prot_F-serratus_M_contig1348.2589.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig1348.2589.1
Unique Nameprot_F-serratus_M_contig1348.2589.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length166
Homology
[Close]
BLAST of mRNA_F-serratus_M_contig1348.2589.1 vs. uniprot
Match: D7FKG2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKG2_ECTSI)

HSP 1 Score: 131 bits (329), Expect = 1.460e-36
Identity = 69/99 (69.70%), Postives = 80/99 (80.81%), Query Frame = 0 
Query:   68 PNEYEAFFNTACKSGVAVMSKLSPEERAQRALEGEELEDKIIEIATVLREKADTMVADTGAVNFNIIQPMIDEISVLKAKYKLVVGAVTPTDSPPQDGA 166
            PNEYEAFFN A + G      L+PEERAQRA+EGE+LED+IIEIATVLREKAD MVA+TGA+NF IIQPMIDEI+VLK+KYK+V+GA    D    DGA
Sbjct:    2 PNEYEAFFNKASRLGADATRDLAPEERAQRAMEGEKLEDEIIEIATVLREKADEMVAETGAINFEIIQPMIDEIAVLKSKYKVVMGATETADG---DGA 97
[Close]
BLAST of mRNA_F-serratus_M_contig1348.2589.1 vs. uniprot
Match: A0A835YIM3_9STRA (Uncharacterized protein n=3 Tax=Tribonema minus TaxID=303371 RepID=A0A835YIM3_9STRA)

HSP 1 Score: 68.2 bits (165), Expect = 2.890e-12
Identity = 36/73 (49.32%), Postives = 53/73 (72.60%), Query Frame = 0 
Query:   89 LSPEERAQRALEGEELEDKIIEIATVLREKADTMVADTGAVNFNIIQPMIDEISVLKAKYKLVVGAVTPTDSP 161
            +S EER + A+ GEELED+I+  AT LR+ AD+MV  TGAV+   ++P+IDEI  LK +Y+ V+G V  +++P
Sbjct:    1 MSIEERTRLAIIGEELEDEIMSKATALRDLADSMVEQTGAVDEKQLRPLIDEIGELKTQYRAVLGGVVRSNAP 73
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1348.2589.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FKG2_ECTSI1.460e-3669.70Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835YIM3_9STRA2.890e-1249.32Uncharacterized protein n=3 Tax=Tribonema minus Ta... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..14
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..19
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 20..166
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 15..19
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..19
score: 0.864
NoneNo IPR availableTMHMMTMhelixcoord: 5..27

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1348contigF-serratus_M_contig1348:239829..251385 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1348.2589.1mRNA_F-serratus_M_contig1348.2589.1Fucus serratus malemRNAF-serratus_M_contig1348 239829..251412 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig1348.2589.1 ID=prot_F-serratus_M_contig1348.2589.1|Name=mRNA_F-serratus_M_contig1348.2589.1|organism=Fucus serratus male|type=polypeptide|length=166bp
MYVPLLVSCLVLASGLVHAFGGGWVPFAQNGLQGRQAEAWTSRSRDAVNA
AALRLPQRSVPHRFRAHPNEYEAFFNTACKSGVAVMSKLSPEERAQRALE
GEELEDKIIEIATVLREKADTMVADTGAVNFNIIQPMIDEISVLKAKYKL
VVGAVTPTDSPPQDGA
back to top