mRNA_F-serratus_M_contig1346.2565.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig1346.2565.1 vs. uniprot
Match: A0A6H5KPI6_9PHAE (EF-hand domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KPI6_9PHAE) HSP 1 Score: 468 bits (1203), Expect = 7.470e-146 Identity = 292/634 (46.06%), Postives = 362/634 (57.10%), Query Frame = 1
Query: 985 AVARLKGDRDVPRFLRPVLLLLMLSVVAI--------------------------VLTRVGRGLGDLGPAVYAAGGVQVSEDVVDEIFERADKDKNGVIADEEIQYLVEGAGGALLDDASEIKAGVASVIKNLDGNEDHTLSRSDLLTYWKRLGSLLTVDEVAQWVVHAAQLPQDMADTFRSNTVTGYDFPELAANQGALLEQDLGVTRPAHRKVLVRSMKWKLWGMGEEPAAPKELRVTNASCGIVHLEWDLS-DSDCNLSFPVHKSVVQRALLGQEGEMVGGLETVMDGPERAFLDFTVRPGASYRYHLEVWNALGHSSPVETDIIVTTEDCVLLPPWWGWLWPDD-----------LDRSIGALIAALFAAVTIAAFLLS----------RRVRAGGSTE----------------GGAGRVSRGNRPRVRTEP------------LMASTVTSYDGVGVNGSLISASTV--GGGACSQRERRPVPGASLSSLS-KPVSQCSSKDWMKRSTSEGVRGTSGGAGNGKLSTSLAGVSGSGTREPVRAEASKAAVVESMRRQAAKRLM--SKRSSSVDREVCRVCHKEWRWFQL-KHTCGVCHRQFCGRRECGVAKHSVGACPVGGSCICARCL 2640
A + GDR+VPRFLRPV++LL LS++AI GPA YAAGGVQ+ E VVD+IFE ADKDKNGVI DEEIQYLVE AGG+ LDDASEI+AGVASVIKNLD N DH LSRSDL YW RLG+LLTVDE AQWV+HAAQLPQ++AD F +N VTGYDFPELAA QGALLEQDLG+TRPA ++ LVRSM+WKLWGMGEEPAAP LR T+++CG V LEWD + ++ LSFPVHK V++RALLG EGE GG TVM GP F D ++PGA+YRY L+ WNALGHS VE D++ ++EDC P W W +G L+ A V +A+ L + VR G S + R R+R +P + A+ V+ DG G S +V G RER L S S +PVS +K+ ++R++S+ RA S AA+ +S+RR+ AKR+M SS D++VC+ C KEWRW++ KHTC CH QFC R+ECG H+ GACPVGG+C+C+ CL
Sbjct: 3 AATKNSGDREVPRFLRPVMVLLTLSLLAIGGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLFGPAAYAAGGVQLPEAVVDDIFEHADKDKNGVIGDEEIQYLVERAGGSRLDDASEIEAGVASVIKNLDRNADHALSRSDLNVYWDRLGTLLTVDEAAQWVLHAAQLPQEVADAFVNNMVTGYDFPELAARQGALLEQDLGITRPAFKRNLVRSMQWKLWGMGEEPAAPAGLRATSSACGAVSLEWDQTCPANSELSFPVHKHVLRRALLGAEGERDGGWVTVMAGPGGTFFDAGLQPGAAYRYALQAWNALGHSGSVEVDVVASSEDCA--PGRTSWFWSPGGGXXXXXXXXXXXXXVGGLVVATAVTVAVASCLRALSXXXXXXXXXXVRRGASGDVVGSXXXXXXXXXXXXXXXXXXXRRESERMRQQPGAAITGTAGNSAMAAAAVSDRDGDKSRGGASSPKSVHSNGSGWGDRERAEPRTKMLGSGSTRPVSSRRTKERLRRASSDVSPPXX------XXXXXXXXXXXXXXXXLARAGVSSAAIGDSVRRERAKRMMMYGHSSSRDDKDVCKECGKEWRWYRRGKHTCCKCHEQFCDRKECGSHSHAFGACPVGGTCMCSSCL 628
BLAST of mRNA_F-serratus_M_contig1346.2565.1 vs. uniprot
Match: F0Y7Y4_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y7Y4_AURAN) HSP 1 Score: 171 bits (434), Expect = 6.070e-41 Identity = 153/488 (31.35%), Postives = 206/488 (42.21%), Query Frame = 1
Query: 1240 GGALLDDASEIKAGVASVIKNLDGNEDHTLSRSDLLTYWKRLGSLLTVDEVAQWVVHAAQLPQDMADTFRSNTVTGYDFPELA--ANQGALLEQDLGVTRPAHRKVLVRSMKWKLWGMGEEPAAPKELRVTN-ASCGIVHLEWDLSDSDCNLSFPVHKSVVQRALL--GQEGEMVGGLETVMDGPERAFLDFTVRPGASYRYHLEVWNALGHSSPVETDIIVTTEDCVLLPPWWGWLWPDDLDRSIGALIAALFAAVTIAAFLLSRRV---RAGGSTEGGAGRVSRGNRPRVRTEPLMASTVTSYDGVGVNGSLISASTVGGGACSQRERRPVPGASLSSL------------SKPVSQCSSKDWMKRSTSEGVRGTSGGAGNGKLSTSLAGVSGSGTREPVRAEASKAAVVESMRRQAAKRLMSKRSSSVDREVCRVCHKEW-RWFQLKHTCGVCHRQFCGRRECGVAKHS-VGACPVGGSCICARC 2637
GG +LD A+EI GVAS+ +N D + D LS +D+ YWK LGSLL+V EVA WV HA QLP+D+AD F V+GYDF ELA ++ L+ ++GV R L R+M+ +L G+G+ PA+P L + A C HL W +D FP HK V++R G E+VG DG F D +RPG Y Y + WNA+G + + G + ++ L + L +AV + LLS V A + GAG P R + VT Y + L+ +G + R PG S +L S P + SS + RS +S AG G P A C C K + ++ +H C VC FC R CGV KHS + CPVG C CARC
Sbjct: 105 GGHVLDSAAEIADGVASIFENADADADAQLSATDMRAYWKALGSLLSVREVAAWVEHAVQLPRDIADKFVDAGVSGYDFAELARDVSERGALKTEVGVRTQRQRATLARAMRMRLTGVGDPPASPAPLSILGGAKCTSAHLAWTAADGG---GFPTHKYVLERRAKREGMAWEVVG------DGYFHEFRDERLRPGVGYDYRVAAWNAIGRGPYATASASSAQREACDPLEYLGAM-------ALAPLFSLLRSAVFLGQLLLSGIVLFLAALRLVDAGAGDAD--YHPVFRALWTLCRVVTDYVPFARDLLLLVDPALGRVEVPELRERRTPGESDHALVGTSPATLPPEMSAPARRASSLNRRSRSPP-------------LTRSSSAGSLGDDRERPSDA------------------------------ACSQCGKPFITGYRTRHYCYVCAASFCKR--CGVVKHSNMVTCPVGARCACARC 529
BLAST of mRNA_F-serratus_M_contig1346.2565.1 vs. uniprot
Match: A0A7S4V3N0_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4V3N0_9STRA) HSP 1 Score: 166 bits (421), Expect = 1.670e-38 Identity = 92/271 (33.95%), Postives = 139/271 (51.29%), Query Frame = 1
Query: 1168 FERADKDKNGVIADEEI-QYLVEGAGGALLDDASEIKAGVASVIKNLDGNEDHTLSRSDLLTYWKRLGSLLTVDEVAQWVVHAAQLPQDMADTFRSNTVTGYDFPELAANQGALLEQDLGVTRPAHRKVLVRSMKWKLWGMGEEPAAPKELRVTNASCGIVHLEWDLSDSDCNLSFPVHKSVVQRALLG-QEGE------------------------------MVGGLETVMDGPERAFLDFTVRPGASYRYHLEVWNALGHSSPVETDI 1884
F D+D +G++ E+ +L E GG D +E++ GV +++ LD N D L +SD+ YWK L SLL DEVA WVVHA QLP+ + + FR N VTGYDFPEL N G + +LG+ R + RK +VR + ++ G+G P P E++ SC V++ WD S ++ FPVH ++R +G +G+ + T+ G E F+D + G +Y Y ++ WN++G S+ DI
Sbjct: 141 FSSVDEDGDGMLEPPEVANFLRESIGGTAFDTQAEVETGVNKIMEKLDRNHDLGLDKSDVEAYWKHLESLLNADEVADWVVHAVQLPEYLGNIFRENMVTGYDFPELVENDGEAIRTELGIERSSFRKKIVRHIHARMLGIGSTPTIPSEIKHKLESCSTVNISWDRSTAE---GFPVHSYRIKRRAVGLHDGDGPRKVITLDAGPGTHHMVNSPSNVQSLSLPLASDWATIYVGGESEFVDSGLELGHNYVYRVQAWNSVGRSAWATVDI 408
BLAST of mRNA_F-serratus_M_contig1346.2565.1 vs. uniprot
Match: A0A7S2KT34_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2KT34_9STRA) HSP 1 Score: 149 bits (377), Expect = 3.590e-33 Identity = 92/296 (31.08%), Postives = 139/296 (46.96%), Query Frame = 1
Query: 1180 DKDKNGVIADEEIQYLVEGA-GGALLDDASEIKAGVASVIKNLDGNEDHTLSRSDLLTYWKRLGSLLTVDEVAQWVVHAAQLPQDMADTFRSNTVTGYDFPELAANQGALLEQDLGVTRPAHRKVLVRSMKWKLWGMGEEPAAPKELRVTNASCGIVHLEWDLSDSDCNLSFPVHKSVVQRALLGQEGEMVGGLE--------------------------------------------------TVMDGPERAFLDFTVRPGASYRYHLEVWNALGHSSPVETDIIVTTE--DCV 1908
D +++GV+ E+ + + GG+ D +E+ V ++ LD N+D L SD+ ++WK+L S+LTVDEV WV++A QLP+ +A+TF ++VTGYDFPEL N G + +LG+ + + RK L+RS+ KL G+G P P + SC +V+L W +SFPVH VQR + Q L+ TV G + +FLD + Y Y L+ WN +GHS DI + + DC+
Sbjct: 127 DTNRDGVVKPNEMANFIRNSIGGSAFDTETEVNFEVERIMGELDQNQDENLDLSDVFSHWKQLESVLTVDEVKDWVLYAVQLPEKVANTFVEHSVTGYDFPELIENDGDAMRVELGIEKQSFRKKLLRSIHAKLLGIGSVPTTPPSFKHNLESCSVVNLTWK---KPAAISFPVHSYRVQRRAVSQRRPTRNNLDFCEEKRNEIDAVQDIFGEGKCNTYLSDKEAHEQNDKFISKEYSASSADWVTVYIGVDTSFLDSNLEHDHKYVYRLQAWNPIGHSPWATRDIYSSLKRSDCL 419
BLAST of mRNA_F-serratus_M_contig1346.2565.1 vs. uniprot
Match: B8C5W8_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C5W8_THAPS) HSP 1 Score: 149 bits (376), Expect = 1.310e-32 Identity = 87/263 (33.08%), Postives = 135/263 (51.33%), Query Frame = 1
Query: 1144 SEDVVDEIFERADKDKNGVIADEEI-QYLVEGAGGALLDDASEIKAGVASVIKNLDGNEDHTLSRSDLLTYWKRLGSLLTVDEVAQWVVHAAQLPQDMADTFRSNTVTGYDFPELAANQGALLEQDLGVTRPAHRKVLVRSMKWKLWGMGEEPAAPKELRVTNASCGIVHLEWDLSDSDCNLSFPVHKSVVQRALLG-------QEGEM---------------VGGLETVMDGPERAFLDFTVRPGASYRYHLEVWNALGHS 1863
S++ D F D D +G++ EE+ +L + GG+ D S + V++V+K LD N D + SD+L YW +L SLLT +EV++WVV+A QLP+ + F N +TGYDFPE+ N G +L +LG+ + + R +VR M+ ++ G+G P P + +C V W+ S + FPVH +QR + E M +TV G E F+D +V G +Y Y ++ WN++G S
Sbjct: 76 SDEASDTFFHSLDSDHDGILEPEEVASFLKDQIGGSQFDTQSAVDKEVSTVMKRLDQNHDG-IEMSDVLDYWMQLESLLTAEEVSEWVVYAVQLPKTVGKIFLENGITGYDFPEIVENGGEVLLNELGIDKTSFRNKIVRQMQARMLGIGSIPDKPTQFYYKLDNCKAVSFTWERSSARV---FPVHSYRIQRRAINLFENGSTNENNMPIANDFSMVTYPPVSTSDWKTVYVGGENEFVDSSVETGHNYIYRIQAWNSVGRS 334
BLAST of mRNA_F-serratus_M_contig1346.2565.1 vs. uniprot
Match: A0A7S3V9U2_9STRA (Hypothetical protein n=2 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3V9U2_9STRA) HSP 1 Score: 144 bits (363), Expect = 3.770e-31 Identity = 81/193 (41.97%), Postives = 111/193 (57.51%), Query Frame = 1
Query: 1168 FERADKDKNGVIADEE-IQYLVEGAGGALLDD-ASEIKAGVASVIKNLDGNEDHTLSRSDLLTYWKRLGSLLTVDEVAQWVVHAAQLPQDMADTFRSNTVTGYDFPELAANQGALLEQDLGVTRPAHRKVLVRSMKWKLWGMGEEPAAPKELRVTNASCGIVHLEWDLSDSDCNLSFPVHKSVVQRALLGQEG 1740
F D+D +G I E I +++E GG+ DD +E+K V ++KNLD N D L D+ +YW++L SLLTVDEVA WVVHA QLP + D R VTGYDFPEL + G L +L +T + R ++R M+ ++ G+G P P + T SC + L WD + +D FPVHK V R +G G
Sbjct: 221 FNFVDRDGDGKIRRPELIDFVMENIGGSDFDDEVNEVKPEVDRMMKNLDLNNDDGLDTGDVTSYWEKLESLLTVDEVADWVVHAVQLPSYIGDIVRDKHVTGYDFPELVEDNGKALVDELHITEKSFRTKIIRLMQARMLGIGSVPRKPSGIVATVESCEAIKLTWDRTLAD---GFPVHKYRVMRRTVGGGG 410
BLAST of mRNA_F-serratus_M_contig1346.2565.1 vs. uniprot
Match: A0A7S2CAD4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CAD4_9STRA) HSP 1 Score: 132 bits (333), Expect = 4.200e-31 Identity = 74/191 (38.74%), Postives = 108/191 (56.54%), Query Frame = 1
Query: 1159 DEIFERADKDKNGVIADEEIQYLVE--GAGGALLDDASEIKAGVASVIKNLDGNEDHTLSRSDLLTYWKRLGSLLTVDEVAQWVVHAAQLPQDMADTFRSNTVTGYDFPELAANQGALLEQDLGVTRPAHRKVLVRSMKWKLWGMGEEPAAPKEL--RVTNASCGIVHLEWDLSDSDCNLSFPVHKSVVQR 1719
DE F D D +G + + EI+ V G+ G +I++ V ++ +D N D LS ++ TY KR+G++LTV VA+WV+H QLP+++ + FRSN+VTGYDF EL + GA L D+G+TR HRK ++R+MK + G+G P P + SC + L+W S F VHK V R
Sbjct: 35 DEFFTTMDTDADGQVEEFEIREAVAAFGSDGGATK-VEDIESTVEDIMSRMDSNTDGLLSDEEIETYSKRIGAVLTVSAVAEWVIHGLQLPEEVGELFRSNSVTGYDFAELVEDDGAALGHDIGITRVVHRKKVLRAMKMLMTGVGNVPTTPSPFIPTIVPGSCETMELQWGRSQGR---GFNVHKYRVFR 221
BLAST of mRNA_F-serratus_M_contig1346.2565.1 vs. uniprot
Match: A0A7S1VXY7_9STRA (Hypothetical protein n=2 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S1VXY7_9STRA) HSP 1 Score: 142 bits (359), Expect = 4.440e-31 Identity = 81/255 (31.76%), Postives = 130/255 (50.98%), Query Frame = 1
Query: 1168 FERADKDKNGVIADEEIQYLVEGAGGALLDDASEIKAGVASVIKNLDGNEDHTLSRSDLLTYWKRLGSLLTVDEVAQWVVHAAQLPQDMADTFRSNTVTGYDFPELAANQGALLEQDLGVTRPAHRKVLVRSMKWKLWGMGEEPAAPKELRVTNASCGIVHLEWDLSDSDCNLSFPVHKSVVQRA---LLGQEGEMVGG--------------------LETVMDGPERAFLDFTVRPGASYRYHLEVWNALGHS 1863
F+ DKD +G I EE+ ++ G L + + + V +V+ LD N D+ L +D+ YW +L +LLT +EVA+W+V+A QLP + F ++VTGYDFPE+ N G +L DLG+++ + R +VR M+ ++ G+G P P + SC V L W+ + FPVH +QR L G + G +T+ G + F+D ++ G +Y Y ++ WN++G S
Sbjct: 111 FDSIDKDGDGQIEPEEVAMFLKNQIGEL-ETQQAVDSEVVTVMARLDQNHDNGLGMADMHEYWMQLETLLTAEEVAEWIVYAVQLPGSVGKMFLEHSVTGYDFPEIVENGGKILSDDLGISKSSFRNKIVRQMQARMLGIGGNPEMPSKFDFKLQSCNAVSLSWERATGRV---FPVHSYRIQRRGINLFGNTQAIENGGTTANGHGVYYSAAIGSNSDWKTIYVGNDLEFVDSSLETGHNYMYRIQAWNSVGKS 361
BLAST of mRNA_F-serratus_M_contig1346.2565.1 vs. uniprot
Match: D8LHW7_ECTSI (FYVE zinc finger protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHW7_ECTSI) HSP 1 Score: 140 bits (352), Expect = 9.650e-30 Identity = 91/286 (31.82%), Postives = 142/286 (49.65%), Query Frame = 1
Query: 1087 GRGLGDLGPAVYAAGGVQVSEDVVDEIFERADKDKNGVIADEEIQYLVEGAGGALLDDASEIKAGVASVIKNLDGNEDHTLSRSDLLTYWKRLGSLLTVDEVAQWVVHAAQLPQDMADTFRSNTVTGYDFPELAANQGALLEQDLGVTRPAHRKVLVRSMKWKLWGMGEEPAAPKELRVTNASCGIVHLEWDLSDSDCNLSFPVHKSVVQRALLGQEGEMVGGLETVMDGPERAFLDFTVRPGASYRYHLEVWNALGHSSPVETDIIVT------TEDCVLLPPWW 1926
G G GD + +G + + F D++ +GV+A+ EI+ V GG+ LDD SEI GV++V+ LD + D + +L ++ RLG +LTV+E A WV HA QLP+++A+ FRSN+++ YDFPEL + GA L DLG+ R RK +V++++ +L G+G+EP P ++H + LG G + +V F+D + PG +Y Y + WN +GHS + T+ L+ PWW
Sbjct: 118 GEGGGDARARGWQSGVRKPRQSETATFFNSLDENSDGVLAENEIREFVGYVGGSSLDDNSEILGGVSTVMGRLDTDSDKGIGLKELSSWINRLGPMLTVEEAADWVSHAVQLPREVAEAFRSNSISAYDFPELVEDNGAGL-YDLGIKRK-FRKRIVKAIEVRLLGLGDEPPLP-----------VLH---------------------PPSYLG--GGKADDVASVSGSSSFVFVDSGLSPGKTYVYRVRAWNLIGHSEAPTAHVTTPPVHSLWTKPWRLISPWW 367
BLAST of mRNA_F-serratus_M_contig1346.2565.1 vs. uniprot
Match: A0A7S1B4T7_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1B4T7_9STRA) HSP 1 Score: 136 bits (342), Expect = 3.760e-29 Identity = 87/264 (32.95%), Postives = 130/264 (49.24%), Query Frame = 1
Query: 1168 FERADKDKNGVIADEEIQYLV-EGAGGALLDDASEIKAGVASVIKNLDGNEDHTLSRSDLLTYWKRLGSLLTVDEVAQWVVHAAQLPQDMADTFRSNTVTGYDFPELAANQGALLEQDLGVTRPAHRKVLVRSMKWKLWGMGEEPAAPKELRVTNASCGIVHLEWDLSDSDCNLSFPVHKSVVQRALLGQ------------------------EGEMVGGLET-------VMDGPERAFLDFTVRPGASYRYHLEVWNALGHS 1863
F D D + I EE+ V + GG D EI++ V ++ K+LD N D +S D+ +W +L LLT DEVA+WV +A QLP+++A+TFR N VTG+DF EL N G LE+ LG+ + RK L+R +K ++ G+G P + ++ + SC V WD FPVH +QR + + E +V ++ V G + F+D + G SY Y ++ WNA+G S
Sbjct: 57 FSAVDTDHDDTIDLEELSNFVGKVIGGTQFDTPLEIQSEVNAMFKSLDLNHDKRISFKDVKEHWNKLECLLTADEVAEWVKYAVQLPENVANTFRDNAVTGFDFSELVVNNGEALERYLGIEKELFRKKLLRLIKARMLGVGTVPDSVLNIKHSVDSCSSVSFTWD---KPIARGFPVHSYRIQRRAIMKVPRFIAVDSTGAQNKSVDLDATPNESTVVAQIKLSDENWADVFIGADTEFVDTGLELGYSYIYRIQAWNAVGRS 317 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1346.2565.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig1346.2565.1 >prot_F-serratus_M_contig1346.2565.1 ID=prot_F-serratus_M_contig1346.2565.1|Name=mRNA_F-serratus_M_contig1346.2565.1|organism=Fucus serratus male|type=polypeptide|length=862bp MWGRKDFAVEEERQQLGCGSDISCGEEDAMPPSRSFSSRGVQVSPEYIRSback to top mRNA from alignment at F-serratus_M_contig1346:133321..140702- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig1346.2565.1 ID=mRNA_F-serratus_M_contig1346.2565.1|Name=mRNA_F-serratus_M_contig1346.2565.1|organism=Fucus serratus male|type=mRNA|length=7382bp|location=Sequence derived from alignment at F-serratus_M_contig1346:133321..140702- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig1346:133321..140702- >mRNA_F-serratus_M_contig1346.2565.1 ID=mRNA_F-serratus_M_contig1346.2565.1|Name=mRNA_F-serratus_M_contig1346.2565.1|organism=Fucus serratus male|type=CDS|length=5172bp|location=Sequence derived from alignment at F-serratus_M_contig1346:133321..140702- (Fucus serratus male)back to top |