mRNA_F-serratus_M_contig102.259.1 (mRNA) Fucus serratus male
Overview
Homology
BLAST of mRNA_F-serratus_M_contig102.259.1 vs. uniprot
Match: A0A6H5L2S4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2S4_9PHAE) HSP 1 Score: 89.0 bits (219), Expect = 2.760e-19 Identity = 46/81 (56.79%), Postives = 54/81 (66.67%), Query Frame = 2 Query: 107 GEVADEIALGREHTCVLLSSGDVKCFGYNDKGQLLIGQGDTVSRGELPNQLGDDLPAIDLGTGASAVQVTVGCDHTCVLLD 349 G E+ALG +HTC+LL SGDV CFG ND GQL G GDT +RG++ +G+ A DLG G SAV V GC HTC LLD Sbjct: 19 GGTVAEMALGEDHTCMLLDSGDVVCFGKNDSGQL--GLGDTSTRGQIAGDVGE---AADLGAGLSAVAVAAGCRHTCGLLD 94
BLAST of mRNA_F-serratus_M_contig102.259.1 vs. uniprot
Match: A0A835T669_9CHLO (Uncharacterized protein n=1 Tax=Chlamydomonas schloesseri TaxID=2026947 RepID=A0A835T669_9CHLO) HSP 1 Score: 92.0 bits (227), Expect = 3.990e-19 Identity = 45/81 (55.56%), Postives = 56/81 (69.14%), Query Frame = 2 Query: 107 GEVADEIALGREHTCVLLSSGDVKCFGYNDKGQLLIGQGDTVSRGELPNQLGDDLPAIDLGTGASAVQVTVGCDHTCVLLD 349 G A I+ G HTC LL +G +KC+GYN+ GQL G GDT SRG+ P ++GD LPAI LGTG +A ++VG HTC LLD Sbjct: 101 GRTATAISAGFLHTCALLDNGSIKCWGYNNAGQL--GLGDTSSRGDGPGEMGDTLPAITLGTGRTATAISVGGIHTCALLD 179
BLAST of mRNA_F-serratus_M_contig102.259.1 vs. uniprot
Match: A0A831ZGI9_9GAMM (Uncharacterized protein n=1 Tax=Crenotrichaceae bacterium TaxID=2268193 RepID=A0A831ZGI9_9GAMM) HSP 1 Score: 92.0 bits (227), Expect = 5.180e-19 Identity = 45/89 (50.56%), Postives = 60/89 (67.42%), Query Frame = 2 Query: 104 EGEVADEIALG-------REHTCVLLSSGDVKCFGYNDKGQLLIGQGDTVSRGELPNQLGDDLPAIDLGTGASAVQVTVGCDHTCVLLD 349 +G A +IA+G R H C LL +G VKC+G N GQL GQGDT RG+ PN++GD+LPA+DLG G +A+++T G HTC +LD Sbjct: 804 QGRSAVQIAIGSYYGDDIRAHVCALLDNGSVKCWGDNTWGQL--GQGDTEDRGDEPNEMGDNLPAVDLGRGRTALKITAGASHTCAILD 890
BLAST of mRNA_F-serratus_M_contig102.259.1 vs. uniprot
Match: A0A0K1E936_CHOCO (Uncharacterized protein n=1 Tax=Chondromyces crocatus TaxID=52 RepID=A0A0K1E936_CHOCO) HSP 1 Score: 91.3 bits (225), Expect = 8.990e-19 Identity = 44/81 (54.32%), Postives = 55/81 (67.90%), Query Frame = 2 Query: 107 GEVADEIALGREHTCVLLSSGDVKCFGYNDKGQLLIGQGDTVSRGELPNQLGDDLPAIDLGTGASAVQVTVGCDHTCVLLD 349 GE+A IA G HTC LL+ G +KC+G N G+L G GDT RG+ P ++GD LPA+DLGTG +A +TVG H C LLD Sbjct: 229 GELAVAIAAGGSHTCALLAGGSIKCWGSNSFGEL--GLGDTAHRGDEPGEMGDALPAVDLGTGRTATALTVGYRHACALLD 307
BLAST of mRNA_F-serratus_M_contig102.259.1 vs. uniprot
Match: A0A848LYD2_9DELT (Uncharacterized protein n=1 Tax=Pyxidicoccus fallax TaxID=394095 RepID=A0A848LYD2_9DELT) HSP 1 Score: 90.5 bits (223), Expect = 1.440e-18 Identity = 43/82 (52.44%), Postives = 54/82 (65.85%), Query Frame = 2 Query: 104 EGEVADEIALGREHTCVLLSSGDVKCFGYNDKGQLLIGQGDTVSRGELPNQLGDDLPAIDLGTGASAVQVTVGCDHTCVLLD 349 +G A +A G HTC LL G VKC+G N GQL G GDT +RG+ P +LGD LPA+DLG G +A+ + G +HTC LLD Sbjct: 336 KGRTAVAVAAGEAHTCALLDRGTVKCWGRNAHGQL--GLGDTDTRGDTPGELGDALPAVDLGKGRTAIALAAGAEHTCALLD 415
BLAST of mRNA_F-serratus_M_contig102.259.1 vs. uniprot
Match: A0A4U1HUB6_9DELT (DUF4215 domain-containing protein n=1 Tax=Polyangium aurulentum TaxID=2567896 RepID=A0A4U1HUB6_9DELT) HSP 1 Score: 90.5 bits (223), Expect = 1.760e-18 Identity = 44/81 (54.32%), Postives = 55/81 (67.90%), Query Frame = 2 Query: 107 GEVADEIALGREHTCVLLSSGDVKCFGYNDKGQLLIGQGDTVSRGELPNQLGDDLPAIDLGTGASAVQVTVGCDHTCVLLD 349 G A IA G HTC LL+ G VKC+G N GQL G GDT +RG+ P ++G+ LPA+ LGTG +AV + G +HTCVLLD Sbjct: 479 GGQAKAIAAGGAHTCALLTDGSVKCWGANASGQL--GLGDTAARGDEPGEMGELLPAVQLGTGKTAVAIAAGAEHTCVLLD 557
BLAST of mRNA_F-serratus_M_contig102.259.1 vs. uniprot
Match: A0A7C1YRK2_9ACTN (Uncharacterized protein n=1 Tax=Acidimicrobiales bacterium TaxID=2201156 RepID=A0A7C1YRK2_9ACTN) HSP 1 Score: 90.1 bits (222), Expect = 2.360e-18 Identity = 42/81 (51.85%), Postives = 55/81 (67.90%), Query Frame = 2 Query: 107 GEVADEIALGREHTCVLLSSGDVKCFGYNDKGQLLIGQGDTVSRGELPNQLGDDLPAIDLGTGASAVQVTVGCDHTCVLLD 349 G A IA G+++TC LL G VKC+G N GQL GQG+T G+ P ++GD+LPA+DLGTG +A ++ G HTC LLD Sbjct: 168 GRTATAIAAGQQYTCALLDDGTVKCWGNNSSGQL--GQGNTDDIGDNPGEMGDNLPAVDLGTGRTATAISAGSSHTCALLD 246
BLAST of mRNA_F-serratus_M_contig102.259.1 vs. uniprot
Match: A0A4Q5ZUK8_9DELT (Uncharacterized protein (Fragment) n=1 Tax=Myxococcaceae bacterium TaxID=2484252 RepID=A0A4Q5ZUK8_9DELT) HSP 1 Score: 89.7 bits (221), Expect = 2.550e-18 Identity = 44/79 (55.70%), Postives = 54/79 (68.35%), Query Frame = 2 Query: 113 VADEIALGREHTCVLLSSGDVKCFGYNDKGQLLIGQGDTVSRGELPNQLGDDLPAIDLGTGASAVQVTVGCDHTCVLLD 349 + D I G H+CV+LSSG VKC+G ND+GQL G GDT+SRG+ Q+GD LPA+DLG G A V G HTC LL+ Sbjct: 39 LVDAITAGFGHSCVVLSSGAVKCWGQNDRGQL--GLGDTISRGDKTGQMGDALPAVDLGAGIEATAVAAGFWHTCALLE 115
BLAST of mRNA_F-serratus_M_contig102.259.1 vs. uniprot
Match: A0A835T094_9CHLO (Uncharacterized protein n=1 Tax=Chlamydomonas schloesseri TaxID=2026947 RepID=A0A835T094_9CHLO) HSP 1 Score: 89.0 bits (219), Expect = 6.470e-18 Identity = 42/81 (51.85%), Postives = 55/81 (67.90%), Query Frame = 2 Query: 107 GEVADEIALGREHTCVLLSSGDVKCFGYNDKGQLLIGQGDTVSRGELPNQLGDDLPAIDLGTGASAVQVTVGCDHTCVLLD 349 G A I+ G +TC LL +G VKC+G+ND GQL G GDT RG+ P ++GD LPA++LGTG +A ++ G HTC LLD Sbjct: 1806 GRTATAISAGSRYTCALLDNGSVKCWGWNDDGQL--GLGDTSRRGDGPGEMGDTLPAVELGTGRTATAISAGGWHTCALLD 1884
BLAST of mRNA_F-serratus_M_contig102.259.1 vs. uniprot
Match: A0A150PNJ9_SORCE (Uncharacterized protein n=2 Tax=Sorangium cellulosum TaxID=56 RepID=A0A150PNJ9_SORCE) HSP 1 Score: 88.6 bits (218), Expect = 8.580e-18 Identity = 43/81 (53.09%), Postives = 54/81 (66.67%), Query Frame = 2 Query: 107 GEVADEIALGREHTCVLLSSGDVKCFGYNDKGQLLIGQGDTVSRGELPNQLGDDLPAIDLGTGASAVQVTVGCDHTCVLLD 349 G A IA G HTC +L + VKC+G N +GQL G GD RG+ PN++GDDLP +DLGTG +A + VG HTCV+LD Sbjct: 217 GRTAKAIAAGVSHTCAILDNDQVKCWGDNIEGQL--GLGDMDPRGDGPNEMGDDLPEVDLGTGRTAKAIAVGSGHTCVILD 295 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig102.259.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig102.259.1 >prot_F-serratus_M_contig102.259.1 ID=prot_F-serratus_M_contig102.259.1|Name=mRNA_F-serratus_M_contig102.259.1|organism=Fucus serratus male|type=polypeptide|length=74bp MTGDDPDEMGDDLVSVDLGTGGRGRGRDRARQGTHLRTAFVWGCQVLWVQback to top mRNA from alignment at F-serratus_M_contig102:63542..64163+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig102.259.1 ID=mRNA_F-serratus_M_contig102.259.1|Name=mRNA_F-serratus_M_contig102.259.1|organism=Fucus serratus male|type=mRNA|length=622bp|location=Sequence derived from alignment at F-serratus_M_contig102:63542..64163+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig102:63542..64163+ >mRNA_F-serratus_M_contig102.259.1 ID=mRNA_F-serratus_M_contig102.259.1|Name=mRNA_F-serratus_M_contig102.259.1|organism=Fucus serratus male|type=CDS|length=444bp|location=Sequence derived from alignment at F-serratus_M_contig102:63542..64163+ (Fucus serratus male)back to top |