prot_F-serratus_M_contig1349.2595.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig1349.2595.1
Unique Nameprot_F-serratus_M_contig1349.2595.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length212
Homology
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BLAST of mRNA_F-serratus_M_contig1349.2595.1 vs. uniprot
Match: A0A6H5KLX5_9PHAE (HORMA domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KLX5_9PHAE)

HSP 1 Score: 187 bits (476), Expect = 1.640e-56
Identity = 113/212 (53.30%), Postives = 133/212 (62.74%), Query Frame = 0 
Query:    1 MSRHPDLNDYIYQVLLRTKLFISQGIVRKVLVCFFEEGGQHPNHRVHPVEKVAFEVRMDRMDRSSAGKAATHGEASLSRERGQGDSLDQVDQTTLQLQLQEIEEIEDQLRSALLQIGKSSAHLPPRQGCTFALHVQAHE---GVGAEGDEDNKDLPGSVVRSALRGGHWLLADQEAERVQAESGRRHLVPIKSVRSPGLLLDLSTELGDCPI 209
            MSRHP+LN YI +VLLR KL + QG+VR+VLVCFF E  +H +    PVE+VAF+VR+D                         D  D VD T+LQ       ++EDQLRSALLQI KSSAHLP RQGCTFALHV+AHE   G     D        S VRSALRGG W+LAD  A+ V AE GRR +VPIKSVR  GL L+LSTE+GDC +
Sbjct:   52 MSRHPELNAYISEVLLRVKLLMEQGVVRRVLVCFFLEE-EHVDQA--PVERVAFDVRVD------------------------NDGDDSVDSTSLQ-------DVEDQLRSALLQIQKSSAHLPTRQGCTFALHVEAHEDNEGQVGRHDATQDYAQSSPVRSALRGGKWVLADSVAQGVLAEPGRRRIVPIKSVRGRGLSLNLSTEMGDCSV 229
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1349.2595.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KLX5_9PHAE1.640e-5653.30HORMA domain-containing protein n=2 Tax=Ectocarpus... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 95..115
NoneNo IPR availablePANTHERPTHR11842:SF10MITOTIC SPINDLE ASSEMBLY CHECKPOINT PROTEIN MAD2Bcoord: 1..199
NoneNo IPR availablePANTHERPTHR11842MITOTIC SPINDLE ASSEMBLY CHECKPOINT PROTEIN MAD2coord: 1..199
IPR036570HORMA domain superfamilySUPERFAMILY56019The spindle assembly checkpoint protein mad2coord: 1..141

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1349contigF-serratus_M_contig1349:118587..124853 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1349.2595.1mRNA_F-serratus_M_contig1349.2595.1Fucus serratus malemRNAF-serratus_M_contig1349 113170..124856 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig1349.2595.1 ID=prot_F-serratus_M_contig1349.2595.1|Name=mRNA_F-serratus_M_contig1349.2595.1|organism=Fucus serratus male|type=polypeptide|length=212bp
MSRHPDLNDYIYQVLLRTKLFISQGIVRKVLVCFFEEGGQHPNHRVHPVE
KVAFEVRMDRMDRSSAGKAATHGEASLSRERGQGDSLDQVDQTTLQLQLQ
EIEEIEDQLRSALLQIGKSSAHLPPRQGCTFALHVQAHEGVGAEGDEDNK
DLPGSVVRSALRGGHWLLADQEAERVQAESGRRHLVPIKSVRSPGLLLDL
STELGDCPIDC*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036570HORMA_dom_sf