADRLSKGRPLSFSQSDIRHCRKVLTLAILRGERSPTEKEAFLEDGGSVLGEAGEWWEPPQDE 822
[Close]
BLAST of mRNA_F-serratus_M_contig135.2602.1 vs. uniprot
Match: A0A7S2PD21_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2PD21_9STRA)

HSP 1 Score: 169 bits (428), Expect = 1.200e-44
Identity = 88/237 (37.13%), Postives = 138/237 (58.23%), Query Frame = 3 
Query:   33 PLTWQQQQQVLAAWTADGDINAVAVKAFNDTISKKSMMTLRDGLWLGDEVVNIYMRMLMQRNREAIASGRQVPKCGIMTSFFFTAISDSGAGYRYAGVKNFTRK-AKIDLFSLDRFIFPVNVNQTHWTVGVIDFRRQRLEYYDSLPGRGFDILHGFEYMVRFVDDEAKAKRGGVGMDISHWPRVNVAR-RPMQRNGFDCGVFACMFADRLSKGIPLDFSQSDITHCREVMTLAILRG 737
            PLT ++Q  V  A    G  + +   +  DT+ ++SM  L+ G WL DEV++ ++  L +R+ +         +     SFF + + D  +GYRY  VK +++K A  D+F+LD+ +FP+NV   HWT  V   + +++++YDS+ G G   ++G   ++R+ +DE K K+    +D S W  V+     P Q NGFDCGVF CMFAD LS+ +PL FSQ  +T CRE + L+I+ G
Sbjct:    2 PLTEKEQSIVQTAIFGMGPPSEILATSDTDTVQRESMRRLQPGQWLNDEVIHYFLLCLARRDEQMCKKDTNRKRSHFFKSFFVSKLMDEASGYRYQNVKRWSKKVAGKDVFALDKIVFPINVGGVHWTCAVAFMQEKKIQFYDSMGGGGQRYVNG---LLRYFEDEHKDKKK-ASLDTSEWNLVSCQPDTPQQLNGFDCGVFTCMFADFLSRDMPLIFSQEHVTECRERIALSIMNG 234
[Close]
BLAST of mRNA_F-serratus_M_contig135.2602.1 vs. uniprot
Match: A0A7S2V080_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V080_9STRA)

HSP 1 Score: 166 bits (421), Expect = 2.680e-43
Identity = 87/221 (39.37%), Postives = 131/221 (59.28%), Query Frame = 3 
Query:   84 GDINAVAVKAFNDTISKKSMMTLRDGLWLGDEVVNIYMRMLMQRNREAIA-SGRQVPKCGIMTSFFFTAISDSGAGYRYAGVKNFTRKAKIDLFSLDRFIFPVNVNQTHWTVGVIDFRRQRLEYYDSLPGRGFDILHGFEYMVRFVDDEAKAKRGGVGMDISHWPRVNVAR-RPMQRNGFDCGVFACMFADRLSKGIPLDFSQSDITHCREVMTLAILRGE 740
            G  + V     N  + ++ +  L   +WL DEV+N+Y+ +L  R +  +A SGR  P+   M SFF   +     GYRYA V+ +TR+ K+D+FS +R + PVNV   HW +  +   ++R++YYDS+ G G + L     + +++ DE K K+    +DI+ W  V   +  P Q NG DCGVFACMFAD +S+G+PL FSQ D+   RE + LAIL+G+
Sbjct:   52 GPPSQVVANLHNVQLQREKIKCLEPTVWLLDEVINLYINLLEDREKRHMAESGRTTPRAVFMNSFFMARLFVD-EGYRYANVRRWTRRRKLDVFSAERVVVPVNVGNMHWCLACVHVPQKRIQYYDSMGGAGRNYLGA---LAQYLQDEMKDKKKET-LDINDWEMVGTVQGTPQQNNGCDCGVFACMFADYVSEGLPLSFSQKDMPLFREKIALAILQGK 267
[Close]
BLAST of mRNA_F-serratus_M_contig135.2602.1 vs. uniprot
Match: A0A7S3Q661_9STRA (Hypothetical protein n=4 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3Q661_9STRA)

HSP 1 Score: 169 bits (429), Expect = 5.160e-42
Identity = 89/210 (42.38%), Postives = 125/210 (59.52%), Query Frame = 3 
Query:  120 DTISKKSMMTLRDGLWLGDEVVNIYMRMLMQRNREAIASGRQVPKCGIMTSFFFTAISDSGAG--YRYAGVKNFTRK-AKIDLFSLDRFIFPVNVNQTHWTVGVIDFRRQRLEYYDSLPGRGFDILHGFEYMVRFVDDEAKAKRGGVGMDISHWPRV-NVARRPMQRNGFDCGVFACMFADRLSKGIPLDFSQSDITHCREVMTLAILRG 737
            D++ + SM TLR G WL DEV++ +  ML +R+    A+     +     SFFFT + D G    YRYA VK ++R+ A  D+F+LD+  F  NVN  HWT  VI  + +R++Y+DS+ G G+    G   +++++ DE K K+GG   D   W  + +    P QRNGFDCGVF CMFAD LS   PL F+Q  I  CRE + L+IL+G
Sbjct:  301 DSVQRSSMQTLRTGTWLNDEVIHYFFLMLSKRDEALCATDSSRKRSHYFKSFFFTKLFDEGGTNEYRYANVKRWSRRVAGKDIFALDKIFFACNVNGMHWTCAVIFMQEKRIQYFDSMRGDGYMYSEG---LLKYIMDEWKTKKGGSFPDADKWKIIGSKGDVPTQRNGFDCGVFTCMFADFLSLDRPLSFTQEHIDQCRERIALSILKG 507
[Close]
BLAST of mRNA_F-serratus_M_contig135.2602.1 vs. uniprot
Match: A0A7S2SGX6_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2SGX6_9STRA)

HSP 1 Score: 163 bits (413), Expect = 8.890e-42
Identity = 91/241 (37.76%), Postives = 137/241 (56.85%), Query Frame = 3 
Query:   33 PLTWQQQQQVLAAWTADGDINAVAVKAFNDTISKKSMMTLRDGLWLGDEVVNIYMRMLMQRNREAIASGRQVPKCGIMTSFFFTAISDSGAG--YRYAGVKNFTRKAK-IDLFSLDRFIFPVNVNQTHWTVGVIDFRRQRLEYYDSLPGRGFDILHGFEYMVRFVDDEAKAKRGGVGM-DISHWPRVNVARR--PMQRNGFDCGVFACMFADRLSKGIPLDFSQSDITHCREVMTLAILRG 737
            P T Q+   V  A    G    +      D +S+ S+ TL+ G WL DEV++ + +M+   NR+A  +     +C    SFF T + D GA   YRYA VK ++++    D+F+LD+  FPVNV   HW   VI   ++R+ +YDS+ G      +  + + +++ DE + K+GG  M +I  W  +   R   P QRNG+DCGV+ACMFAD +S+ +PL FSQ+ IT CR+ + L+IL G
Sbjct:   59 PFTDQENNLVKHAMYKIGSPEDILATDEGDQVSRLSLQTLQPGQWLNDEVIHYFYKMMA--NRDAKNNKNNNKRCHFFKSFFLTKLLDEGATNKYRYANVKRWSKRVPGKDIFNLDKIFFPVNVGNVHWACAVIFMTKKRIVFYDSMGGGAVAGKYVLQALKKYLQDEWQDKKGGPTMPNIQDWELIPNQRDKVPQQRNGYDCGVYACMFADFISRDVPLLFSQTHITECRKRIALSILTG 297
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BLAST of mRNA_F-serratus_M_contig135.2602.1 vs. uniprot
Match: A0A7S1ZTB6_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1ZTB6_9STRA)

HSP 1 Score: 169 bits (429), Expect = 7.560e-41
Identity = 91/241 (37.76%), Postives = 132/241 (54.77%), Query Frame = 3 
Query:   36 LTWQQQQQVLAAWTADGDINAVAVKAFNDTISKKSMMTLRDGLWLGDEVVNIYMRMLMQRNREAIASGRQVPKCGIMTSFFFTAISDSGAG-----YRYAGVKNFTRKAK-IDLFSLDRFIFPVNVNQTHWTVGVIDFRRQRLEYYDSLPGRGFDILHGFEYMVRFVDDEAKAKRGGVGMDISHWPRVNVAR-RPMQRNGFDCGVFACMFADRLSKGIPLDFSQSDITHCREVMTLAILRG 737
            LT ++   V  A   +G  N +  +   DT+ + SM TLR G WL DEV++ ++ ML +R+ +  A+ +   +C    SFF T + D G       Y Y  VK ++++    DLF LD+  FPVN    HW   V+    +R+++YDSL G G   L G   + +++ DE KAK+G    D   W  V      P Q+NG+DCGVF CM++D LSK  PL FSQ  IT CR+ + L+I+ G
Sbjct:  488 LTKEEVSIVKNAMYGNGQGNEILARCDADTVQRDSMQTLRPGQWLNDEVIHYFLLMLSKRDEQMCAADKTRKRCHFFKSFFITKLFDEGNAATQGKYNYNNVKRWSKRVPGKDLFKLDKIFFPVNAGGVHWCCAVVFMAEKRIQFYDSLGGGGMTYLRG---LFQYLKDEHKAKKGCPLPDEDKWELVTCTEDTPFQQNGYDCGVFTCMYSDFLSKDCPLKFSQHHITQCRQRIALSIMNG 725
[Close]
BLAST of mRNA_F-serratus_M_contig135.2602.1 vs. uniprot
Match: A0A0N7L7Z0_PLAHL (ULP_PROTEASE domain-containing protein n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0N7L7Z0_PLAHL)

HSP 1 Score: 164 bits (416), Expect = 2.480e-40
Identity = 90/230 (39.13%), Postives = 133/230 (57.83%), Query Frame = 3 
Query:   81 DGDINAVAVKAFNDTISKKSMMTLRDGLWLGDEVVNIYMRMLMQRNREAIASGRQVPKCGIMTSFFFTAISDSGAGYRYAGVKNFTRKAKIDLFSLDRFIFPVNVNQTHWTVGVIDFRRQRLEYYDSLPGRGFDILHGFEYMVRFVDDEAKAKRGGVGMDISHWPRVNVA-RRPMQRNGFDCGVFACMFADRLSKGIPLDFSQSDITHCREVMTLAILRGERSPSEEEIL 767
            +G I  V V+ +N TI+++ +  L    WL DEV+N Y++M+ +R+ E + +G    +     SFF+T +S++G  Y Y  V+ +TRK  ID+F++D+  FP+NV   HW + VI    +R++YYDS+ G G   L   + ++R++ DE++ KR     D   W  V      P Q+NG DCGVF+CMFAD LS   PL F Q DI   R  M L + RG   P EE+ L
Sbjct:  279 EGSIEEVLVEKYNVTITRRHLQCLLPTTWLNDEVINFYLQMMSERDEELVKAGHLAKRSHFFNSFFYTKVSENG--YNYINVRRWTRK--IDVFAMDKIFFPINVANMHWCMAVIFMTEKRIQYYDSMHGSGASCL---KVLLRYLHDESEHKRKEKFNDEG-WELVTTTFDTPQQKNGSDCGVFSCMFADYLSLNKPLSFVQKDIPFHRHRMVLHVSRGY-IPLEEDGL 499
[Close]
BLAST of mRNA_F-serratus_M_contig135.2602.1 vs. uniprot
Match: A0A7S1BEB7_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BEB7_9STRA)

HSP 1 Score: 166 bits (419), Expect = 4.490e-40
Identity = 97/247 (39.27%), Postives = 142/247 (57.49%), Query Frame = 3 
Query:   12 RLQTERI--PLTWQQQQQVLAA-WTADGDINAVAVKAFNDTISKKSMMTLRDGLWLGDEVVNIYMRMLMQRNREAIASGRQVPKCGIMTSFFFTAISDSGAGYRYAGVKNFTRKAK-IDLFSLDRFIFPVNVNQTHWTVGVIDFRRQRLEYYDSLPGRGFDILHGFEYMVRFVDDEAKAKRGGVGMDISHWPRV-NVARRPMQRNGFDCGVFACMFADRLSKGIPLDFSQSDITHCREVMTLAILRG 737
            RL  ER   PLT  +Q QV A  +   G    +   +  D++ + S+  LR G+WL DEV++ ++ ML +R+     S     +     SFF T + D   GY Y+ VK +++K    D+F LD+ I PVNV+ +HWT  VI  +++R++YYDS+   G D L G   ++R++ DE KAK+  V +D S W  V +    P Q NG+DCGVF CMFAD +S+   L F+Q  +T CRE + L+IL G
Sbjct:  358 RLALERALRPLTSDEQNQVHAIIFGRKGQGTDIIATSETDSVQRDSLRRLRPGVWLNDEVIHYFLLMLARRDEAICRSDPSRRRSHFFKSFFVTKLLDE-RGYCYSNVKRWSKKVPGKDIFLLDKIICPVNVHNSHWTCAVIFVKKKRIQYYDSMGAPGLDTLKG---LLRYLVDEYKAKKNKV-LDTSEWKLVPSEPDTPQQANGYDCGVFTCMFADFISRDFALTFTQDHVTECRERVALSILNG 599
[Close]
BLAST of mRNA_F-serratus_M_contig135.2602.1 vs. uniprot
Match: A0A7S0FZ62_9DINO (Hypothetical protein n=1 Tax=Pyrodinium bahamense TaxID=73915 RepID=A0A7S0FZ62_9DINO)

HSP 1 Score: 154 bits (389), Expect = 2.770e-39
Identity = 79/227 (34.80%), Postives = 124/227 (54.63%), Query Frame = 3 
Query:   81 DGDINAVAVKAFNDTISKKSMMTLRDGLWLGDEVVNIYMRMLMQRNREAIASGRQVPKCGIMTSFFFTAISDS-GAGYRYAGVKNFTRKAKIDLFSLDRFIFPVNVNQTHWTVGVIDFRRQRLEYYDSLPGRGFDILHGFEYMVRFVDDEAKAKRGGVGMDISHWPRVNV-ARRPMQRNGFDCGVFACMFADRLSKGIPLDFSQSDITHCREVMTLAILRGERSPSE 755
            +G+ + +    FN  + +  +  LR G WL DEV+N Y ++L +R+++     +  PKC    SFF+  +S      Y +  V+ +T KAK+D+F  D  IFP+N+ +THW +G ID R +   Y+DS+  R       F  + R+V DE KAK+GG    +  W  +   A  P QRNG+DCGVF C FA+  S G  L+F Q D+ + R  +   +++ + +  E
Sbjct:    8 EGNPDEILASRFNVELKRSQLECLRPGEWLNDEVINFYFKLLQERSKKT----KGAPKCWFTNSFFWPKLSGKRNEEYNFKEVRRWTTKAKVDVFDQDYVIFPMNIGETHWAMGAIDLRSKGFRYFDSMFSRPHKNFVPF--LRRYVGDEHKAKKGGPLDGLDEWDLLKPEAPVPQQRNGYDCGVFTCSFAEWFSSGRALEFDQDDMPNLRLRLAARVIKADENWDE 228
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig135.2602.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JUU7_9PHAE2.280e-10764.23ULP_PROTEASE domain-containing protein n=1 Tax=Ect... [more]
D7FMM6_ECTSI5.860e-10263.50Protease, Ulp1 family n=1 Tax=Ectocarpus siliculos... [more]
A0A7S2PD21_9STRA1.200e-4437.13Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
A0A7S2V080_9STRA2.680e-4339.37Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa... [more]
A0A7S3Q661_9STRA5.160e-4242.38Hypothetical protein n=4 Tax=Chaetoceros debilis T... [more]
A0A7S2SGX6_9STRA8.890e-4237.76Hypothetical protein n=1 Tax=Eucampia antarctica T... [more]
A0A7S1ZTB6_9STRA7.560e-4137.76Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A0N7L7Z0_PLAHL2.480e-4039.13ULP_PROTEASE domain-containing protein n=1 Tax=Pla... [more]
A0A7S1BEB7_9STRA4.490e-4039.27Hypothetical protein n=1 Tax=Corethron hystrix Tax... [more]
A0A7S0FZ62_9DINO2.770e-3934.80Hypothetical protein n=1 Tax=Pyrodinium bahamense ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig135contigF-serratus_M_contig135:57105..63538 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score315.1
Seed ortholog evalue3e-83
Seed eggNOG ortholog2880.D7FMM6
KEGG koko:K07277,ko:K08592
KEGG TC1.B.33
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0004175,GO:0004197,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005911,GO:0006464,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008234,GO:0009506,GO:0009909,GO:0009911,GO:0009987,GO:0016787,GO:0016926,GO:0016929,GO:0018193,GO:0018205,GO:0019538,GO:0019783,GO:0030054,GO:0036211,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044464,GO:0048518,GO:0048580,GO:0048582,GO:0048831,GO:0050789,GO:0050793,GO:0051094,GO:0051239,GO:0051240,GO:0055044,GO:0065007,GO:0070011,GO:0070122,GO:0070137,GO:0070138,GO:0070139,GO:0070140,GO:0070646,GO:0070647,GO:0071704,GO:0140096,GO:1901564,GO:2000026,GO:2000241,GO:2000243
EggNOG free text desc.protein modification by small protein removal
EggNOG OGsCOG5160@1,KOG0778@2759
EC3.4.22.68
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko01002,ko02000,ko03029,ko04121
Exons9
Model size2017
Cds size747
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929332.921264-UTR-F-serratus_M_contig135:57104..571631622929332.921264-UTR-F-serratus_M_contig135:57104..57163Fucus serratus maleUTRF-serratus_M_contig135 57105..57163 +
1690962802.472851-UTR-F-serratus_M_contig135:57104..571631690962802.472851-UTR-F-serratus_M_contig135:57104..57163Fucus serratus maleUTRF-serratus_M_contig135 57105..57163 +
1622929332.9629226-UTR-F-serratus_M_contig135:57759..578401622929332.9629226-UTR-F-serratus_M_contig135:57759..57840Fucus serratus maleUTRF-serratus_M_contig135 57760..57840 +
1690962802.483948-UTR-F-serratus_M_contig135:57759..578401690962802.483948-UTR-F-serratus_M_contig135:57759..57840Fucus serratus maleUTRF-serratus_M_contig135 57760..57840 +
1622929333.1098585-UTR-F-serratus_M_contig135:62408..635381622929333.1098585-UTR-F-serratus_M_contig135:62408..63538Fucus serratus maleUTRF-serratus_M_contig135 62409..63538 +
1690962802.580084-UTR-F-serratus_M_contig135:62408..635381690962802.580084-UTR-F-serratus_M_contig135:62408..63538Fucus serratus maleUTRF-serratus_M_contig135 62409..63538 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929332.9759436-CDS-F-serratus_M_contig135:57840..578791622929332.9759436-CDS-F-serratus_M_contig135:57840..57879Fucus serratus maleCDSF-serratus_M_contig135 57841..57879 +
1690962802.4942935-CDS-F-serratus_M_contig135:57840..578791690962802.4942935-CDS-F-serratus_M_contig135:57840..57879Fucus serratus maleCDSF-serratus_M_contig135 57841..57879 +
1622929332.9903789-CDS-F-serratus_M_contig135:58408..584821622929332.9903789-CDS-F-serratus_M_contig135:58408..58482Fucus serratus maleCDSF-serratus_M_contig135 58409..58482 +
1690962802.5022888-CDS-F-serratus_M_contig135:58408..584821690962802.5022888-CDS-F-serratus_M_contig135:58408..58482Fucus serratus maleCDSF-serratus_M_contig135 58409..58482 +
1622929333.0071177-CDS-F-serratus_M_contig135:58954..590511622929333.0071177-CDS-F-serratus_M_contig135:58954..59051Fucus serratus maleCDSF-serratus_M_contig135 58955..59051 +
1690962802.510059-CDS-F-serratus_M_contig135:58954..590511690962802.510059-CDS-F-serratus_M_contig135:58954..59051Fucus serratus maleCDSF-serratus_M_contig135 58955..59051 +
1622929333.0237007-CDS-F-serratus_M_contig135:60347..603981622929333.0237007-CDS-F-serratus_M_contig135:60347..60398Fucus serratus maleCDSF-serratus_M_contig135 60348..60398 +
1690962802.5205057-CDS-F-serratus_M_contig135:60347..603981690962802.5205057-CDS-F-serratus_M_contig135:60347..60398Fucus serratus maleCDSF-serratus_M_contig135 60348..60398 +
1622929333.044658-CDS-F-serratus_M_contig135:60682..607811622929333.044658-CDS-F-serratus_M_contig135:60682..60781Fucus serratus maleCDSF-serratus_M_contig135 60683..60781 +
1690962802.5284593-CDS-F-serratus_M_contig135:60682..607811690962802.5284593-CDS-F-serratus_M_contig135:60682..60781Fucus serratus maleCDSF-serratus_M_contig135 60683..60781 +
1622929333.0653076-CDS-F-serratus_M_contig135:61160..612841622929333.0653076-CDS-F-serratus_M_contig135:61160..61284Fucus serratus maleCDSF-serratus_M_contig135 61161..61284 +
1690962802.5427253-CDS-F-serratus_M_contig135:61160..612841690962802.5427253-CDS-F-serratus_M_contig135:61160..61284Fucus serratus maleCDSF-serratus_M_contig135 61161..61284 +
1622929333.0863247-CDS-F-serratus_M_contig135:61732..617941622929333.0863247-CDS-F-serratus_M_contig135:61732..61794Fucus serratus maleCDSF-serratus_M_contig135 61733..61794 +
1690962802.5534694-CDS-F-serratus_M_contig135:61732..617941690962802.5534694-CDS-F-serratus_M_contig135:61732..61794Fucus serratus maleCDSF-serratus_M_contig135 61733..61794 +
1622929333.0996816-CDS-F-serratus_M_contig135:62207..624081622929333.0996816-CDS-F-serratus_M_contig135:62207..62408Fucus serratus maleCDSF-serratus_M_contig135 62208..62408 +
1690962802.564516-CDS-F-serratus_M_contig135:62207..624081690962802.564516-CDS-F-serratus_M_contig135:62207..62408Fucus serratus maleCDSF-serratus_M_contig135 62208..62408 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig135.2602.1prot_F-serratus_M_contig135.2602.1Fucus serratus malepolypeptideF-serratus_M_contig135 57841..62408 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig135.2602.1

>prot_F-serratus_M_contig135.2602.1 ID=prot_F-serratus_M_contig135.2602.1|Name=mRNA_F-serratus_M_contig135.2602.1|organism=Fucus serratus male|type=polypeptide|length=249bp
MMTLRDGLWLGDEVVNIYMRMLMQRNREAIASGRQVPKCGIMTSFFFTAI
SDSGAGYRYAGVKNFTRKAKIDLFSLDRFIFPVNVNQTHWTVGVIDFRRQ
RLEYYDSLPGRGFDILHGFEYMVRFVDDEAKAKRGGVGMDISHWPRVNVA
RRPMQRNGFDCGVFACMFADRLSKGIPLDFSQSDITHCREVMTLAILRGE
RSPSEEEILMEGWGSPPGGFAWWSGDDDDYEPRYGGGQLGPEPWANGF*
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mRNA from alignment at F-serratus_M_contig135:57105..63538+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig135.2602.1 ID=mRNA_F-serratus_M_contig135.2602.1|Name=mRNA_F-serratus_M_contig135.2602.1|organism=Fucus serratus male|type=mRNA|length=6434bp|location=Sequence derived from alignment at F-serratus_M_contig135:57105..63538+ (Fucus serratus male)
TTGGGGTGCGGCGACTGCAAACAGAGCGTATCCCTTTGACGTGGCAACAG
CAACAGCAGGTAAGGCCGACGGACAGTCATCGATATCAATTAGCCCCGAG
CCTGGGGGGGGTGGGGGTGGCAGGGGCGGAAGTCATGCTATCCTTTCCTA
GCTCAGCTTCGTCCGTGAGCTCATGTTGTGTAGAACATCGAGAGCTGGAG
CAGCAACTATGCCAAGCGGTGTAATGTGTAGATGGTCGGAGGGTCTTCTG
TACAGTATACAGTATCGATCGTTTCGATAGGGCTGTAGGACACACTCTCG
ACGGCAGACGGTTACACGACCAGTGGGGGAACCACCTGCAATCTGACTGG
TTCGACCGTCCACACTATTTTACGTGGCCGACGTTTCGCCTGGGAGTTCC
ACTCGTCATGGGAGACGGCATGGCTTCCAGCGGATCTCAAGGCGATGTTT
CTGGTTAAAGGTTTTTAGGCAACACTTTGCGTAGCAGTCTGTTCGACGCC
GGAAACCTTTCAGTAACCATATCTGGATTGCCTGTTTTAAAAAGATGAAC
CCAAATCCAACACATGGTAGTGCACCAGAAGATTGTGAGCGCTTCTCAGG
AGTAAATGCTACTTTACGTTCATGTCGTGCGTTTTTCTGTTGCTTTTGAG
AGAAGGTGCTTGCGGCCTGGACGGCCGACGGGGATATAAATGCTGTTGCG
GTGAAAGCGTTCAACGACACTATTTCGAAGAAATCAATGATGACTCTCCG
AGACGGCCTGTGGCTTGGGGACGAGGTAGACTTACCGGGGGGGTGGGGGA
GGGAGGGGGGCTATCAGAGCTCTCCCCTCTCTTGCGCTCCTCAAATACTC
TTGTATTAGTGTACACAGCCAAGACTTGTTTCAAGCGGAGTCATCGGTGT
CCGTGATTTCGTTATCGTGTAGAGGCTATTTTATCGCGTGTACACCGATG
ATTTTGGACCAAAACAATATAGAGTACCTGGTAGGTATCGTATCGCCCGC
TGGTCACTTAGCTCCAGAGGATTCGTAGAGCCTAAGCACATTTTCTCGAC
TTTCAAGCACGAAATGCAAATCCCGTCGCACTCGCCTTTCCAACAACGAA
AGGGAACCGTATCCGTTCCGCCGCAGCTGTATAACGAGAGGTACATACTA
TGTAGGCGTATTGCCGTGCATCTCTACCTGTAGAGGTGTCTGTAGAGTTG
CCCGTAGAGTTAGCTGTATAATGGGAGGTGGCGGAAGGCGAAGACCTCGA
TGATCGGTTTGCGTTGTGTGTTTGTTCGTTCGCCTCTCGGCTTGTCCGCC
TCAGGTGGTAAATATCTATATGCGGATGCTTATGCAGAGAAATAGGGAGG
CCATCGCTTCCGGGCGACAGGTCCCAAAGTAAGTACCAAGTACTTGAAAT
CGCGCTGGTACCTGCGGCGATACCTGTGTACTGTGGGTGCCGGCGATGTT
GGTGTCGAGATGTTAATGTTATGGTCGTCTATGGTACAAGTATTGATAAT
GCCGATCGATGTTCGACATGTGGTTCAGCTAATTTATACTCGAGTATCAC
TTATTCATACCGGGTATTGGGTGTTGAAGGTGATAGTATGCCTGTGTTGG
AGGACTGTCAAGAAAAATATAGAAAACTTCAATTATTGCGGGGCGCCCGT
GTCAGATTCCCGTCGAGTAGACAGGAGTTAAGTTGTCGCGGCGATAATCA
TCGCCCTGACCAGCCTCATCTCATGTCATGGACGTTGTCGAGATCGTGCT
GTATTTCGTGACTCCGACAGTACTCTCAAAGGACATCTAAGGTACACAGT
ACATCACGAACTTTTGATAACTGCACGTACGCTACGCTACGTTATCGCAG
ATGCGGAATCATGACCAGTTTCTTCTTCACTGCGATCTCGGATTCCGGAG
CCGGCTATAGGTACGCTGGAGTCAAGAACTTTACGAGGAAGGCCAAGGTG
ATTCCCTGGCGGGGGGGGGGTAGTTGAGATGTATTCCCGAGCGCGTTGAC
GCTGCTCTGGCTGTATGACTAGTAACTAAATGTATCATGTGTCTACTAAT
GGAGCTATCATACGGACGCTGTTCGGTGACAGCAGTTGGGCCCACTGCAT
GACCGCCATTTTTAATTTAATTTTATGCCCTCTCGGGGGTGAGGAGTTAT
TAATAGTTAAAAATAGTCCATCCCGACGCTGTTGTCTGACACGCTTCTTG
GCGCCCAAACACTGTTGCTACATTCGCATCAGCGTCCGAAGCATGAGCAC
GTTGATGCCCTCTTGAGCCATAGTCTCCTTCCTCACACGGTCATAGTCTA
CCCTTGTGCAGCACACAGTCAGCCCAATAGTCGACCGACAGACTCAGCGA
GATCGTAAGAGGAGCTGTCTGGGCCACATAGCCCGATGTGGTCACTTCGA
AAAACTTCCAAAAGTTTCAATTTCCCCTTTGTCTCGCCCTTCCCTCACCT
TCCTTCTCTTTCCAAATTTTGGCGGTCAAGTTCTGACGATGCAAAGCTCT
CTCTTAGAAACTTTCCTATATCCCCCAAGACATGTCAGGCCATCCTTTCA
CCTCTGGGGAGGCCGTGTCGACCCAGCACTTGTATACTGTCTTATTGTCA
AATTGAATCAAATCAATGATATTAGTATTTCAAGGGTAACGGCACATCTC
CTGGCCGCCGCCGCCCAACAGTGTTACGCCATCATTTCTGTTGCTGGTTA
TCTCACATTAACTGATCCGCTACGAATTCAGCCGTGGTCACAAGGTAGAC
GGAATCAAACCAAACCAAACAAACGAAATAAAACAAAATAGGCTTCAAAA
TAGACACCATACACCGTTGTCGTCCGTAGTTTGGGAGGCGTTTGGGAGGC
ATGAAACAGACGTCTCCGGGCGCTGCGCCCTATTAATCAATACCTGGTAT
GAATAGTGCTATTTTTCCACCGAGGCGCTGGCGGCTCTATGCTAATAATA
TTAAATATGATTGCCACTATATTCACCTCCTTAACAAGTAAAATTCAAGG
CCGTGTTCTTCCCTCGAAACATTTGGTTGTTCCACCCCCTATAGGGAGGG
ACTATGATATATAGGGAACATAGAGAATATAACATGGCGTATTAGTAATA
GTATCACTAGAGCCTATGCATCCAAAGGCAGGGAAGGGTACACGCTGACT
CGTCCAAAAAATGCCTCCTTGTACTAACTACAAAATTGAACCGATTTTAA
CTCATGAACGCGTACGTACGTCATGCGTAATGGGCTGGAGCAGATCGATC
TCTTCAGCCTGGACAGGTTCATATTTCCTGTCAACGTCAACCAGGTGCGT
AGAGGGGTATCGCACGGATCTATAGGTCTATCTATCTAGCCCTTCGCTTT
TCCATCCGCCATTGCCTCGTCTGGCATACTTTGCTTGGACCCTCCCGTCT
TTTTCTGTCCCATTTTCTTCTTGCTTTTTTCATTTTCTGGTGCTGCTTGC
TGCTTCTATTTGTCGGGGGCAAAGAACTCGACCCGAGCTTAAGAGGGACT
CTCAAGTATACAATGCATAGACAGACAGACGTATGTACACGAAGAAGTTA
ACGGCGGCGATGTTTTCTCAATTTGCAGACTCACTGGACGGTCGGTGTTA
TCGACTTCCGCCGCCAGCGGCTGGAGTATTATGACTCCCTCCCAGGCCGA
GGATTCGACATCCTCCATGGGTTTGAGGTGAGGTCTGAGGTTGCTACAAA
CTCCGCCGTAGCAAATAGCGAGCGCTGTTGTTTGGTATCTCGAAGTCATG
AAGACCACCTCTGGCCAACACAGCAGTAGCTAGCTATTATTATAATAGGC
TGGGAATACCGCGATCGACACTCCCAGACATGACGAGAGCCTGCGATCGG
CACTCGAGGAAGAAACGTGTGTGAACATTTCCCGTGGTGCACATGGAGGG
GGGTTGCCGAGAAACAATTTCATTGGACAATGTCCACGCGCAGTTCGACG
GCCACCAACTGCCGGTGGTTGCTCAACTGCTGTACTCATGATAACTTCTA
TTATCTTATCTCATTATTTTTTCCCCCTTATCACTCGTTGTTGGCGCGAC
CCACAGTACATGGTCAGATTCGTCGACGACGAGGCCAAGGCCAAGCGGGG
CGGGGTGGGAATGGACATTTCCCACTGGCCTCGGGTCAACGTCGCACGGA
GGCCAATGCAGCGGAACGGCTTCGACTGCGGTAGGTTTTGCGGCCCGTAG
GCGTTGTTACCACCTTTCGCCGTCGCCGCCGACTACGTTTTCAAATTTCA
ATACAGTACATAACCCTACCTGTCTGCGGTTTGACTCGCGCCTTAACGGC
GCATACGCACCGCGCGATCTTTCCTCGACGTAAAATGAGGCGGATCCAGG
CGGGAGTTCCATGGCCTCCCCCCCCCCCCCCCCGTCCTGTCCCATCCCCC
TCAAGTCTCGATGAAACCTGAATCCACCGTGAGCAGTAGGTGGCACTAAT
ATTATAGTACGAACGTTGGCGGACATTACTAGCTACTTGAAGCGTGGTGA
TGGTTGTAGCATGTGCCGCAACGTGTTTTCTTGCCAGTAACTGCGAGGTC
ACTAAGCTGCGATATTCCTCCTCTCTCTCTCTGCCCACGTGCGCTCCTGG
AATTGCGATCCTTGTGCACGCGTCGCAGGCGTGTTCGCCTGTATGTTCGC
CGATCGCCTCAGCAAGGGGATACCGCTCGACTTTTCTCAGGCGAGGGGAT
ACGGCTTTCTCTGTTGTTGAGCTTGATAAAAAACGTGAAATCCCCTTATT
TTTCTTAATATCGTGTGGTGCATCGATCAGCCCTCTCGTGACTCTGTTCG
AGCGCTTCCTGCCCTGTCGCTGCGCGAATATGGAAACCTACGATTTGCCA
TTTCCAACCGCCGACTCCTTGAGACGGGCTCATGACTCATGGACCCGGAT
GTGTCCGTGATGGATCCGTTCCTTTACTCGGCGATTTCGTGATCGATCGC
TCGAGATACTCTTATTTACTCTCCCGCAATGCTACTGTACGGTACACCAC
CTATCTAACCCATCTAACCCATCTAACTTACCCTGGACTTCTTGCCCCTT
GCCACGATCACGTTGACTCTAATAACAATACAATACAATCACAAAATGAA
AAGAGCGACATCACCCACTGCCGTGAGGTGATGACGCTAGCAATTCTCCG
AGGCGAGCGGTCTCCCTCGGAAGAGGAAATATTAATGGAAGGCTGGGGAA
GCCCGCCCGGAGGGTTCGCGTGGTGGTCTGGGGACGATGACGATTACGAG
CCACGGTATGGCGGCGGGCAGCTGGGGCCGGAGCCTTGGGCAAATGGCTT
CTAGCAACTTGGTGTGGTGCGCTATTTTCCCATCACCGAGTGCGTTGGAT
ATGTGAACGTTTGTGCTGTTGTTAGTATATGAATCATCAATCAATGCTCA
CTGGATATTCAGGAATAAGTACTCCATAACAGGAGGAGACACGATCGCTG
AAAAAGCTGCTGGAGACGAGGCGACTGTCTGGATAACCTGAACATTTGGT
TCAGGTACTCTCGTACACCGTAACGTTTCAGCAGAGCAGATAAAAATGAA
TGCATTTACACCGGTACCTAAACGGTGAAATAGAATATCGTAGTCTGAAG
TTGAATGGAGAGTTCATTTGGATCGCTGTCATTGCTGCTGGACTAACCAA
GGCCTCGAACAGGCGTTGCTGCGATAAGAGGGTAGGGTACAAGAACGGAG
AAGTGCTTTATGACGCTCCAAAGATTGCGTGTGTTGTCATTGGCCTCGGG
AGAAAGTAAGGCTCATGGTAGAATACCGGTACAGGCGTTTGGTATTCGCT
TTAACATGGAATTGCTCATGAGGCTACTGTACGCTCTTGAAGCACGATAT
TTTACTTTGTTTATATTTTTGTTGTACTACAGAGATGTAGAACGGCATCC
TCATAGTGACACTGCTGTACTAGGTGGAACGCAGATTTTGTACCCGGAGG
ATGCTTGGGGACTGCAGGCGCCGCTCGCTGTGGTCCTGTGATAATGTGAA
ATGCCCTGACGCACCAAACTGCGCGCTGACATTGCGCCAAGATTTTGCAG
GTGGAGTAGGATACATGTATCAGATATCATGGACATGTCATAGTCCTGTC
ATAGGAGGTAGAACAGGGAGAAGAAGATCAAAGAAAGGGTTGGGAGGAAG
AATCGTGATGTTGAGGGTATCTATAATATTAAGTTACAAGGCGTCGTAGT
ATTATTAGTAGGGCGGGAGGTCATTAGGAGTACTGCACTGCACGAACTTG
GCCATGTTGTGCCCTGAGAGGACTGACTGTATGGACGGTAGTGTGTTCGC
AGTAGTCTAGTGTTGTGTTCGAGCTCCCCTACGTCTTGACGCGCGCGGTA
TCGATGCGTGAGTGACTGTTGATGTTTTACAACTATTATGCCACTGCTAC
CGTAACGATGATTACTACGGGTGATCCCGTCTCG
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Coding sequence (CDS) from alignment at F-serratus_M_contig135:57105..63538+

>mRNA_F-serratus_M_contig135.2602.1 ID=mRNA_F-serratus_M_contig135.2602.1|Name=mRNA_F-serratus_M_contig135.2602.1|organism=Fucus serratus male|type=CDS|length=1494bp|location=Sequence derived from alignment at F-serratus_M_contig135:57105..63538+ (Fucus serratus male)
ATGATGACTCTCCGAGACGGCCTGTGGCTTGGGGACGAGATGATGACTCT
CCGAGACGGCCTGTGGCTTGGGGACGAGGTGGTAAATATCTATATGCGGA
TGCTTATGCAGAGAAATAGGGAGGCCATCGCTTCCGGGCGACAGGTCCCA
AAGTGGTAAATATCTATATGCGGATGCTTATGCAGAGAAATAGGGAGGCC
ATCGCTTCCGGGCGACAGGTCCCAAAATGCGGAATCATGACCAGTTTCTT
CTTCACTGCGATCTCGGATTCCGGAGCCGGCTATAGGTACGCTGGAGTCA
AGAACTTTACGAGGAAGGCCAAGATGCGGAATCATGACCAGTTTCTTCTT
CACTGCGATCTCGGATTCCGGAGCCGGCTATAGGTACGCTGGAGTCAAGA
ACTTTACGAGGAAGGCCAAGATCGATCTCTTCAGCCTGGACAGGTTCATA
TTTCCTGTCAACGTCAACCAGATCGATCTCTTCAGCCTGGACAGGTTCAT
ATTTCCTGTCAACGTCAACCAGACTCACTGGACGGTCGGTGTTATCGACT
TCCGCCGCCAGCGGCTGGAGTATTATGACTCCCTCCCAGGCCGAGGATTC
GACATCCTCCATGGGTTTGAGACTCACTGGACGGTCGGTGTTATCGACTT
CCGCCGCCAGCGGCTGGAGTATTATGACTCCCTCCCAGGCCGAGGATTCG
ACATCCTCCATGGGTTTGAGTACATGGTCAGATTCGTCGACGACGAGGCC
AAGGCCAAGCGGGGCGGGGTGGGAATGGACATTTCCCACTGGCCTCGGGT
CAACGTCGCACGGAGGCCAATGCAGCGGAACGGCTTCGACTGCGTACATG
GTCAGATTCGTCGACGACGAGGCCAAGGCCAAGCGGGGCGGGGTGGGAAT
GGACATTTCCCACTGGCCTCGGGTCAACGTCGCACGGAGGCCAATGCAGC
GGAACGGCTTCGACTGCGGCGTGTTCGCCTGTATGTTCGCCGATCGCCTC
AGCAAGGGGATACCGCTCGACTTTTCTCAGGCGTGTTCGCCTGTATGTTC
GCCGATCGCCTCAGCAAGGGGATACCGCTCGACTTTTCTCAGAGCGACAT
CACCCACTGCCGTGAGGTGATGACGCTAGCAATTCTCCGAGGCGAGCGGT
CTCCCTCGGAAGAGGAAATATTAATGGAAGGCTGGGGAAGCCCGCCCGGA
GGGTTCGCGTGGTGGTCTGGGGACGATGACGATTACGAGCCACGGTATGG
CGGCGGGCAGCTGGGGCCGGAGCCTTGGGCAAATGGCTTCTAGAGCGACA
TCACCCACTGCCGTGAGGTGATGACGCTAGCAATTCTCCGAGGCGAGCGG
TCTCCCTCGGAAGAGGAAATATTAATGGAAGGCTGGGGAAGCCCGCCCGG
AGGGTTCGCGTGGTGGTCTGGGGACGATGACGATTACGAGCCACGGTATG
GCGGCGGGCAGCTGGGGCCGGAGCCTTGGGCAAATGGCTTCTAG
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